메뉴 건너뛰기




Volumn 71, Issue 1, 1997, Pages 495-500

Magnesium-induced conformational change of packaging RNA for procapsid recognition and binding during phage φ29 DNA encapsidation

Author keywords

[No Author keywords available]

Indexed keywords

4' AMINOMETHYL 4,5',8 TRIMETHYLPSORALEN; DNA; EDETIC ACID; MAGNESIUM; PROTEIN; PSORALEN; RIBONUCLEASE; RNA;

EID: 0031060313     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.71.1.495-500.1997     Document Type: Article
Times cited : (50)

References (35)
  • 1
    • 0025614359 scopus 로고
    • Phylogenetic analysis and secondary structure of the Bacillus subtilis bacteriophage RNA required for DNA packaging
    • Bailey, S., J. Wichitwechkarn, D. Johnson, B. Reilly, D. Anderson, and J. W. Bodley. 1990. Phylogenetic analysis and secondary structure of the Bacillus subtilis bacteriophage RNA required for DNA packaging. J. Biol. Chem. 265:22365-22370.
    • (1990) J. Biol. Chem. , vol.265 , pp. 22365-22370
    • Bailey, S.1    Wichitwechkarn, J.2    Johnson, D.3    Reilly, B.4    Anderson, D.5    Bodley, J.W.6
  • 2
    • 0021783271 scopus 로고
    • The DNA translocation vertex of dsDNA bacteriophages
    • Bazinet, C., and J. King. 1985. The DNA translocation vertex of dsDNA bacteriophages. Annu. Rev. Microbiol. 39:309-129.
    • (1985) Annu. Rev. Microbiol. , vol.39 , pp. 309-1129
    • Bazinet, C.1    King, J.2
  • 3
    • 0019810050 scopus 로고
    • In vitro assembly of the Bacillus subtilis bacteriophage φ29
    • Bjornsti, M. A., B. E. Reilly, and D. L. Anderson. 1981. In vitro assembly of the Bacillus subtilis bacteriophage φ29. Proc. Natl. Acad. Sci. USA 78:5861-5865.
    • (1981) Proc. Natl. Acad. Sci. USA , vol.78 , pp. 5861-5865
    • Bjornsti, M.A.1    Reilly, B.E.2    Anderson, D.L.3
  • 4
    • 0021891866 scopus 로고
    • Psoralens as photoactive probes of nucleic acid structure and function: Organic chemistry, photochemistry, and biochemistry
    • Cimino, G. D., H. B. Gamper, S. T. Isaacs, and J. E. Hearst. 1985. Psoralens as photoactive probes of nucleic acid structure and function: organic chemistry, photochemistry, and biochemistry. Annu. Rev. Biochem. 54:1151-1193.
    • (1985) Annu. Rev. Biochem. , vol.54 , pp. 1151-1193
    • Cimino, G.D.1    Gamper, H.B.2    Isaacs, S.T.3    Hearst, J.E.4
  • 5
    • 0023651217 scopus 로고
    • Characterization of the small RNA of the bacteriophage φ29 DNA packaging machine
    • Guo, P., S. Bailey, J. W. Bodley, and D. Anderson. 1987. Characterization of the small RNA of the bacteriophage φ29 DNA packaging machine. Nucleic Acids Res. 15:7081-7090.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 7081-7090
    • Guo, P.1    Bailey, S.2    Bodley, J.W.3    Anderson, D.4
  • 6
    • 0023225629 scopus 로고
    • A small viral RNA is required for in vitro packaging of bacteriophage φ29 DNA
    • Guo, P., S. Erickson, and D. Anderson. 1987. A small viral RNA is required for in vitro packaging of bacteriophage φ29 DNA. Science 236:690-694.
    • (1987) Science , vol.236 , pp. 690-694
    • Guo, P.1    Erickson, S.2    Anderson, D.3
  • 7
    • 0025923286 scopus 로고
    • Regulation of the phage φ29 prohead shape and size by the portal vertex
    • Guo, P., S. Erickson, W. Xu, N. Olson, T. S. Baker, and D. Anderson. 1991. Regulation of the phage φ29 prohead shape and size by the portal vertex. Virology 183:366-373.
    • (1991) Virology , vol.183 , pp. 366-373
    • Guo, P.1    Erickson, S.2    Xu, W.3    Olson, N.4    Baker, T.S.5    Anderson, D.6
  • 8
    • 0022444512 scopus 로고
    • A defined system for in vitro packaging of DNA-gp3 of the Bacillus subtilis bacteriophage φ29
    • Guo, P., S. Grimes, and D. Anderson. 1986. A defined system for in vitro packaging of DNA-gp3 of the Bacillus subtilis bacteriophage φ29. Proc. Natl. Acad. Sci. USA 83:3505-3509.
    • (1986) Proc. Natl. Acad. Sci. USA , vol.83 , pp. 3505-3509
    • Guo, P.1    Grimes, S.2    Anderson, D.3
  • 9
    • 0023660940 scopus 로고
    • Prohead and DNA-gp3-dependent ATPase activity of the DNA packaging protein gp16 of bacteriophage φ29
    • Guo, P., C. Peterson, and D. Anderson. 1987. Prohead and DNA-gp3-dependent ATPase activity of the DNA packaging protein gp16 of bacteriophage φ29. J. Mol. Biol. 197:229-236.
    • (1987) J. Mol. Biol. , vol.197 , pp. 229-236
    • Guo, P.1    Peterson, C.2    Anderson, D.3
  • 10
    • 0023660929 scopus 로고
    • Initiation events in in vitro packaging of bacteriophage φ29 DNA-gp3
    • Guo, P., C. Peterson, and D. Anderson. 1987. Initiation events in in vitro packaging of bacteriophage φ29 DNA-gp3. J. Mol. Biol. 197:219-228.
    • (1987) J. Mol. Biol. , vol.197 , pp. 219-228
    • Guo, P.1    Peterson, C.2    Anderson, D.3
  • 11
    • 0025925179 scopus 로고
    • sRNA of bacteriophage φ29 of B. subtilis mediates DNA packaging of φ29 proheads assembled in E. coli
    • Guo, P., B. Rajogopal, D. Anderson, S. Erickson, and C.-S. Lee. 1991. sRNA of bacteriophage φ29 of B. subtilis mediates DNA packaging of φ29 proheads assembled in E. coli. Virology 185:395-400.
    • (1991) Virology , vol.185 , pp. 395-400
    • Guo, P.1    Rajogopal, B.2    Anderson, D.3    Erickson, S.4    Lee, C.-S.5
  • 13
    • 0027990605 scopus 로고
    • Use of photoaffinity crosslinking and molecular modeling to analyze the global architecture of ribonuclease P RNA
    • Harris, M., J. Nolan, A. Malhotra, J. Brown, S. Harvey, and N. Pace. 1994. Use of photoaffinity crosslinking and molecular modeling to analyze the global architecture of ribonuclease P RNA. EMBO J. 13:3953-3963.
    • (1994) EMBO J. , vol.13 , pp. 3953-3963
    • Harris, M.1    Nolan, J.2    Malhotra, A.3    Brown, J.4    Harvey, S.5    Pace, N.6
  • 14
    • 0027231877 scopus 로고
    • The NFIII/OCT-1 binding site stimulates adenovirus DNA replication in vivo and is functionally redundant with adjacent sequences
    • Hatfield, L., and P. Hearing. 1993. The NFIII/OCT-1 binding site stimulates adenovirus DNA replication in vivo and is functionally redundant with adjacent sequences. J. Virol. 67:3931-3939.
    • (1993) J. Virol. , vol.67 , pp. 3931-3939
    • Hatfield, L.1    Hearing, P.2
  • 15
    • 0022036079 scopus 로고
    • Mapping the location of psoralen crosslinks on RNA by mung bean nuclease sensitivity of RNA-DNA hybrids
    • Hui, C. F., and C. R. Cantor. 1985. Mapping the location of psoralen crosslinks on RNA by mung bean nuclease sensitivity of RNA-DNA hybrids. Proc. Natl. Acad. Sci. USA 82:1381-1385.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 1381-1385
    • Hui, C.F.1    Cantor, C.R.2
  • 16
    • 0028237035 scopus 로고
    • Stabilization of RNA structure by Mg ions: Specific and non-specific effects
    • Laing, L. G., T. C. Gluick, and D. E. Draper. 1994. Stabilization of RNA structure by Mg ions: specific and non-specific effects. J. Mol. Biol. 237:577-587.
    • (1994) J. Mol. Biol. , vol.237 , pp. 577-587
    • Laing, L.G.1    Gluick, T.C.2    Draper, D.E.3
  • 17
    • 0027965277 scopus 로고
    • A highly sensitive system for the assay of in vitro viral assembly of bacteriophage φ29 of Bacillus subtilis
    • Lee, C. S., and P. Guo. 1994. A highly sensitive system for the assay of in vitro viral assembly of bacteriophage φ29 of Bacillus subtilis. Virology 202:1039-1042.
    • (1994) Virology , vol.202 , pp. 1039-1042
    • Lee, C.S.1    Guo, P.2
  • 18
    • 0029078936 scopus 로고
    • In vitro assembly of infectious virions of double-stranded DNA phage φ29 from cloned gene products and synthetic nucleic acids
    • Lee, C. S., and P. Guo. 1995. In vitro assembly of infectious virions of double-stranded DNA phage φ29 from cloned gene products and synthetic nucleic acids. J. Virol. 69:5018-5023.
    • (1995) J. Virol. , vol.69 , pp. 5018-5023
    • Lee, C.S.1    Guo, P.2
  • 19
    • 0029039737 scopus 로고
    • Sequential interactions of structural proteins in phage φ29 procapsid assembly
    • Lee, C. S., and P. Guo. 1995. Sequential interactions of structural proteins in phage φ29 procapsid assembly. J. Virol. 69:5024-5032.
    • (1995) J. Virol. , vol.69 , pp. 5024-5032
    • Lee, C.S.1    Guo, P.2
  • 20
    • 0029940995 scopus 로고    scopus 로고
    • Analysis of the complete nucleotide sequence and functional organization of the genome of Streptococcus pneumoniae bacteriophage Cp-1
    • Martin, A. C., R. Lopez, and P. Garcia. 1996. Analysis of the complete nucleotide sequence and functional organization of the genome of Streptococcus pneumoniae bacteriophage Cp-1. J. Virol. 70:3678-3687.
    • (1996) J. Virol. , vol.70 , pp. 3678-3687
    • Martin, A.C.1    Lopez, R.2    Garcia, P.3
  • 21
    • 0025278763 scopus 로고
    • Transcription of orthopoxvirus telomeres at late times during infection
    • Parsons, B. L., and D. J. Pickup. 1990. Transcription of orthopoxvirus telomeres at late times during infection. Virology 175:69-80.
    • (1990) Virology , vol.175 , pp. 69-80
    • Parsons, B.L.1    Pickup, D.J.2
  • 22
    • 0027992332 scopus 로고
    • Characterization of the prohead-pRNA interaction of bacteriophage φ29
    • Reid, R. J. D., J. W. Bodley, and D. Anderson. 1994. Characterization of the prohead-pRNA interaction of bacteriophage φ29. J. Biol. Chem. 269:5157-5162.
    • (1994) J. Biol. Chem. , vol.269 , pp. 5157-5162
    • Reid, R.J.D.1    Bodley, J.W.2    Anderson, D.3
  • 23
    • 0028358819 scopus 로고
    • Probing the structure of bacteriophage φ29 prohead RNA with specific mutations
    • Reid, R. J. D., F. Zhang, S. Benson, and D. Anderson. 1994. Probing the structure of bacteriophage φ29 prohead RNA with specific mutations. J. Biol. Chem. 269:18656-18661.
    • (1994) J. Biol. Chem. , vol.269 , pp. 18656-18661
    • Reid, R.J.D.1    Zhang, F.2    Benson, S.3    Anderson, D.4
  • 24
    • 0031060162 scopus 로고    scopus 로고
    • Approaches to determine stoichiometry of viral assembly components
    • Trottier, M., and P. Guo. 1997. Approaches to determine stoichiometry of viral assembly components. J. Virol. 71:487-494.
    • (1997) J. Virol. , vol.71 , pp. 487-494
    • Trottier, M.1    Guo, P.2
  • 25
    • 0029655643 scopus 로고    scopus 로고
    • Complete inhibition of virion assembly in vivo with mutant pRNA essential for phage φ29 DNA packaging
    • Trottier, M., C. L. Zhang, and P. Guo. 1996. Complete inhibition of virion assembly in vivo with mutant pRNA essential for phage φ29 DNA packaging. J. Virol. 70:55-61.
    • (1996) J. Virol. , vol.70 , pp. 55-61
    • Trottier, M.1    Zhang, C.L.2    Guo, P.3
  • 26
    • 0026442391 scopus 로고
    • Supercoiled DNA wraps around the bacteriophage φ29 head-tail connector
    • Turnquist, S., M. Simon, E. Egelman, and D. Anderson. 1992. Supercoiled DNA wraps around the bacteriophage φ29 head-tail connector. Proc. Natl. Acad. Sci. USA 89:10479-10483.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 10479-10483
    • Turnquist, S.1    Simon, M.2    Egelman, E.3    Anderson, D.4
  • 27
    • 0027546296 scopus 로고
    • Psoralen crosslinking of small RNAs in vitro
    • Wassarman, D. A. 1993. Psoralen crosslinking of small RNAs in vitro. Mol. Biol. Rep. 17:143-151.
    • (1993) Mol. Biol. Rep. , vol.17 , pp. 143-151
    • Wassarman, D.A.1
  • 28
    • 0024967168 scopus 로고
    • Prohead RNA of bacteriophage φ29: Size, stoichiometry and biological activity
    • Wichitwechkarn, J., S. Bailey, J. W. Bodley, and D. Anderson. 1989. Prohead RNA of bacteriophage φ29: size, stoichiometry and biological activity. Nucleic Acids Res. 17:3459-3468.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 3459-3468
    • Wichitwechkarn, J.1    Bailey, S.2    Bodley, J.W.3    Anderson, D.4
  • 29
    • 0026587654 scopus 로고
    • Mutant prohead RNAs in the in vitro packaging of bacteriophage φ29 DNA-gp3
    • Wichitwechkarn, J., D. Johnson, and D. Anderson. 1992. Mutant prohead RNAs in the in vitro packaging of bacteriophage φ29 DNA-gp3. J. Mol. Biol. 223:991-998.
    • (1992) J. Mol. Biol. , vol.223 , pp. 991-998
    • Wichitwechkarn, J.1    Johnson, D.2    Anderson, D.3
  • 30
    • 0020073606 scopus 로고
    • Sequencing psoralen photochemically reactive sites in E. coli 16s ribosomal RNA
    • Youvan, D. C., and J. E. Hearst. 1982. Sequencing psoralen photochemically reactive sites in E. coli 16s ribosomal RNA. Anal. Biochem. 119:86-89.
    • (1982) Anal. Biochem. , vol.119 , pp. 86-89
    • Youvan, D.C.1    Hearst, J.E.2
  • 31
    • 0028969693 scopus 로고
    • Bulge-induced bends in RNA: Quantification by transient electric birefringence
    • Zacharias, M., and P. J. Hagerman. 1995. Bulge-induced bends in RNA: quantification by transient electric birefringence. J. Mol. Biol. 247:486-500.
    • (1995) J. Mol. Biol. , vol.247 , pp. 486-500
    • Zacharias, M.1    Hagerman, P.J.2
  • 32
    • 0028361637 scopus 로고
    • The proximate 5′ and 3′ ends of the 120-base viral RNA (pRNA) are crucial for the packaging of bacteriophage φ29 DNA
    • Zhang, C. L., C.-S. Lee, and P. Guo. 1994. The proximate 5′ and 3′ ends of the 120-base viral RNA (pRNA) are crucial for the packaging of bacteriophage φ29 DNA. Virology 201:77-85.
    • (1994) Virology , vol.201 , pp. 77-85
    • Zhang, C.L.1    Lee, C.-S.2    Guo, P.3
  • 33
    • 0028978266 scopus 로고
    • Inhibition of phage φ29 assembly by antisense oligonucleotides targeting viral pRNA essential for DNA packaging
    • Zhang, C. L., K. Garver, and P. Guo. 1995. Inhibition of phage φ29 assembly by antisense oligonucleotides targeting viral pRNA essential for DNA packaging. Virology 211:568-576.
    • (1995) Virology , vol.211 , pp. 568-576
    • Zhang, C.L.1    Garver, K.2    Guo, P.3
  • 34
    • 0029437961 scopus 로고
    • Confirmation of the helical structure of the 5′/3′ termini of the essential DNA packaging pRNA of phage φ29
    • Zhang, C. L., T. Tellinghuiesn, and P. Guo. 1995. Confirmation of the helical structure of the 5′/3′ termini of the essential DNA packaging pRNA of phage φ29. RNA 1:1041-1050.
    • (1995) RNA , vol.1 , pp. 1041-1050
    • Zhang, C.L.1    Tellinghuiesn, T.2    Guo, P.3
  • 35
    • 0028966682 scopus 로고
    • Circularly permuted viral pRNA active and specific in the packaging of bacteriophage φ29 DNA
    • Zhang, C. L., M. Trottier, and P. X. Guo. 1995. Circularly permuted viral pRNA active and specific in the packaging of bacteriophage φ29 DNA. Virology 207:442-451.
    • (1995) Virology , vol.207 , pp. 442-451
    • Zhang, C.L.1    Trottier, M.2    Guo, P.X.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.