메뉴 건너뛰기




Volumn 59, Issue 3, 1997, Pages 581-607

Links between maximum likelihood and maximum parsimony under a simple model of site substitution

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 0031149251     PISSN: 00928240     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02459467     Document Type: Article
Times cited : (224)

References (23)
  • 1
    • 0018002532 scopus 로고
    • Taxonomy with confidence
    • Cavender, J. A. 1978. Taxonomy with confidence. Mathematical Biosci. 40, 270-280.
    • (1978) Mathematical Biosci. , vol.40 , pp. 270-280
    • Cavender, J.A.1
  • 2
    • 0029919254 scopus 로고    scopus 로고
    • Inconsistency of evolutionary tree topology reconstruction methods when substitution rates vary across characters
    • Chang, J. T. 1996. Inconsistency of evolutionary tree topology reconstruction methods when substitution rates vary across characters. Mathematical Biosci. 134, 189-215.
    • (1996) Mathematical Biosci. , vol.134 , pp. 189-215
    • Chang, J.T.1
  • 3
    • 0004128472 scopus 로고
    • Cambridge: Cambridge University Press
    • Edwards, A. W. F. 1972. Likelihood. Cambridge: Cambridge University Press.
    • (1972) Likelihood
    • Edwards, A.W.F.1
  • 4
    • 38249000676 scopus 로고
    • Counting bichromatic evolutionary trees
    • Erdos, P. L. and L. A. Székely. 1993. Counting bichromatic evolutionary trees. Discrete Appl. Math. 47, 1-8.
    • (1993) Discrete Appl. Math. , vol.47 , pp. 1-8
    • Erdos, P.L.1    Székely, L.A.2
  • 6
    • 84959807796 scopus 로고
    • A probability model for inferring evolutionary trees
    • Farris, J. S. 1973. A probability model for inferring evolutionary trees. Systematic Zoology 22, 250-256.
    • (1973) Systematic Zoology , vol.22 , pp. 250-256
    • Farris, J.S.1
  • 7
    • 84959798530 scopus 로고
    • Cases in which parsimony or compatibility will be positively misleading
    • Felsenstein, J. 1978. Cases in which parsimony or compatibility will be positively misleading. Systematic Zoology 27, 401-410.
    • (1978) Systematic Zoology , vol.27 , pp. 401-410
    • Felsenstein, J.1
  • 8
    • 0001306645 scopus 로고
    • A likelihood approach to character weighting and what it tells us about parsimony and compatibility
    • Felsenstein, J. 1981. A likelihood approach to character weighting and what it tells us about parsimony and compatibility. Biological J. Linnean Soc. 16, 183-196.
    • (1981) Biological J. Linnean Soc. , vol.16 , pp. 183-196
    • Felsenstein, J.1
  • 9
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. 1971. Toward defining the course of evolution: minimum change for a specific tree topology. Systematic Zoology 20, 406-416.
    • (1971) Systematic Zoology , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 10
    • 0024547625 scopus 로고
    • On the maximum likelihood method for estimating molecular trees: Uniqueness of the likelihood point
    • Fukami, K. and Y. Tateno. 1989. On the maximum likelihood method for estimating molecular trees: uniqueness of the likelihood point. J. Molecular Evolution 28, 460-464.
    • (1989) J. Molecular Evolution , vol.28 , pp. 460-464
    • Fukami, K.1    Tateno, Y.2
  • 11
    • 0344430855 scopus 로고
    • Maximum likelihood inference of phylogenetic trees, with special reference to a Poisson process model of DNA substitution and to parsimony analyses
    • Goldman, N. 1990. Maximum likelihood inference of phylogenetic trees, with special reference to a Poisson process model of DNA substitution and to parsimony analyses. Systematic Zoology 39, 345-361.
    • (1990) Systematic Zoology , vol.39 , pp. 345-361
    • Goldman, N.1
  • 13
    • 0000084234 scopus 로고
    • A framework for the qualitative study of evolutionary trees
    • Hendy, M. D. and D. Penny. 1989. A framework for the qualitative study of evolutionary trees. Systematic Zoology 38, 297-309.
    • (1989) Systematic Zoology , vol.38 , pp. 297-309
    • Hendy, M.D.1    Penny, D.2
  • 14
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • H. N. Munro (Ed). New York: Academic Press
    • Jukes, T. H. and C. R. Cantor. 1969. Evolution of protein molecules. In Mammalian Protein Metabolism, H. N. Munro (Ed), pp. 21-132. New York: Academic Press.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 15
    • 0029935637 scopus 로고    scopus 로고
    • Evolution of chlorophyll and bacteriochlorophyll: The problem of invariant sites in sequence analysis
    • Lockhart, P. J., A. W. D. Larkum, M. A. Steel, P. J. Waddell and D. Penny. 1996. Evolution of chlorophyll and bacteriochlorophyll: the problem of invariant sites in sequence analysis. Proc. Natl. Acad. Sci. USA 93, 1930-1934.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 1930-1934
    • Lockhart, P.J.1    Larkum, A.W.D.2    Steel, M.A.3    Waddell, P.J.4    Penny, D.5
  • 16
    • 0029468058 scopus 로고
    • Calculating the probability distributions of ancestral states reconstructed by parsimony on phylogenetic trees
    • Maddison, W. P. 1995. Calculating the probability distributions of ancestral states reconstructed by parsimony on phylogenetic trees. Systematic Biol. 44, 474-481.
    • (1995) Systematic Biol. , vol.44 , pp. 474-481
    • Maddison, W.P.1
  • 17
    • 0001879933 scopus 로고
    • Molecular studies of evolution: A source of novel statistical problems
    • S. S. Gupta and J. Yackel (Eds). New York: Academic Press
    • Neyman, J. 1971. Molecular studies of evolution: A source of novel statistical problems. In Statistical Decision Theory and Related Topics, S. S. Gupta and J. Yackel (Eds), pp. 1-27. New York: Academic Press.
    • (1971) Statistical Decision Theory and Related Topics , pp. 1-27
    • Neyman, J.1
  • 18
    • 0001596085 scopus 로고
    • The role of models in reconstructing evolutionary trees
    • R. W. Scotland, D. J. Siebert and D. M. Williams (Eds), Systematics Association Special. Oxford: Clarendon Press
    • Penny, D., P. J. Lockhart, M. A. Steel and M. D. Hendy. 1994. The role of models in reconstructing evolutionary trees. In Models in Phylogeny Reconstruction, R. W. Scotland, D. J. Siebert and D. M. Williams (Eds), Systematics Association Special Vol. 52, pp. 211-230. Oxford: Clarendon Press.
    • (1994) Models in Phylogeny Reconstruction , vol.52 , pp. 211-230
    • Penny, D.1    Lockhart, P.J.2    Steel, M.A.3    Hendy, M.D.4
  • 19
    • 38249005155 scopus 로고
    • Decompositions of leaf-colored binary trees
    • Steel, M. A. 1993a. Decompositions of leaf-colored binary trees. Advances in Appl. Math. 14, 1-24.
    • (1993) Advances in Appl. Math. , vol.14 , pp. 1-24
    • Steel, M.A.1
  • 20
    • 38249005073 scopus 로고
    • Distributions on bicoloured binary trees arising from the principle of parsimony
    • Steel, M. A. 1993b. Distributions on bicoloured binary trees arising from the principle of parsimony. Discrete Appl. Math. 41, 245-261.
    • (1993) Discrete Appl. Math. , vol.41 , pp. 245-261
    • Steel, M.A.1
  • 21
    • 12044253706 scopus 로고
    • The maximum likelihood point for a phylogenetic tree is not unique
    • Steel, M. A. 1994. The maximum likelihood point for a phylogenetic tree is not unique. Systematic Biol. 43, 560-564.
    • (1994) Systematic Biol. , vol.43 , pp. 560-564
    • Steel, M.A.1
  • 22
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • D. M. Hillis, C. Moritz and B. K. Marble (Eds), ch. 11. Sinauer Associates
    • Swofford, D. L., G. J. Olsen, P. J. Waddell and D. M. Hillis. 1996. Phylogenetic inference. In Molecular Systematics, 2nd ed., D. M. Hillis, C. Moritz and B. K. Marble (Eds), ch. 11, pp. 407-514. Sinauer Associates.
    • (1996) Molecular Systematics, 2nd Ed. , pp. 407-514
    • Swofford, D.L.1    Olsen, G.J.2    Waddell, P.J.3    Hillis, D.M.4
  • 23
    • 0028136449 scopus 로고
    • Maximum likelihood with multiparameter models of substitution
    • Tillier, E. R. M. 1994. Maximum likelihood with multiparameter models of substitution. J. Molecular Evolution 39, 409-417.
    • (1994) J. Molecular Evolution , vol.39 , pp. 409-417
    • Tillier, E.R.M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.