Resolution power of two-dimensional electrophoresis and identification of proteins from gels

Electrophoresis

Volumn 17, Issue 5, 1996, Pages 839-847

  Jungblut, Peter ^a,b,c   Thiede, Bernd ^a   Zimny Arndt, Ursula ^b,c   Müller, Eva Christina ^a   Scheler, Christian ^b   Wittmann Liebold, Brigitte ^a,b   Otto, Albrecht ^a  

^a MAX DELBRÜCK CENTER FOR MOLECULAR MEDICINE   (Germany)

^b Wittmann Inst Technol Anal B   (Germany)

^c MAX PLANCK INSTITUTE FOR INFECTION BIOLOGY   (Germany)

Author keywords

Mass spectrometry; Protein sequencing; Sample preparation; Two dimensional polyacrylamide gel electrophoresis

Indexed keywords

ELECTROPHORESIS; PROTEINS;

IDENTIFICATION OF PROTEINS; POWER-OF-TWO; PROTEIN SEQUENCING; RESOLUTION POWER; SAMPLE PREPARATION; TWO DIMENSIONAL ELECTROPHORESIS; TWO-DIMENSIONAL POLYACRYLAMIDE GEL ELECTROPHORESIS;

MASS SPECTROMETRY;

CONFERENCE PAPER; HUMAN; NONHUMAN; PEPTIDE MAPPING; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN ANALYSIS; SEQUENCE ANALYSIS; TECHNIQUE;

EID: 0030070176     PISSN: 01730835     EISSN: None     Source Type: Journal    
DOI: 10.1002/elps.1150170505     Document Type: Conference Paper

References (76)

1. Klose, J., Kobalz, U., Electrophoresis 1995, 16, 1034-1059.
2. Jungblut, P., Otto, A., Zeindl-Eberhart, E., Pleißner, K.-R, Knecht, M., Regitz-Zagrosek, V., Fleck, E., Wittmann-Liebold, B., Electrophoresis 1994, 15, 685-707.
3. Blomberg, A., Blomberg, I., Norbeck, J., Fey, S. J., Larsen, P. M., Roepstorff, P., Degand, H., Boutry, M., Posch, A., Görg, A., Eleclrophoresis 1995, 16, 1935-1945.
4. Aebersold, R., Leavitt, J., Eleclrophoresis 1990, 11, 517-519.
5. Eckerskorn, C., Jungblut, P., Mewes, W., Klose, J., Lottspeich, F., Electrophoresis 1988, 9, 830-838.
6. Jungblut, P., Dzionara, M., Klose, J., Wittmann-Liebold, B., J. Prot. Chem. 1992, 11, 603-612.
7. Jungblut, P., Eckerskorn, C., Lottspeich, F., Klose, J., Electrophoresis 1990, 11, 581-588.
8. Thiede, B., Otto, A., Zimny-Arndt, U., Müller, E.-C., Jungblut, P., Electrophoresis 1996, 17, 588-599.
9. Kahn, P., Science 1995, 270, 369-370.
10. Celis, J. E., Rasmussen, H. H., Olsen, E., Madsen, P., Leffers, H., Honoré, B., Dejgaard, K., Gromov, P., Vorum, H., Vassilev, A., Baskin, Y., Liu, X., Celis, A., Basse, B., Lauridsen, J. B., Ratz, G. P., Andersen, A. H., Walbum, E., Kjaergaard, I., Andersen, I., Puype, M., Van Damme, J., Vandekerckhove, J., Electrophoresis 1994, 15, 1349-1458.
11. Kaltschmidt, E., Wittmann, H. G., Anal. Biochem. 1970, 36, 401-412.
12. Kamp, R. M., Bosserhoff, A., Wittmann-Liebold, B., J. Chromatogr. 1984, 317, 181-192.
13. Smithies, O., Poulik, M. D., Nature 1956, 177, 1033.
14. Raymond, S., Annals N.Y. Acad. Sci. 1964, 121, 350-365.
15. Stegemann, H., Francksen, H., Macko, V., Z. Naturforsch. 1973, 28c, 722-732.
16. Klose, J., Humangenetik 1975, 26, 211-234.
17. O'Farrell, P. H., J. Biol. Chem. 1975, 250, 4007-4021.
18. Scheele, G. A., J. Biol. Chem. 1975, 250, 5375-5385.
19. Geyl, D., Böck, A., Isono, K., Mol. Gen. Genet. 1981, 181, 309-312.
20. Hatekeyama, T., Kimura, M., Eur. J. Biochem. 1988, 172, 703-711.
21. Engemann, S., Noelle, R., Herfurth, E., Briesemeister, U., Grelle, G., Wittmann-Liebold, B., Eur. J. Biochem. 1995, 234, 24-31.
22. Anderson, N. L., Esquer-Blasco, R., Hofmann, J.-P., Meheus, L., Raymackers, J., Steiner, S., Witzmann, F., Anderson, N. G., Electrophoresis 1995, 16, 1977-1981.
23. Wirth, P. J., Luo, L. D., Fujimoto, Y., Bisgaard, H. C., Olson, A. D., Eleclrophoresis 1991, 12, 931-954.
24. Giometti, C. S., Taylor, J., Tollaksen, S. L., Electrophoresis 1992, 13, 970-991.
25. Hughes, G. J., Frutiger, S., Paquet, N., Pasquali, C., Sanchez, J.-C., Tissot, J.-D., Bairoch, A., Hochstrasser, D. F., Electrophoresis 1993, 14, 1216-1222.
26. Kovalyov, L. I., Shishkin, S. S., Etimochkin, A. S., Kovalyova, M. A., Ershova, E. S., Egorov, T. A., Musalyamov, A. K., Electrophoresis 1995, 16, 1160-1169.
27. Sutton, C. W., Pemberton, K. S., Cotrell, J. S., Corbett, J. M., Wheeler, C. H., Dunn, M. J., Pappin, D. J., Electrophoresis 1995, 16, 308-316.
28. Jungblut, P., Prehm, J., Klose, J., J. Biol. Chem. Hoppe-Seyler 1987, 367, 439.
29. Otto, A., Benndorf, R., Wittmann-Liebold, B., Jungblut, P., J. Prot. Chem. 1994, 13, 478-480.
30. Jungblut, P., Klose, J., Biochem. Genet. 1985, 23, 227-245.
31. Jungblut, P., Zimny-Arndt, U., Klose, J., Electrophoresis 1989, 10, 464-472.
32. Klose, J., Feller, M., Electrophoresis 1981, 2, 12-24.
33. Jungblut, P., Klose, J., Biochem. Genet. 1986, 24, 925-939.
34. Jungblut, P., Klose, J., J. Chromatogr. 1989, 482, 125-132.
35. Jungblut, P., Baumeister, H., Klose, J., Electrophoresis 1993, 14, 638-644.
36. Towbin, H., Staehelin, T, Gordon, J., Proc. Natl. Acad. Sci. USA 1979, 76, 4350-4354.
37. Aebersold, R. H., Teplow, D. B., Hood, L. E., Kent, S. B. H., J. Biol. Chem. 1986, 261, 4229-4238.
38. Vandekerckhove, J., Bauw, G., Puype, M., Van Damme, J., Van Montagu, M., Eur. J. Biochem. 1985, 152, 9-19.
39. Matsudaira, P., J. Biol. Chem. 1987, 262, 10035-10038.
40. Eckerskorn, C., Mewes, W., Goretzki, H., Lottspeich, F., Eur. J. Biochem. 1988, 176, 509-519.
41. Eckerskorn, C., Strupat, K., Karas, M., Hillenkamp, F., Lottspeich, F., Electrophoresis 1992, 13, 664-665.
42. Strupat, K., Karas, M., Hillenkamp, F., Eckerskorn, C., Lottspeich, F., Anal. Chem. 1994, 66, 464-470.
43. Hirano, H., Komatsu, S., Kajiwara, H., Takagi, Y., Tsunasawa, S., Electrophoresis 1993, 14, 839-846.
44. Rasmussen, H. H., Van Damme, J., Puype, M., Cesser, B., Celis, J. E., Vandekerckhove, J., Electrophoresis 1991, 12, 873-882.
45. Zeindl-Eberhaart, E., Jungblut, P., Otto, A., Rabes, H. M., J. Biol. Chem. 1994, 269, 14589-14594.
46. Henzel, W. J., Billed, T. M., Stults, J. T., Wong, S. C., Grimley, C., Watanabe, C., Proc. Natl. Acad. Sci. USA 1993, 90, 5011-5015.
47. Pappin, D. J. C., Hojrup, P., Bleasby, A. J., Curr. Biol. 1993, 3, 327-332.
48. Mann, M., Hojrup, P., Roepstorff, P., Biol. Mass Spectrom. 1993, 22, 338-345.
49. James, P., Quadroni, M., Carafoli, E., Gonnet, G., Biochem. Biophys. Res. Commun. 1993, 195, 58-64.
50. Eckerskorn, C., Lottspeich, F., Chromatographia 1989, 28, 92-94.
51. Otto, A. in: Kamp, R. M., Wittmann-Liebold, B. (Eds.) Advanced Methods on Protein Structure Analysis, Springer Verlag, Berlin, in press.
52. Nokihara, K., Kuriki, T., Morita, N., J. Chromatogr. A 1994, 676, 233-238.
53. Edman, P., Begg, G., Eur. J. Biochem. 1967, 1, 80-91.
54. Hillenkamp, F., Karas, M., Beavis, R. C., Chait, B. T., Anal. Chem. 1991, 63, 1193A-1203A.
55. Fenn, J. B., Mann, M., Meng, C. K., Wong, S. F., Whitehouse, C. M., Science, 1989, 246, 64-71.
56. Wilm, M., Shevchenko, A., Houthaeve, T., Breit, S., Schweigerer, L., Fotsis, T., Mann, M., Nature 1996, 379, 466-469.
57. Chait, B. T., Wang, R., Beavis, R. C., Kent, S. B. H., Science 1993, 262, 89-92.
58. Bartley-Jones, M., Jeffery, W. A., Hansen, H. F., Pappin, D. J. C., Rapid Commun. Mass. Spectrom 1994, 8, 737-742.
59. Thiede, B., Wittmann-Liebold, B., Bienert, M., Krause, E., FEBS Lett. 1995, 357, 65-69.
60. Woods, H. A., Huang, A. Y. C., Cotter, R. J., Pasternack, G. R., Pardoll, D. M., Jaffee, E. M., Anal. Biochem. 1995, 226, 15-25.
61. Patterson, D. H., Tarr, G. E., Regnier, F. E., Martin, S. A., Anal. Chem. 1995, 67, 3971-3978.
62. Spengler, B., Kirsch, D., Kaufmann, R., Jaeger, E., Rapid Commun. Mass Spectrom. 1992, 6, 105-108.
63. Biemann, K., Scoble, H. A., Science 1987, 237, 992-998.
64. Hunt, D. F., Yates, J. R., Shabanowitz, J., Winston, S., Hauer, C. R., Proc. Natl. Acad. Sci. USA 1986, 83, 6233-6237.
65. Inglis, A. S., Anal. Biochem. 1991, 195, 183-196.
66. Bailey, J. M., Tu, O., Issai, G., Ha, A., Shively, J. E., Anal. Biochem. 1995, 224, 588-596.
67. Boyd, V. L., Bozzini, M., Zon, G, Noble, R. L., Mattaliano, R. J., Anal. Biochem. 1992, 206, 344-352.
68. Patterson, S. D., Aebersold, R., Electrophoresis 1995, 16, 1791-1814.
69. Brown, R. S., Lennon, J. J., Anal. Chem. 1995, 67, 1998-2003.
70. Mann, M., Wilm, M., Anal. Chem. 1994, 66, 4390-4399.
71. Knapp, D. R., Methods Enzymol. 1990, 193, 314-329.
72. Spengler, B., Lützenkirchen, F., Kaufmann, R., Org. Mass. Spectrom. 1993, 28, 1482-1490.
73. Bradley, C. V., Williams, D. H., Biochem. Biophys. Res. Commun. 1982, 104, 1223-1230.
74. Hayashi, R., Bai, Y., Hata, T., J. Biochem. 1975, 77, 69-79.
75. Wittmann-Liebold, B., Köpke, B., Arndt, A. K. E., Krömer, W., Hatakeyama, T., Wittmann, H. G. in: Hill, W. E., Dahlberg, A., Garrett, R., Moore, P. B., Schlessinger, D., Warner, J. R. (Eds.), The Ribosome, Structure, Function and Evolution. American Society for Microbiology, Washington DC 1990, pp. 598-616.
76. Roepstorff, P., Fohlmann, J., Biomed. Mass Spectrom. 1984, 11, 601.