Escape from X inactivation of two new genes associated with DXS6974E and DXS7020E

Genomics

Volumn 43, Issue 2, 1997, Pages 183-190

  Esposito, Teresa ^a   Gianfrancesco, Fernando ^a   Ciccodicola, Alfrede ^b   D'Esposito, Maurizio ^b   Nagaraja, Ramaiah ^c   Mazzarella, Richard ^c   D'Urso, Michele ^b   Forabosco, Antonino ^a  

^a UNIVERSITY OF MODENA AND REGGIO EMILIA   (Italy)

^b INSTITUTE OF GENETICS AND BIOPHYSICS ADRIANO BUZZATI TRAVERSO   (Italy)

^c WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA;

ARTICLE; CHROMOSOMAL LOCALIZATION; CHROMOSOME XP; GENE DOSAGE; GENE EXPRESSION; GENE MAPPING; HUMAN; HUMAN CELL; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; X CHROMOSOME INACTIVATION;

EID: 0031571126     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1997.4797     Document Type: Article

References (43)

1. Agulnik, A. I., Mitchell, M. J., Mattei, M.-G., Borsani, G., Avner, P. A., Lerner, J. L., and Bishop, C. E. (1994). A novel X gene with a widely transcribed Y-linked homologue escapes X-inactivation in mouse and human. Hum. Mol. Genet. 3: 879-884.
2. Alitalo, T., Francis, F., Kere, J., Lehrach, H., Schlessinger, D., and Willard, H. F. (1995). A 6 Mb YAC contig in Xp22.1-p22.2 spanning the DXS69E, XE59, GLRA2, PIGA, GRPR, CALB3, and PHKA2 genes. Genomics 25: 691-700.
3. Altschul, S. F., Gish, W., Miller, W., Meyers, E. W., and Lipman, D. J. (1990). Basic local alignment search tool. J. Mol. Biol. 215: 403-410.
4. Antonacci, R., Marzella, R., Finelli, P., Lonoce, A., Forabosco, A., Archidiacono, N., and Rocchi, M.(1995). A panel of subchromosomal painting libraries representing over 300 regions of the human genome. Cytogenet. Cell Genet. 68: 25-32.
5. Auffray, C., Behar, G., Bois, F., Boucher, C., da Suva, C., Devignes, M. D., Duprat, S., Houlgatte, R., Jumeau, M. N., Lamy, B., Lorenzo, F., Mitchell, H., Mariage-Samson, R., Pietu, G., Pouliot, Y., Sebastiani-Kabaktchis, C., and Tessier, A. (1995). IMAGE: Integrated molecular analysis of the human genome and its expression. C. R. Acad. Sci. III 318: 263-272.
6. Blanchard, M. M., Taillon-Miller, P., and Nowotny, V. (1993). PCR buffer optimization with uniform temperature regimen to facilitate automation. PCR Methods Appl. 2: 234-240.
7. Brown, C. J., and Willard, H. F. (1990). Localization of a gene that escapes inactivation to the X chromosome proximal short arm: Implications for X inactivation. Am. J. Hum. Genet. 46: 273-279.
8. Brown, C. J., Flenniken, A. M., Williams, B. R., and Willard, H. F. (1990). X chromosome inactivation of the human TIMP gene. Nucleic Acids Res. 18: 4191-4195.
9. Brown, C. J., Ballabio, A., Rupert, J. L., Lafreniere, R. G., Grompe, M., Tonlorenzi, S., and Willard, H. F. (1991). A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome. Nature 349: 38-44.
10. Brown, C. J., and Willard, H. F. (1993). Molecular and genetic studies of human X chromosome inactivation. Adv. Dev. Biol. 2: 37-72.
11. Brown, C. J., Miller, A. P., Carrel, L., Rupert, J. L., Davies, K. E., and Willard, H. F. (1995). The DXS423E gene in Xp11.21 escapes X chromosome inactivation. Hum. Mol. Genet. 4: 251-255.
12. Carrel, L., Clemson, C. M., Dunn, J. M., Miller, A. P., Hunt, P.A., Lawrence, J. B., and Willard, H. F. (1996). X inactivation analysis and DNA methylation studies of the ubiquitin activating enzyme E1 and PCTAIRE-1 genes in human and mouse. Hum. Mol. Genet. 5: 391-401.
13. Chumakov, I., Rigault, P., Guillou, S., Ougen, P., Billaut, A., Guasconi, G., Gervy, P., LeGall, I., Soularue, P., Grinas, L., Bougueleret, L., Bellanné-Chantelot, C., Lacroix, B., Barillot, E., Gesnouin, P., Pook, S., Vaysseix, G., Frelat, G., Schmitz, A., Sambucy, J. L., Bosch, A., Estivill, X., Weissenbach, J., Vignal, A., Riethman, H., Cox, D., Patterson, D., Gardiner, K., Hattori, M., Sakaki, Y., Ichikawa, H., Ohki, M., le Paslier, D., Heilig, R., Antonarakis, S., and Cohen, D. (1992). Continuum of overlapping clones spanning the entire human chromosome 21q. Nature 359: 380-387.
14. D'Esposito, M., Mazzarella, R., Pengue, G., Jones, C., D'Urso, M., and Schlessinger, D. (1994). PCR-based immortalization and screening of hierarchical pools of cDNAs. Nucleic Acids Res. 22: 4806-4809.
15. D'Esposito, M., Ciccodicola, A., Gianfrancesco, F., Esposito, T., Flagiello, L., Mazzarella, R., Schlessinger, D., and D'Urso, M.(1996). A synaptobrevin-like gene in the Xq28 pseudoautosomal region undergoes X inactivation. Nature Genet. 13: 227-229.
16. Disteche, C. M. (1995). Escape from X inactivation in human and mouse. Trends Genet. 11: 17-22.
17. Ellison, J. W., Ramos, C., Yen, P. H., and Shapiro, L. J. (1992a). Structure and expression of the human pseudoautosomal gene XE7. Hum. Mol. Genet. 1: 691-696.
18. Ellison, J., Passage, M., Yu, L. C., Yen, P., Mohandas, T. K., and Shapiro, L. (1992b). Directed isolation of human genes that escape X inactivation. Somatic Cell Mol. Genet. 18: 259-268.
19. Fisher, E. M. C., Beer-Romero, P., Brown, L. G., Ridley, A., McNeil, J. A., Lawrence, J. B., Willard, H. F., Bieber, F. R., and Page, D.C. (1990). Homologous ribosomal protein genes on the human X and Y chromosomes: Escape from X inactivation and implications for Turner syndrome. Cell 63: 1205-1218.
20. Franco, B., Guioli, S., Pragliola, A., Incerti, B., Bardoni, B., Tonlorenzi, R., Carrozzo, R., Maestrini, E., Pieretti, M., Taillon-Miller, P., Brown, C. J., Willard, H. F., Lawrence, C., Persico, M. G., Camerino, G., and Ballabio, A. (1991). A gene deleted in Kallmann's syndrome shares homology with neural cell adhesion and axonal path-finding molecules. Nature 353: 529-536.
21. Franco, B., Meroni, G., Parenti, G., Levilliers, J., Bernard, L., Gebbia, M., Cox, L., Maroteaux, P., Sheffield, L., Rappold, G. A., Andria, G., Petit, C., and Ballabio, A. (1995). A cluster of sulfatase genes on Xp22.3: Mutations in chondrodysplasia punctata (CDPX) and implications for warfarin embryopathy. Cell 81: 15-25.
22. Gianfrancesco, F., Esposito, T., Ruini, L., Houlgatte, R., Nagaraja, R., D'Esposito, M., Rocchi, M., Auffray, C., Schlessinger, D., D'Urso, M., and Forabosco, A. (1997). Mapping of 59 EST gene markers in 31 intervals spanning the human X chromosome. Gene 167: 117-184.
23. Goodfellow, P., Pym, B., Mohandas, T., and Shapiro, L. J. (1984). The cell surface antigen locus, MIC2X, escapes X-inactivation. Am. J. Hum. Genet. 36: 777-782.
24. Jones, M. H., Furlong, R. A., Burkin, H., Chalmers, I. J., Brown, G. M., Khwaja, O., and Affara, N. A. (1996). The Drosophila developmental gene fat facets has a human homologue in Xp11.4 which escapes X-inactivation and has related sequences on Yq11.2. Hum. Mol. Genet. 5: 1695-1701.
25. Lennon, G., Auffray, C., Polymeropoulos, M., and Soares, M. B. (1996). The IMAGE Consortium: An integrated molecular analysis of genomes and their expression. Genomics 33: 151-152.
26. Lyon, M. F. (1961). Gene action in the X-chromosome of the mouse (Mus musculus L.). Nature 190: 372-373.
27. Lyon, M. F. (1996). Pinpointing the centre. Nature 379: 116-117.
28. Miller, A. P., Gustashaw, K., Wolff, D. J., Rider, S. H., Monaco, A. P., Eble, B., Schlessinger, D., Gorski, J. L., van Ommen, G.-J., Weissenbach, J., and Willard, H. F (1995). Three genes that escape X chromosome inactivation are clustered within a 6 Mb YAC contig and STS map in Xp11.21-11.22. Hum. Mol. Genet. 4: 731-739.
29. Mohandas, T., Geller, R. L., Yen, P. H., Rosendorff, J., Bernstein, R., Yoshida, A., and Shapiro, L.J. (1987). Cytogenetic and molecular studies on a recombinant human X chromosome: Implications for the spreading of X chromosome inactivation. Proc. Natl. Acad. Sci. USA 84: 4954-4958.
30. Nagaraja, R., Kere, J., MacMillan, S., Masisi, M. J., Johnson, D., Molini, B. J., Halley, G. R., Wein, K., Trusgnich, M., and Eble, B. (1994). Characterization of four human YAC libraries for clone size, chimerism, and X chromosome sequence representation. Nucleic Acids Res. 22: 3406-3411.
31. Nussbaum, R. L., Airhart, S. D., and Ledbetter, D. H. (1986). A rodent-human hybrid containing Xq24-qter translocated to a hamster chromosome expresses the Xq27 folate sensitive fragile site. Am. J. Med. Genet. 23: 457-466.
32. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989). "Molecular Cloning: A Laboratory Manual," Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
33. Schempp, W., and Meer, B. (1983). Cytologic evidence for three human X-chromosomal segments escaping inactivation. Hum. Genet. 63: 171-174.
34. Schiebel, K., Weiss, B., Wohrle, D., and Rappold, G. (1993). A human pseudoautosomal gene, ADP/ATP translocase, escapes X-inactivation whereas a homologue in Xq is subject to X-inactivation. Nature Genet. 3: 82-87.
35. Schneider-Gadicke, A., Beer-Romero, P., Brown, L. G., Nussbaum, R., and Page, D. C. (1989). ZFX has a gene structure similar to ZFY, the putative sex determinant, and escapes X inactivation. Cell 57: 1247-1258.
36. Simeone, A., Gulisano, M., Acampora, D., Stornaiuolo, A., Rambaldi, M., and Boncinelli, E. (1992). Two vertebrate homeobox genes related to the Drosophila empty spiracles gene are expressed in the embryonic cerebral cortex. EMBO J. 11: 2541-2550.
37. Skowronski, J., Fanning, T. G., and Singer, M. F. (1988). Unit-length Line-1 transcripts in human teratocarcinoma cells. Mol. Cell. Biol. 8: 1385-1397.
38. Slim, R., Levilliers, J., Ludecke, H.-J., Claussen, U., Nguyen, V. C., Gough, N. M., Horsthemke, B., and Petit, C. (1993). A human pseudoautosomal gene encodes the ANT3 ADP/ATP translocase and escapes inactivation. Genomics 16: 26-33.
39. Wu, J., Ellison, J., Salido, E., Yen, P., Mohandas, T., and Shapiro, L. J. (1994a). Isolation and characterization of XE169, a novel human gene that escapes X-inactivation. Hum. Mol. Genet. 3: 153-160.
40. Wu, J., Salido, E. C., Yen, P. H., Mohandas, T. K., Heng, H. H. Q., Tsui, L.-C., Park, J., Chapman, V. M., and Shapiro, L. J. (1994b). The murine Xe169 gene escapes X-inactivation like its human homologue. Nature Genet. 7: 491-496.
41. Yen, P. H., Allen, C., Marsh, B., Mohandas, T., Wang, N., Taggart, R. T., and Shapiro, L. J. (1987). Cloning and expression of steroid sulfatase cDNA and the frequent occurrence of deletions in STS deficiency: Implication for X-Y interchange. Cell 49: 443-454.
42. Yen, P. H., Ellison, J., Salido, E. C., Mohandas, T., and Shapiro, L. (1992). Isolation of a new gene from the distal short arm of the human X chromosome that escapes X-inactivation. Hum. Mol. Genet. 1: 47-52.
43. Zinn, A. R., Page, D. C., and Fisher, M. C. (1993). Turner syndrome: The case of the missing sex chromosome. Trends Genet. 9: 90-93.