Polymorphisms in Phytophthora infestans: Four mitochondrial haplotypes are detected after PCR amplification of DNA from pure cultures or from host lesions

Applied and Environmental Microbiology

Volumn 64, Issue 10, 1998, Pages 4007-4014

  Griffith, Gareth W ^a,b   Shaw, David S ^a  

^a BANGOR UNIVERSITY   (United Kingdom)

^b ABERYSTWYTH UNIVERSITY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL DNA; MITOCHONDRIAL DNA; RESTRICTION ENDONUCLEASE;

ARTICLE; CONTROLLED STUDY; DNA POLYMORPHISM; HAPLOTYPE; MITOCHONDRION; NONHUMAN; OOMYCETES; PLANT LEAF; POLYMERASE CHAIN REACTION; POTATO; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; TOMATO;

FUNGI; LYCOPERSICON ESCULENTUM; MYXOGASTRIA; OOMYCETES; PHYTOPHTHORA; PHYTOPHTHORA INFESTANS; SOLANUM TUBEROSUM;

EID: 0031663429     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.64.10.4007-4014.1998     Document Type: Article

References (36)

1. Andrivon, D., C. Beasse, and C. Laurent. 1994. Characterization of isolates of Phytophthora infestans collected in northwestern France from 1988 to 1992. Plant Pathol. 43:471-478.
2. Barnes, W. 1994. PCR amplification of up to 35kb DNA with high fidelity and high yield from bacteriophage templates. Proc. Natl. Acad. Sci. USA 91: 2216-2220.
3. Carter, D. A., S. A. Archer, K. W. Buck, D. S. Shaw, and R. C. Shattock. 1991. DNA polymorphism in Phytophthora infestans: the UK experience, p. 272-294. In J. A. Lucas, R. C. Shattock, D. S. Shaw, and L. R. Cooke (ed.), Phytophthora. Cambridge University Press, Cambridge, United Kingdom.
4. Carter, D. A., S. A. Archer, K. W. Buck, D. S. Shaw, and R. C. Shattock. 1990. Restriction fragment length polymorphisms of mitochondrial DNA of Phytophthora infestans. Mycol. Res. 94:1123-1128.
5. Chesnick, J. M., K. Tuxbury, A. Coleman, G. Burger, and B. F. Lang. 1996. Utility of the mitochondrial nad4l gene for algal and protistan phylogenetic analysis. J. Phycol. 32:452-456.
6. Day, J. P., and R. C. Shattock. 1997. Aggressiveness and other factors relating to displacement of populations of Phytophthora infestans in England and Wales. Eur. J. Plant Pathol. 103:379-391.
7. de Cock, A. W. A. M., P. Karlovsky, K.-D. Jahnke, and G. Bahnweg. 1996. Similarities in restriction fragment patterns of mitochondrial DNAs of Phytophthora species strongly depend on the restriction enzyme used due to heterogeneous base distribution and sequence conservation. Fungal Genet. Biol. 20:36-42.
8. de Cock, A. W. A. M., A. Neuvel, G. Bahnweg, J. C. J. M. de Cock, and H. H. Prell. 1992. A comparison of morphology, pathogenicity and restriction fragment patterns of mitochondrial DNA among isolates of Phytophthora porri Foister. Neth. J. Plant Pathol. 98:277-289.
9. Doyle, J. J., and J. L. Doyle. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19:11-15.
10. Drenth, A., S. B. Goodwin, W. E. Fry, and L. C. Davidse. 1993. Genotypic diversity of Phytophthora infestans in the Netherlands revealed by DNA polymorphisms. Phytopathology 83:1087-1092.
11. DuTeau, N. M., and J. F. Leslie. 1991. A simple, rapid procedure for the isolation of DNA for PCR from Gibberella fujikuroi (Fusarium section Liseola). Fungal Genet. Newsl. 38:72.
12. Flier, W. Personal communication.
13. Förster, H., T. G. Kinscherf, S. A. Leong, and D. P. Maxwell. 1988. Estimation of relatedness between Phytophthora species by analysis of mitochondrial DNA. Mycologia 80:466-478.
14. Förster, H., P. Oudemans, and M. D. Coffey. 1990. Mitochondrial and nuclear DNA diversity within six species of Phytophthora. Exp. Mycol. 14:18-31.
15. Fry, W. E., S. B. Goodwin, J. M. Matuszak, L. J. Spielman, and M. G. Milgroom. 1992. Population genetics and intercontinental migrations of Phytophthora infestans. Annu. Rev. Phytopathol. 30:107-129.
16. Fry, W. E., and S. B. Goodwin. 1997. Re-emergence of potato and tomato late-blight in the United States. Plant Dis. 81:1349-1357.
17. Gallegly, M. E., and J. Galindo. 1958. Mating types and oospores of Phytophthora infestans in nature in Mexico. Phytopathology 48:274-277.
18. Goodwin, S. B. 1991. DNA polymorphisms in Phytophthora infestans: the Cornell experience, p. 256-271. In J. A. Lucas, R. C. Shattock, D. S. Shaw, and L. R. Cooke (ed.), Phytophthora. Cambridge University Press, Cambridge, United Kingdom.
19. Goodwin, S. B., A. Drenth, and W. E. Fry. 1992. Cloning and genetic analyses of two highly polymorphic, moderately repetitive nuclear DNAs from Phytophthora infestans. Curr. Genet. 22:107-115.
20. Goodwin, S. B., R. E. Schneider, and W. E. Fry. 1995. Use of cellulose-acetate electrophoresis for rapid identification of allozyme genotypes of Phytophthora infestans. Plant Dis. 79:1181-1185.
21. Goodwin, S. B., L. J. Spielman, J. M. Matuszak, S. N. Bergeron, and W. E. Fry. 1992. Clonal diversity and genetic differentiation of Phytophthora infestans populations in northern and central Mexico. Phytopathology 82:955-961.
22. Goodwin, S. B. 1997. The population genetics of Phytophthora. Phytopathology 87:462-473.
23. Griffith, G. W., R. Snell, and D. S. Shaw. 1995. Late blight (Phytophthora infestans) on tomato in the tropics. Mycologist 9:87-89.
24. Kato, M., E. S. Mizubuti, S. B. Goodwill, and W. E. Fry. 1997. Sensitivity to protectant fungicides and pathogenic fitness of clonal lineages of Phytophthora infestans in the United States. Phytopathology 87:973-978.
25. Klimczak, L. J., and H. H. Prell. 1984. Isolation and characterisation of mitochondrial DNA of the oomycetous fungus Phytophthora infestans. Curr. Genet. 8:323-326.
26. Koh, Y. J., S. B. Goodwin, A. T. Dyer, B. A. Cohen, A. Ogoshi, N. Sato, and W. E. Fry. 1994. Migration and displacements of Phytophthora infestans populations in East Asian countries. Phytopathology 84:922-927.
27. Lebreton, L., C. Laurent, and D. Andrivon. 1998. Evolution of Phytophthora infestans populations in the two most important potato production areas of France during 1992-96. Plant Pathol. 47:427-439.
28. Maleeva, J. Personal communication.
29. Möller, E. M., A. W. A. M. de Cock, and H. H. Prell. 1993. Mitochondrial and nuclear DNA restriction enzyme analysis of the closely related Phytophthora species P. infestans, P. mirabilis and P. phaseoli. J. Phytopathol. 139:309-321.
30. Paquin, B., M. J. Laforest, L. Forget, I. Roewer, Z. Wang, J. Longcore, and B. F. Lang. 1997. The fungal mitochondrial genome project: evolution of fungal mitochondrial genomes and their gene expression. Curr. Genet. 31: 380-395.
31. Sujkowski, L. S., S. B. Goodwin, A. T. Dyer, and W. E. Fry. 1994. Increased genotypic diversity via migration and possible occurrence of sexual reproduction of Phytophthora infestans in Poland. Phytopathology 84:201-207.
32. Tooley, P. W. 1988. Use of uncontrolled freezing for liquid nitrogen storage of Phytophthora species. Plant Dis. 72:680-682.
33. Tooley, P. W., B. A. Bunyard, M. M. Carras, and E. Hatziloukas. 1997. Development of PCR primers from internal transcribed spacer region 2 for detection of Phytophthora species infecting potatoes. Appl. Environ. Microbiol. 63:1467-1475.
34. Tooley, P. W., and C. D. Therrien. 1987. Cytophotometric determination of the nuclear DNA content of 23 Mexican and 18 non-Mexican isolates of Phytophthora infestans. Exp. Mycol. 11:19-26.
35. Trout, C. L., J. B. Ristaino, M. Madritch, and T. Wangsomboondee. 1997. Rapid detection of Phytophthora infestans in late blight-infected potato and tomato using PCR. Plant Dis. 81:1042-1048.
36. Whittaker, S. L., S. J. Assinder, and D. S. Shaw. 1994. Inheritance of mitochondrial DNA in Phytophthora infestans. Mycol. Res. 98:569-575.