New Rhizobium leguminosarum flavonoid-lnduced proteins revealed by proteome analysis of differentially displayed proteins

Molecular Plant-Microbe Interactions

Volumn 10, Issue 4, 1997, Pages 506-516

  Guerreiro, Nelson ^a   Redmond, John W ^a   Rolfe, Barry G ^a   Djordjevic, Michael A ^a  

^a AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

Author keywords

amino acid composition (AAC) analysis; nodulation genes; Rhizobium ChvE homologue; two dimensional gel electrophoresis

Indexed keywords

BACTERIA (MICROORGANISMS); RHIZOBIUM; RHIZOBIUM LEGUMINOSARUM; RHIZOBIUM LEGUMINOSARUM BV. TRIFOLII;

EID: 0031148601     PISSN: 08940282     EISSN: None     Source Type: Journal    
DOI: 10.1094/MPMI.1997.10.4.506     Document Type: Article

References (52)

1. Ardourel, M., Demont, N., Debelle, F. D., Maillet, F., Debilly, F., Prome, J. C., Denarie, J., and Truchet, G. 1994. Rhizobium meliloti lipooligosaccharide nodulation factors-Different structural requirements for bacterial entry into target root hairs and induction of plant symbiotic developmental responses. Plant Cell 6:1357-1374.
2. Bjellqvist, B., Ek, K., Righetti, P. G., Gianazza, E., Görg, A., Westermeier, R., and Postel, W. 1982. Isoelectric focusing in immobilized pH gradients: Principle, methodology and some applications. J. Biochem. Biophys. Methods 6:317-339.
3. Bloemberg, G. V., Kamst, E., Harteveld, M., van der Drift, K. M., Haverkamp, J., Thomas-Oates, J. E., Lugtenberg, B. J., and Spaink, H. P. 1995. A central domain of Rhizobium NodE protein mediates host specificity by determining the hydrophobicity of fatty acyl moieties of nodulation factors. Mol. Microbiol. 16:1123-1136.
4. Broome-Smith, J. K., Gnaneshan, S., Hunt, L. A., and Mehraein-Ghomi, F. 1994. Cleavable signal peptides are rarely found in bacterial cytoplasmic membrane proteins. Mol. Membr. Biol. 11:3-8.
5. Caetano-Anolles, G., Crist-Estes, D. K., and Bauer, W. D. 1988. Chemotaxis of Rhizobium meliloti to the plant flavone luteolin requires functional nodulation genes. J. Bacteriol. 170:3164-3169.
6. Celis, J. E., Rasmussen, H. H., Olsen, E., and Madsen, P. 1994. The human keratinocyte two dimensional protein database: Towards an integrated approach to the study of cell proliferation, differentiation and skin disease. Electrophoresis 15:1349-1458.
7. Colonna-Romano, S., Arnold, W., Schluter, A., Boistard, P., Puhler, A., and Priefer, U. B. 1990. An FNR-life protein encoded in Rhizobium leguminosarum biovar viciae shows structural and functional homology to Rhizobium meliloti FixK. Mol. Gen. Genet. 223:138-147.
8. Cordwell, S. J., Wilkins, M. R., Cerpa-Poljak, A., and Gooley, A. A. 1995. Cross-species identification of proteins separated by two-dimensional gel electrophoresis using matrix-assisted laser desorption ionisation/time-of-flight mass spectrometry and amino acid composition. Electrophoresis 16:438-443.
9. Dazzo, F. B. 1982. Leguminous root nodules. Pages 431-446 in: Experimental Microbiol Ecology. R. G. Burns and J. L. Slater, eds. Blackwell Scientific, Oxford, UK.
10. Djordjevic, M. A., Redmond, J. W., Batley, M., and Rolfe, B. G. 1987. Clovers secrete specific phenolic compounds which either stimulate or repress nod gene expression in Rhizobium trifolii. EMBO J. 6: 1173-1179.
11. Djordjevic, M. A., and Weinman, J. J. 1991. Factors determining host recognition in the clover-Rhizobium symbiosis. Aust. J. Plant Physiol. 18:543-557.
12. Dusha, I., Schroder, J., Putnoky, P., Banfalvi, Z., and Kondorosi, A. 1986. A cell-free system from Rhizobium meliloti to study the specific expression of nodulation genes. Eur. J. Biochem. 160:69-75.
13. Fischer, H. M. 1994. Genetic regulation of nitrogen fixation in rhizobia. Microbiol. Rev. 58:352-386.
14. Galat, A., Bouet, F., and Riviere, S. 1995. Amino acid compositions of proteins and their identities. Electrophoresis 16:1095-1103.
15. Gaworzewska, E. T., and Carlilie, M. J. 1982. Positive chemotaxis of Rhizobium leguminosarum and other bacteria towards root exudates from legumes and other plants. J. Gen. Microbiol. 128:789-798.
16. Görg, A., Boguth, G., Obermaier, C., and Posch, A. 1995. Two-dimensional polyacrylamide gel electrophoresis with immobilized pH gradients in the first dimension (IPG-Dalt): The state of the art and the controversy of vertical versus horizontal systems. Electrophoresis 16: 1079-1086.
17. Görg, A., Postel, W., and Gunther, S. 1988. The current state of two-dimensional electrophoresis with immobilized pH gradients. Electrophoresis 9:531-546.
18. Graumann, P., Schroder, K., Schmid, R., and Marahiel, M. A. 1996. Cold shock stress-induced proteins in Bacillus subtilis. J. Bacteriol. 178:4611-4619.
19. Gray, J. X., and Rolfe, B. G. 1990. Exopolysaccharide production in Rhizobium and its role in invasion. Mol. Microbiol. 4:1425-1431.
20. Huang, M. L., Cangelosi, G. A., Halperin, W., and Nestor, E. W. 1990. A chromosomal Agrobacterium tumefaciens gene required for effective plant signal transduction. J. Bacteriol. 172:1814-1822.
21. Humphery-Smith, I., Guyonnet, F., and Chastel, C. 1994. Polypeptide cartography of Spiroplasma taiwanese. Electrophoresis 15:1212-1217.
22. Innes, R. W., Kuempel, P. L., Plazinski, J., Canter-Cremers, H., Rolfe, B. G., and Djordjevic, M. A. 1985. Plant factors induce expression of nodulation and host-range genes in Rhizobium trifolii. Mol. Gen. Genet. 201:426-432.
23. Jungblut, P., Otto, A., Zeindl-Eberhart, E., Plessner, K. P., and Knecht, M. 1994. Protein composition of the human heart: The construction of a myocardial two-dimensional electrophoresis database. Electrophoresis 15:685-707.
24. Jungblut, P., Thiede, B., Zimmy-Arndt, U., Muller, E. C., and Scheler, C. 1996. Resolution power of two-dimensional electrophoresis and identification of proteins from gels. Electrophoresis 17:839-847.
25. Jungblut, P., and Wittmann-Liebold, B. 1995. Protein analysis on a genomic scale. J. Biotechnol. 41:111-120.
26. Kamo, M., Kawakami, T., Miyatake, N., and Tsugita, A. 1995. Separation and characterization of Arabidopsis thaliana proteins by two-dimensional gel electrophoresis. Electrophoresis 16:423-430.
27. Knecht, M., Regitz-Zagrosek, V., Pleissner, K. P., Emig, S., and Jungblut, P. 1994. Dilated cardiomyopathy: Computer assisted analysis of endomyocardial biopsy protein patterns by two-dimensional gel electrophoresis. Eur. J. Clin. Chem. Clin. Biochem. 32:615-624.
28. Lewis-Henderson, W. R., and Djordjevic, M. A. 1991. A cultivar-specific interaction between Rhizobium leguminosarum bv. trifolii and subterranean clover is controlled by nodM, other bacterial cultivar specificity genes, and a single recessive host gene. J. Bacteriol. 173: 2791-2799.
29. Matsudaira, P. 1987. Sequence from picomole quantities of proteins electroblotted onto PVDF membranes. J. Biol. Chem. 262:10035-10038.
30. McIver, J., Djordjevic, M. A., Weinman, J. J., Bender, G. L., and Rolfe, B. G. 1989. Extension of host range of Rhizobium leguminosarum bv. trifolii caused by point mutations in nodD that result in alterations in regulatory function and recognition of inducer molecules. Mol. Plant-Microbe Interact. 2:97-106.
31. McKay, I. A., and Djordjevic, M. A. 1993. Production and excretion of Nod metabolites by Rhizobium leguminosarum bv. trifolii are disrupted by the same environmental factors that reduce nodulation in the field. Appl. Environ. Microbiol. 59:3385-3392.
32. Pasquali, C., Frutiger, S., Wilkins, M. R., Hughes, G. J., Appel, R. D., and Bairoch, A. 1996. Two-dimensional gel electrophoresis of Escherichia coli homogenates: The Escherichia coli SWISS-2DPAGE database. Electrophoresis 17:547-555.
33. Peters, N. K., Frost, J. W., and Long, S. R. 1986. A plant flavone, luteolin, induces expression of Rhizobium meliloti nodulation genes. Science 233:977-980.
34. Philip-Hollingsworth, S., Orgambide, G. G., Bradford, J. J., Smith, D. K., Hollingsworth, R. I., and Dazzo, F. B. 1995. Mutation or increased copy number of nodE has no effect on the spectrum of chitolipooligosaccharide Nod factors made by Rhizobium leguminosarum bv. trifolii. J. Biol. Chem. 270:20968-20977.
35. Rabilloud, T. 1992. A comparison between low background silver diammine and silver nitrate protein stains. Electrophoresis 13:429-439.
36. Redmond, J. W., Batley, M., Djordjevic, M. A., Innes, R. W., Kuempel, P. L., and Rolfe, B. G. 1986. Flavones induce expression of nodulation genes in Rhizobium. Nature 323:632-635.
37. Rivilla, R., Sutton, J. M., and Downie, J. A. 1995. Rhizobium leguminosarum NodT is related to a family of outer-membrane transport proteins that includes TolC, PrtF, CyaE and AprF. Gene 161:27-31.
38. Schlaman, H. R. M., Spaink, H. P., Okker, R. J. H., and Lugtenberg, B. J. J. 1989. Subcellular localization of the nodD gene product in Rhizobium leguminosarum. J. Bacteriol. 171:4686-4693.
39. Schmidt, J., John, M., Wieneke, U., Krüssmann, H.-D., and Schell, J. 1986. Expression of the nodulation gene nodA in Rhizobium meliloti and localization of the gene product in the cytosol. Proc. Natl. Acad. Sci. USA 83:9581-9585.
40. Schmidt, J., Wingender, R., John, M., Wieneke, U., and Schell, J. 1988. Rhizobium meliloti nodA and nodB genes are involved in generating compounds that stimulate mitosis of plant cells. Proc. Natl. Acad. Sci. USA 85:8578-8582.
41. Schofield, P. R., and Watson, J. M. 1986. DNA sequence of Rhizobium trifolii nodulation genes reveals a reiterated and potentially regulatory sequence preceding nodABC and nodFE. Nucleic Acids Res. 14: 2891-2903.
42. Sobral, B. W., Honeycutt, R. J., Atherly, A. G., and McClelland, M. 1991. Electrophoretic separation of the three Rhizobium meliloti replicons. J. Bacteriol. 173:5173-5180.
43. Spaink, H. P., Weinman, J. J., Djordjevic, M. A., Wijffelman, C. A., Okker, R. J., and Lugtenberg, B. J. 1989. Genetic analysis and cellular localization of the Rhizobium host specificity-determining NodE protein. EMBO J. 8:2811-2818.
44. Spaink, H. P., Wijfjes, A. H. M., and Lugtenberg, B. J. J. 1995. Rhizobium NodI and NodJ proteins play a role in the efficiency of secretion of lipochitin oligosaccharides. J. Bacteriol. 177:6276-6281.
45. van Bogelen, R., Olsen, E., Wanner, B., and Neidhardt, F. 1996. Global analysis of proteins synthesized during phosphorus restriction in Escherichia coli. J. Bacteriol. 178:4344-4366.
46. van Rhijn, P., and Vanderleyden, J. 1995. The Rhizobium-plant symbiosis. Microbiol. Rev. 59:124-142.
47. Vasquez, M., Santana, O., and Quinto, C. 1993. The Nodi and NodJ proteins from Rhizobium and Bradyrhizobium strains are similar to capsular polysaccharide secretion proteins from Gram-negative bacteria. Mol. Microbiol. 8:369-377.
48. Wasinger, V. C., Cordwell, S. J., Cerpa-Poljak, A., Yan, J. X., Gooley, A. A., Wilkins, M. R., Duncan, M. W., Harris, R., Williams, K. L., and Humphery-Smith, I. 1995. Progress with gene-product mapping of the Mollicutes: Mycoplasma genitalium. Electrophoresis 16:1090-1094.
49. Wheeler, C. H., Berry, S. L., Wilkins, M. R., Corbett, J. M., Ou, K., Gooley, A. A., Humphery-Smith, I., Williams, K. L., and Dunn, M. J. 1996. Characterisation of proteins from two-dimensional electrophoresis gels by matrix-assisted laser desorption mass spectrometry and amino acid compositional analysis. Electrophoresis 17:580-587.
50. Wilkins, M. R., Pasquali, C., Appel, R. D., Ou, K., and Golaz, O. 1996a. From proteins to proteomes: Large scale protein identification by two-dimensional electrophoresis and amino acid analysis. Bio/Technology 14:61-65.
51. Wilkins, M. R., Sanchez, J. C., Williams, K. L., and Hochstrasser, D. F. 1996b. Current challenges and future applications for protein maps and post-translational vector maps in proteome projects. Electrophoresis 17:830-838.
52. Yan, J., Wilkins, M. R., Ou, K., Gooley, A. A., Williams, K. L., Sanchez, J. C., and Golaz, O. 1996. Large-scale amino acid analysis for proteome studies. J. Chromatogr. 736:291-302.