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Volumn 180, Issue 17, 1998, Pages 4325-4331

Parallel and divergent genotypic evolution in experiment populations of Ralstonia sp.

Author keywords

[No Author keywords available]

Indexed keywords

2,4 DICHLOROPHENOXYACETIC ACID; PALINDROMIC DNA;

EID: 0031720920     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.180.17.4325-4331.1998     Document Type: Article
Times cited : (43)

References (49)
  • 1
    • 0002167330 scopus 로고
    • Population dynamics of transposable elements
    • D. E. Berg and M. M. Howe (ed.), ASM Press, Washington, D.C.
    • Ajioka, J. W., and D. L. Hartl. 1989. Population dynamics of transposable elements, p. 939-958. In D. E. Berg and M. M. Howe (ed.), Mobile DNA. ASM Press, Washington, D.C.
    • (1989) Mobile DNA , pp. 939-958
    • Ajioka, J.W.1    Hartl, D.L.2
  • 3
    • 0026010079 scopus 로고
    • Elements in microbial evolution
    • Arber, W. 1991. Elements in microbial evolution. J. Mol. Evol. 33:4-12.
    • (1991) J. Mol. Evol. , vol.33 , pp. 4-12
    • Arber, W.1
  • 4
    • 0027763438 scopus 로고
    • Evolution of prokaryotic genomes
    • Arber, W. 1993. Evolution of prokaryotic genomes. Gene 135:49-56.
    • (1993) Gene , vol.135 , pp. 49-56
    • Arber, W.1
  • 6
    • 1842406595 scopus 로고    scopus 로고
    • Bacterial interspersed mosaic elements (BIMES) are a major source of sequence polymorphism in Escherichia coli intergenic regions including specific associations with a new insertion sequence
    • Bachellier, S., J. M. Clement, M. Hofnung, and E. Gilson. 1997. Bacterial interspersed mosaic elements (BIMES) are a major source of sequence polymorphism in Escherichia coli intergenic regions including specific associations with a new insertion sequence. Genetics 145:551-562.
    • (1997) Genetics , vol.145 , pp. 551-562
    • Bachellier, S.1    Clement, J.M.2    Hofnung, M.3    Gilson, E.4
  • 7
    • 0029730953 scopus 로고    scopus 로고
    • Evolutionary adaptation to temperature. 5. Adaptive mechanisms and correlated responses in experimental lines of Escherichia coli
    • Bennett, A. F., and R. E. Lenski. 1996. Evolutionary adaptation to temperature. 5. Adaptive mechanisms and correlated responses in experimental lines of Escherichia coli. Evolution 50:493-503.
    • (1996) Evolution , vol.50 , pp. 493-503
    • Bennett, A.F.1    Lenski, R.E.2
  • 12
    • 0026723774 scopus 로고
    • Use of repetitive (repetitive extragenic palindromic and enterobacterial repetitive intergeneric consensus) sequences and the polymerase chain reaction to fingerprint the genomes of Rhizobium meliloti isolates and other soil bacteria
    • de Bruijn, F. 1992. Use of repetitive (repetitive extragenic palindromic and enterobacterial repetitive intergeneric consensus) sequences and the polymerase chain reaction to fingerprint the genomes of Rhizobium meliloti isolates and other soil bacteria. Appl. Environ. Microbiol. 58:2180-2187.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 2180-2187
    • De Bruijn, F.1
  • 13
    • 0021957751 scopus 로고
    • Genetic and physical map of the 2,4-dichlorophenoxyacetic acid degrative plasmid pJP4
    • Don, R. H., and J. M. Pemberton. 1985. Genetic and physical map of the 2,4-dichlorophenoxyacetic acid degrative plasmid pJP4. J. Bacteriol. 161: 466-468.
    • (1985) J. Bacteriol. , vol.161 , pp. 466-468
    • Don, R.H.1    Pemberton, J.M.2
  • 14
    • 0027429553 scopus 로고
    • DNA rearrangements and phenotypic switching in prokaryotes
    • Dybvig, K. 1993. DNA rearrangements and phenotypic switching in prokaryotes. Mol. Microbiol. 10:465-471.
    • (1993) Mol. Microbiol. , vol.10 , pp. 465-471
    • Dybvig, K.1
  • 16
    • 0030967906 scopus 로고    scopus 로고
    • TRAP transporters - A new family of periplasmic solute transport systems encoded by the dctPQM genes of Rhodobacter capsulatus and by homologs in diverse gram-negative bacteria
    • Forward, J. A., M. C. Behrendt, N. R. Wyborn, R. Cross, and D. J. Kelly. 1997. TRAP transporters - a new family of periplasmic solute transport systems encoded by the dctPQM genes of Rhodobacter capsulatus and by homologs in diverse gram-negative bacteria. J. Bacteriol. 179:5482-5493.
    • (1997) J. Bacteriol. , vol.179 , pp. 5482-5493
    • Forward, J.A.1    Behrendt, M.C.2    Wyborn, N.R.3    Cross, R.4    Kelly, D.J.5
  • 18
    • 0028030110 scopus 로고
    • Detecting selective sweeps in naturally occurring Escherichia coli
    • Guttman, D. S., and D. E. Dykhuizen. 1994. Detecting selective sweeps in naturally occurring Escherichia coli. Genetics 138:993-1003.
    • (1994) Genetics , vol.138 , pp. 993-1003
    • Guttman, D.S.1    Dykhuizen, D.E.2
  • 19
    • 0023376305 scopus 로고
    • Evolution of Escherichia coli during growth in a constant environment
    • Helling, R. B., C. N. Vargas, and J. Adams. 1987. Evolution of Escherichia coli during growth in a constant environment. Genetics 116:349-358.
    • (1987) Genetics , vol.116 , pp. 349-358
    • Helling, R.B.1    Vargas, C.N.2    Adams, J.3
  • 21
    • 0028934840 scopus 로고
    • Theoretical analysis of divergence in mean fitness between initially identical populations
    • Johnson, P. A., R. E. Lenski, and F. C. Hoppensteadt. 1995. Theoretical analysis of divergence in mean fitness between initially identical populations. Proc. R. Soc. Lond. Biol. Sci. 259:125-130.
    • (1995) Proc. R. Soc. Lond. Biol. Sci. , vol.259 , pp. 125-130
    • Johnson, P.A.1    Lenski, R.E.2    Hoppensteadt, F.C.3
  • 23
    • 0029943666 scopus 로고    scopus 로고
    • Genetic divergence and fitness convergence under uniform selection in experimental populations of bacteria
    • Korona, R. 1996. Genetic divergence and fitness convergence under uniform selection in experimental populations of bacteria. Genetics 143:637-644.
    • (1996) Genetics , vol.143 , pp. 637-644
    • Korona, R.1
  • 24
    • 0028598147 scopus 로고
    • Evidence for multiple adaptive peaks from populations of bacteria evolving in a structured habitat
    • Korona, R., C. H. Nakatsu, L. J. Forney, and R. E. Lenski. 1994. Evidence for multiple adaptive peaks from populations of bacteria evolving in a structured habitat. Proc. Natl. Acad. Sci. USA 91:9037-9041.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 9037-9041
    • Korona, R.1    Nakatsu, C.H.2    Forney, L.J.3    Lenski, R.E.4
  • 25
    • 0028929984 scopus 로고
    • Widespread protein sequence similarities: Origins of Escherichia coli genes
    • Labedan, B., and M. Riley. 1995. Widespread protein sequence similarities: origins of Escherichia coli genes. J. Bacteriol. 177:1585-1588.
    • (1995) J. Bacteriol. , vol.177 , pp. 1585-1588
    • Labedan, B.1    Riley, M.2
  • 26
    • 0000349496 scopus 로고    scopus 로고
    • Homologous recombination
    • F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), ASM Press, Washington, D.C.
    • Lloyd, R. G., and K. B. Low. 1996. Homologous recombination, p. 2236-2255. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, vol. 2. ASM Press, Washington, D.C.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology , vol.2 , pp. 2236-2255
    • Lloyd, R.G.1    Low, K.B.2
  • 27
    • 0029656003 scopus 로고    scopus 로고
    • Chromosomal duplications in bacteria, fruit flies, and humans
    • Lupski, J. R., J. R. Roth, and G. M. Weinstock. 1996. Chromosomal duplications in bacteria, fruit flies, and humans. Am. J. Hum. Genet. 58:21-27.
    • (1996) Am. J. Hum. Genet. , vol.58 , pp. 21-27
    • Lupski, J.R.1    Roth, J.R.2    Weinstock, G.M.3
  • 28
    • 0026710382 scopus 로고
    • Short, interspersed repetitive DNA sequences in prokaryotic genomes
    • Lupski, J. R., and G. M. Weinstock. 1992. Short, interspersed repetitive DNA sequences in prokaryotic genomes. J. Bacteriol. 174:4525-4529.
    • (1992) J. Bacteriol. , vol.174 , pp. 4525-4529
    • Lupski, J.R.1    Weinstock, G.M.2
  • 29
    • 0028065674 scopus 로고
    • Adaptive evolution of highly mutable loci in pathogenic bacteria
    • Moxon, E. R., P. B. Rainey, M. A. Nowak, and R. E. Lenski. 1994. Adaptive evolution of highly mutable loci in pathogenic bacteria. Curr. Biol. 4:24-33.
    • (1994) Curr. Biol. , vol.4 , pp. 24-33
    • Moxon, E.R.1    Rainey, P.B.2    Nowak, M.A.3    Lenski, R.E.4
  • 30
    • 3543015655 scopus 로고    scopus 로고
    • Unpublished data
    • Nakatsu, C. H. Unpublished data.
    • Nakatsu, C.H.1
  • 31
    • 3543013865 scopus 로고    scopus 로고
    • Nakatsu, C. H., and T. L. Marsh. GenBank accession no. AF067833
    • Nakatsu, C. H., and T. L. Marsh. GenBank accession no. AF067833.
  • 32
    • 0028034301 scopus 로고
    • Further examples of evolution by gene duplication revealed through DNA sequence comparisons
    • Ohta, T. 1994. Further examples of evolution by gene duplication revealed through DNA sequence comparisons. Genetics 138:1331-1337.
    • (1994) Genetics , vol.138 , pp. 1331-1337
    • Ohta, T.1
  • 33
    • 0025357079 scopus 로고
    • Organization and sequence analysis of the 2,4-dichlorophenol hydroxylase and dichlorocatechol oxidative operons of plasmid pJP4
    • Perkins, E. J., M. F. Gordon, O. Caceres, and P. F. Lurquin. 1990. Organization and sequence analysis of the 2,4-dichlorophenol hydroxylase and dichlorocatechol oxidative operons of plasmid pJP4. J. Bacteriol. 172:2351-2359.
    • (1990) J. Bacteriol. , vol.172 , pp. 2351-2359
    • Perkins, E.J.1    Gordon, M.F.2    Caceres, O.3    Lurquin, P.F.4
  • 34
    • 0002043965 scopus 로고    scopus 로고
    • Rearrangements of the bacterial chromosome: Formation and applications
    • F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), ASM Press, Washington, D.C.
    • Roth, J. R., N. Benson, T. Galitski, K. Haack, J. G. Lawrence, and L. Miesel. 1996. Rearrangements of the bacterial chromosome: formation and applications, p. 2256-2276. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, vol. 2. ASM Press, Washington, D.C.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology , vol.2 , pp. 2256-2276
    • Roth, J.R.1    Benson, N.2    Galitski, T.3    Haack, K.4    Lawrence, J.G.5    Miesel, L.6
  • 36
    • 0021895322 scopus 로고
    • Mechanisms of DNA reorganization in bacteria
    • Shapiro, J. A. 1985. Mechanisms of DNA reorganization in bacteria. Int. Rev. Cytol. 93:25-56.
    • (1985) Int. Rev. Cytol. , vol.93 , pp. 25-56
    • Shapiro, J.A.1
  • 37
    • 0027016162 scopus 로고
    • Natural genetic engineering in evolution
    • Shapiro, J. A. 1992. Natural genetic engineering in evolution. Genetica 86:99-111.
    • (1992) Genetica , vol.86 , pp. 99-111
    • Shapiro, J.A.1
  • 38
    • 0026350845 scopus 로고
    • Purification, characterization and nucleotide sequence of the periplasmic C4 dicarboxylate-binding protein (DctP) from Rhodobacter capsulatus
    • Shaw, J. G., M. J. Hamblin, and D. J. Kelly. 1991. Purification, characterization and nucleotide sequence of the periplasmic C4 dicarboxylate-binding protein (DctP) from Rhodobacter capsulatus. Mol. Microbiol. 5:3055-3062.
    • (1991) Mol. Microbiol. , vol.5 , pp. 3055-3062
    • Shaw, J.G.1    Hamblin, M.J.2    Kelly, D.J.3
  • 39
    • 0004249246 scopus 로고
    • W. H. Freeman, San Francisco, Calif.
    • Sokal, R. R., and F. J. Rohlf. 1981. Biometry, 2nd ed., p. 795-799. W. H. Freeman, San Francisco, Calif.
    • (1981) Biometry, 2nd Ed. , pp. 795-799
    • Sokal, R.R.1    Rohlf, F.J.2
  • 40
    • 0024438949 scopus 로고
    • Role of gene duplication in the adaptation of Salmonella typhimurium to growth on limiting carbon sources
    • Sonti, R. V., and J. R. Roth. 1989. Role of gene duplication in the adaptation of Salmonella typhimurium to growth on limiting carbon sources. Genetics 123:19-28.
    • (1989) Genetics , vol.123 , pp. 19-28
    • Sonti, R.V.1    Roth, J.R.2
  • 41
    • 0016700864 scopus 로고
    • Detection of specific sequences among DNA fragments separated by gel electrophoresis
    • Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503-517.
    • (1975) J. Mol. Biol. , vol.98 , pp. 503-517
    • Southern, E.M.1
  • 43
    • 0023191349 scopus 로고
    • Analysis, cloning, and high-level expression of 2,4-dichlorophenoxyacetic monooxygenase gene tfdA of Alcaligenes eutrophus JMP134
    • Streber, W. R., K. N. Timmis, and M. H. Zenk. 1987. Analysis, cloning, and high-level expression of 2,4-dichlorophenoxyacetic monooxygenase gene tfdA of Alcaligenes eutrophus JMP134. J. Bacteriol. 169:2950-2955.
    • (1987) J. Bacteriol. , vol.169 , pp. 2950-2955
    • Streber, W.R.1    Timmis, K.N.2    Zenk, M.H.3
  • 44
    • 0028833294 scopus 로고
    • Polyphasic characterization of a suite of bacterial isolates capable of degrading 2,4-D
    • Tonso, N. L., V. G. Matheson, and W. E. Holben. 1995. Polyphasic characterization of a suite of bacterial isolates capable of degrading 2,4-D. Microb. Ecol. 30:3-24.
    • (1995) Microb. Ecol. , vol.30 , pp. 3-24
    • Tonso, N.L.1    Matheson, V.G.2    Holben, W.E.3
  • 45
    • 0030009207 scopus 로고    scopus 로고
    • Long-term experimental evolution in Escherichia coli. 4. Targets of selection and the specificity of adaptation
    • Travisano, M., and R. E. Lenski. 1996. Long-term experimental evolution in Escherichia coli. 4. Targets of selection and the specificity of adaptation. Genetics 143:15-26.
    • (1996) Genetics , vol.143 , pp. 15-26
    • Travisano, M.1    Lenski, R.E.2
  • 46
    • 0028977087 scopus 로고
    • Experimental tests of the roles of adaptation, chance, and history in evolution
    • Travisano, M., J. A. Mongold, A. F. Bennett, and R. E. Lenski. 1995. Experimental tests of the roles of adaptation, chance, and history in evolution. Science 267:87-90.
    • (1995) Science , vol.267 , pp. 87-90
    • Travisano, M.1    Mongold, J.A.2    Bennett, A.F.3    Lenski, R.E.4
  • 47
    • 0026323259 scopus 로고
    • Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes
    • Versalovic, J., T. Koeuth, and J. R. Lupski. 1991. Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Res. 19:6823-6831.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 6823-6831
    • Versalovic, J.1    Koeuth, T.2    Lupski, J.R.3
  • 48
    • 0000907353 scopus 로고
    • The roles of mutation, inbreeding, crossbreeding and selection in evolution
    • Wright, S. 1932. The roles of mutation, inbreeding, crossbreeding and selection in evolution. Proc. Int. Cong. Genet. 1:356-366.
    • (1932) Proc. Int. Cong. Genet. , vol.1 , pp. 356-366
    • Wright, S.1
  • 49
    • 0022623953 scopus 로고
    • Evolved aniline catabolism in Acinetobacter calcoaceticus during continuous culture of river water
    • Wyndham, R. C. 1986. Evolved aniline catabolism in Acinetobacter calcoaceticus during continuous culture of river water. Appl. Environ. Microbiol. 51:781-789.
    • (1986) Appl. Environ. Microbiol. , vol.51 , pp. 781-789
    • Wyndham, R.C.1


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