An Alteration in the Structure of the Minor Groove of Duplex DNA Induced by the Formation of an Intermolecular d(GA)n:d(GA)n·d(TC)n Triplex

Molecules and Cells

Volumn 7, Issue 5, 1997, Pages 641-647

  Kim, Moon Gyo ^a,b   Daniel Camerini Otero, R ^a  

^a NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES   (United States)

^b NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; CYTOSINE; DIVALENT CATION; DNA; GUANINE; HETERODUPLEX; MAGNESIUM; PURINE DERIVATIVE; PYRIMIDINE DERIVATIVE; THYMINE; TRIPLEX DNA; WATER;

ARTICLE; CHEMISTRY; CONFORMATION; DNA BASE COMPOSITION; DNA FOOTPRINTING; DNA METHYLATION; METABOLISM; PH;

ADENINE; BASE COMPOSITION; CATIONS, DIVALENT; CYTOSINE; DNA; DNA FOOTPRINTING; DNA METHYLATION; GUANINE; HYDROGEN-ION CONCENTRATION; MAGNESIUM; NUCLEIC ACID CONFORMATION; NUCLEIC ACID HETERODUPLEXES; PURINES; PYRIMIDINES; THYMINE; WATER;

EID: 0031592823     PISSN: 10168478     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (42)

1. Berman, H. M. (1991) Curr. Opin. Struc. Biol. 1, 423-427.
2. Cheng, Y.-K., and Pettitt, B. M. (1992) Prog. Biophys. Mol. Biol. 58, 225-257.
3. Camerini-Otero, R. D., and Hsieh, P. (1993) Cell 73, 1-7.
4. Camerini-Otero, R. D., and Hsieh, P. (1995) Annu. Rev. Genet. 29, 509-502.
5. Durand, M., Thuong, N. T., and Maurizot, J. C. (1992) J. Biol. Chem. 267, 24394-24399.
6. Evans, T., and Efstratiadis, A. (1986) J. Biol. Chem. 261, 14771-14780.
7. Fesenfeld, G., Davis, D. R., and Rich, A. (1957) J. Am. Chem. Soc. 79, 2023-2024.
8. Francois, J. C., Behmoras, T. S., and Helene, C. (1988) Nucleic Acids Res. 16, 11431-11440.
9. Frank-Kameneskii, M., and Mirkin, S. (1995) Annu. Rev. Biochem. 64, 65-95.
10. Giovannangeli, C., Doan, T. L., and Helene, C. (1990) Nature 344, 358-360.
11. Griffin, L. C., and Dervan, P. B. (1989) Science 245, 967-971.
12. Han, H., and Dervan, P. (1993) Proc. Natl. Acad. Sci. USA 90, 3806-3810.
13. Helene, C. (1991) Anti-Cancer Drug Design 6, 569-584.
14. Jeffrey, G. A. and Sanenger, W. (1991) in Hydrogen Bonding in Biological Structures, Springer-Verlag, New York.
15. Karren, P., Hjelmgren, T., and Lindahl, T. (1982) Nature 296, 770-773.
16. Kim, M. G., Zhurkin, V. B., Camerini-Otero, C. S., and Camerini-Oter, R. D. (1994) in Structural Biology: The State of the Art, Proc. 8th Converation (Sarma, R. H., and Sarma, M. H., eds) pp. 67-74, Adenine, New York.
17. Kim, M. G., Zhurkin, V. B., Jernigan, R. L., and Cameriniotero, R. D. (1995) J. Mol. Biol. 247, 874-889
18. Kiyama, R., and Camerini-Otero, R. D. (1991) Proc. Natl. Acad. Sci. USA 88, 10450-10454.
19. Kohwi, Y., and Kohwi-Shigematsu, T. (1988) Proc. Natl. Acad. Sci. USA 85, 3781-3785.
20. Kohwi, Y., and Pachenko, Y. (1993) Genes Dev. 7, 1766-1778.
21. Kuwabara, M. D., and Sigman, D. S. (1987) Biochemistry 26, 7234-7238.
22. Lawley, P. D., and Brooks, P. (1963) Biochem. J. 89, 127-138.
23. Maher, L. J., III, Wold, B., and Dervan, P. B. (1989) Science 245, 725-730.
24. Maher, L. J., III, Wold, B., and Dervan, P. B. (1991) Antisense Res. Devel. 1, 277-281.
25. Malkov, V. A., Voloshin, O. N., Soyfer, V. N., and Frank-Kameneskii, M. D. (1993) Nucleic Acids Res. 21, 585-591.
26. Manor, H., Rao, B. S., and Martin, R. G. (1988) J. Mol. Evol. 27, 96-101
27. Maxam, A. M., and Gilbert, W. (1977) Proc. Natl. Acad. Sci. USA 74, 560-564.
28. Mirkin, S., and Frank-Kameneskii, M. (1994) Annu. Rev. Biophys. Biomol. Struc. 23, 541-576.
29. Moser, H. E., and Dervan, P. B. (1987) Science 238, 645-650.
30. Noonberg, S. B., Francois, J.-C., Garesitier, T., and Helene, C. (1995) Nucleic Acids Res. 23, 956-19631.
31. Palecek, E. (1991) Crit. Rev. Biochem. Mol. Biol. 26, 151-226.
32. Perrouault, L., Asseline, U., Rivalle, C., Thuong, N. T., Bisagni, E., Radhakrishnan, I., and Patel, D. J. (1994) Biochemistry 33, 11405-11416.
33. Pulleyblank, D. E., Haniford, D. B., and Morgan, A. R. (1985) Cell 42, 271-280.
34. Radhakrishnan, I., and Patel, D. J. (1994) Biochemistry 33, 11405-11415.
35. Roberts, R. W., and Crothers, D. M. (1992) Science 258, 1463-1466.
36. Rooney, S. M., and Moore, P. D. (1995) Proc. Natl. Acad. Sci. USA 92, 2141-2144.
37. Saenger, W. (1984) Principles of Nucleic Acid Structure, Springer-Verlag, New York.
38. Saenger, W. (1987) Annu. Rev. Biophys. Biophys. Chem. 16, 93-114.
39. Sun, J.-S., Garestier, T., and Helene, C. (1996) Curr. Opin. Struc. Biol. 6, 327-333
40. Thomson, C. C., Brown, T. A., and McKnight, S. L. (1991) Science 253, 762-768.
41. Westhof, E. (1988) Annu. Rev. Biophys. Biophys. Chem. 17, 125-144.
42. Zhurkin, V. B., Raghunathan, G., Ulyanov, N. B., Camerini-Otero, R. D., and Jernigan, R. L. (1994) J. Mol. Biol. 239, 181-200.