Sequence analysis of porcine reproductive and respiratory syndrome virus of the American type collected from Danish swine herds

Archives of Virology

Volumn 143, Issue 9, 1998, Pages 1683-1700

  Madsen, K G ^a,b   Hansen, C M ^a   Madsen, E S ^a   Strandbygaard, B ^a   Botner A ^a   Sorensen K J ^a  

^a TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^b DANISH INSTITUTE OF AGRICULTURAL SCIENCES   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

DENMARK; GENE SEQUENCING; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SWINE; UNITED STATES; VIRUS INFECTION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; MOLECULAR SEQUENCE DATA; PHYLOGENY; PORCINE RESPIRATORY AND REPRODUCTIVE SYNDROME VIRUS; SWINE; VIRAL VACCINES;

PORCINE REPRODUCTIVE AND RESPIRATORY SYNDROME VIRUS; RNA VIRUSES; SUIDAE; SUS SCROFA;

EID: 0031666813     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s007050050409     Document Type: Article

References (40)

1. Balfe P, Simmonds P, Ludlam CA, Bishop JO, Brown AJL (1990) Concurrent evolution of human immunodeficiency virus type 1 in patients infected from the same source: rate of sequence change and low frequency of inactivating mutations. J Virol 64: 6 221-6 223
2. Benfield DA, Nelson E, Collins JE, Harris L, Goyal SM, Robison D, Christianson WT, Morrison RB, Gorcyca D, Chladek DW (1992) Characterisation of swine infertility and respiratory syndrome (SIRS) virus (isolate ATCC VR-2332). J Vet Diagn Invest 4: 127-133
3. Bøtner A, Nielsen J, Bille-Hansen V (1994) Isolation of reproductive and respiratory syndrome (PRRS) virus in a Danish swine herd and experimental infection of pregnant gilts with the virus. Vet Microbiol 40: 351-360
4. Bøtner A, Strandbygaard B, Sørensen KJ, Have P, Madsen KG, Madsen ES, Alexandersen S (1997) Appearance of acute PRRS-like symptoms in sow herds after vaccination with a modified live PRRS-vaccine. Vet Rec 141: 497-499
5. Cavanagh D (1997) Nidovirales: a new order comprising Coronaviridae and Arteriviridae. Arch Virol 142: 629-633
6. Chomczynski P, Sacchi N (1987) Single-step method of RNA isolation by acid-guanidinium-thiocyanate-phenol-chloroform extraction. Anal Biochem 162: 156-159
7. Christopher-Hennings J, Nelson EA (1995) Persistence of porcine reproductive and respiratory syndrome virus in serum and semen of adult boars. J Vet Diag Invest 7: 456-464
8. Christopher-Hennings J, Nelson EA, Nelson JK (1995) Detection of porcine reproductive and respiratory syndrome virus in boar semen by PCR. J Clin Microbiol 33: 1 730-1 734
9. Christopher-Hennings J, Nelson EA, Nelson JK, Benfield DA (1997) Effects of a modified-live virus vaccine against porcine reproductive and respiratory syndrome in boars. Am J Vet Res 58: 40-45
10. Collins JE, Benfield DA, Christianson WT, Harris L, Hennings JC, Shaw DP, Goyal SM, McCullough S, Morrison RB, Joo HS, Gorcyca DE, Chladek DW (1992) Isolation of swine infertility and respiratory syndrome virus (isolate ATCC VR-2332) in North America and experimental reproduction of the disease in gnotobiotic pigs. J Vet Diagn Invest 4: 117-126
11. Devereux J, Haeberli P, Smithies O (1984) A comprehensive set of sequence analysis programs for VAX. Nucleic Acids Res 12: 387-395
12. Felsenstein J (1993) PHYLIP (Phylogeny Interference Package): version 3.5c. Department of Genetics, University of Washington
13. Gorcyca D, Schlesinger K, Chladek D, Behan W (1995) RespPRRS: A new tool for the prevention and control of PRRS in pigs. Am Assoc Swine Pract 1995: 1-22
14. Gottschalck E, Alexandersen S, Storgaard T, Bloom M, Aasted B (1994) Sequence comparison of the non-structural genes of four different types of Aleutian mink disease parvovirus indicates an unusual degree of variability. Arch Virol 138: 213-231
15. Gilbert SA, Timoney PJ, McCollum WH, Deregt D (1997) Detection of equine arteritis virus in the semen of carrier stallions by using a sensitive nested PCR assay. J Clin Microbiol 35: 2 181-2 183
16. Higgins DG, Sharp PM (1988) Clustal: a package for performimg multiple sequence alignments on a microcomputer. Gene 73: 237-244
17. Kapur V, Elam MR, Pawlovich TM, Murtaugh MP (1996) Genetic variation in porcine reproductive and respiratory syndrome virus isolates in the midwestern United States. J Gen Virol 77: 1 271-1 276
18. Keffaber K (1989) Reproductive failure of unknown aetiology. AASP Newsletters 1: 1-10
19. Kim HS, Kwang J, Yoon IJ, Joo HS, Frey ML (1993) Enhanced replication of porcine reproductive and respiratory syndrome (PRRS) virus in a homogenous subpopulation of MA-104 cell line. Arch Virol 133: 477-483
20. Li W-H, Wu C-I, Luo C-C (1985) A new method for estimating synonymous and non-synonymous rates of nucleotide substitutions considering the relative likelihood of nucleotide and codon changes. Mol Biol Evol 2: 150-174
21. Mardassi H, Mounir S, Dea S (1994) Identification of major differences in the nucleocapsid genes of a Quebec strain and European strains of porcine reproductive and respiratory syndrome virus. J Gen Virol 75: 681-685
22. Meng XJ, Paul PS, Halbur PG (1994) Molecular cloning and nucleotide sequencing of the 3′-terminal genomic RNA of the porcine reproductive and respiratory syndrome virus. J Gen Virol 75: 1 795-1 801
23. Meng XJ, Paul PS, Halbur PG, Morozov I (1995) Sequence comparison of open reading frames 2 to 5 of low and high virulence United States isolates of porcine reproductive and respiratory syndrome virus. J Gen Virol 76: 3 181-3 188
24. Meng XJ, Paul PS, Halbur PG, Lum MA (1995) Phylogenetic analyses of the putative M (ORF6) and N (ORF7) genes of porcine reproductive and respiratory syndrome virus (PRRSV): implications for the existence of two genotypes of PRRSV in the U.S.A. and Europe. Arch Virol 140: 745-755
25. Meulenberg JJM, Hulst MM, de Meijer EJ, Moonen PLJM, den Besten A, de Kluyver EP, Wensvoort G, Moormann RJM (1993) Lelystad virus, the causative agent of porcine epidemic abortion and respiratory syndrom (PEARS), is related to LDV and EAV. Virology 192: 62-72
26. Morozov I, Meng XJ, Paul PS (1995) Sequence analysis of the open reading frames (ORF) 2 to 4 of a U.S. isolate of porcine reproductive and respiratory syndrome virus (PRRSV). Arch Virol 140: 1 313-1 319
27. Murtaugh MP, Elan MR, Kakach LT (1995) Comparison of the structural protein coding sequences of the VR-2332 and Lelystad virus strains of the PRRS virus. Arch Virol 140: 1451-1460
28. Myers TW, Gelfand DH (1991) Reverse transcription and DNA amplification by a Thermus thermophilus DNA polymerase. Biochemistry 30: 7 661-7 666
29. Pol JMA, Wagenaar F, Reus JEG (1997) Comparative morphogennesis of three PRRS virus strains. Vet Microbiol 55: 203-208
30. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425
31. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning, a laboratory manual. Cold Spring Harbor Laboratory Press, New York
32. Sanger F, Nicklen S, Coulson AR (1987) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5 463-5 467
33. Shin J, Torrison J, Choi CS, Gonzalez SM, Crabo BG, Molitor TW (1997) Monitoring of porcine reproductive and respiratory syndrome virus infection in boars. Vet Microbiol 44: 337-346
34. Simmonds P, Balfe P, Chistopher AL, Bishop JO, Brown AJL (1990) Analysis of sequence diversity in hypervariable regions of the external glycoprotein of human immunodeficiency virus type 1. J Virol 64: 5 840-5 850
35. Sørensen KJ, Bøtner A, Madsen ES, Strandbygaard B, Nielsen J (1997) Evaluation of a blocking Elisa for screening of antibodies against porcine reproductive and respiratory syndrome (PRRS) virus. Vet Microbiol 56: 1-8
36. Swenson SL, Hill HT, Zimmermann JJ (1994) Excretion of porcine reproductive and respiratory syndrome virus in semen after experimentally induced infection in boars. J Am Vet Med Assoc 204: 1 943-1 948
37. Timoney PJ, McCollum WH, Roberts AW, Murphy TW (1986) Demonstration of the carrier state in naturally acquired aquine arteritis virus infection in the stallion. Res Vet Sci 41: 279-280
38. Wensvoort G, Terpstra C, Pol JMA, ter Laak EA, Bloomraad M, de Kluyver EP, Kragten C, van Buiten L, den Besten A, Wagenar F, Broekhuijsen JM, Moonen PLJM, Zetstra T, de Boer EA, Tibben HJ, de Jong MF, van't Veld P, Groenland GJR, van Gennep JA, Voets MT, Verheijden JHM, Braamskamp J (1991) Mystery swine disease in the Netherlands: the isolation of Lelystad virus. Vet Q 13: 121-130
39. Wesley RD, Mengeling WL, Andreyev V, Lager KM (1996) Differentiation of vaccine (strain RespPRRS) and field strains of porcine reproductive and respiratory syndrome virus by restriction enzyme analysis. Am Assoc Swine Pract 1996: 141-143
40. Yeager MJ, Prieve T, Collins J (1993) Evidence for the transmission of porcine reproductive and respiratory syndrome (PRRS) virus in boar semen. Swine Health Prod 1: 5-9