메뉴 건너뛰기




Volumn 39, Issue 1, 1997, Pages 90-94

The complete sequences of the galago and rabbit β-globin locus control regions: Extended sequence and functional conservation outside the cores of DNase hypersensitive sites

Author keywords

[No Author keywords available]

Indexed keywords

BETA GLOBIN;

EID: 0031034307     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1996.4458     Document Type: Article
Times cited : (31)

References (29)
  • 1
    • 0028971217 scopus 로고
    • Participation of the human β-globin locus control region in initiation of DNA replication
    • 1. Aladjem, M. I., Groudine, M., Brody, L. L., Dieken, E. S., Fournier, R. E. K. Wahl, G. M., and Epner, E. M. (1995). Participation of the human β-globin locus control region in initiation of DNA replication. Science 270: 815-819.
    • (1995) Science , vol.270 , pp. 815-819
    • Aladjem, M.I.1    Groudine, M.2    Brody, L.L.3    Dieken, E.S.4    Fournier, R.E.K.5    Wahl, G.M.6    Epner, E.M.7
  • 2
    • 0029558513 scopus 로고
    • Synergistic regulation of human β-globin gene switching by locus control region elements HS3 and HS4
    • 2. Bungert, J., Dave, U., Lim, K.-C., Kieuw, K. H., Shavit, J. A., Liu, Q., and Engel, J. D. (1995). Synergistic regulation of human β-globin gene switching by locus control region elements HS3 and HS4. Genes Dev. 9: 3083-3096.
    • (1995) Genes Dev. , vol.9 , pp. 3083-3096
    • Bungert, J.1    Dave, U.2    Lim, K.-C.3    Kieuw, K.H.4    Shavit, J.A.5    Liu, Q.6    Engel, J.D.7
  • 3
    • 0030050402 scopus 로고    scopus 로고
    • A dominant chromatin opening activity in 5′ hypersensitive site 3 of the human β-globin locus control region
    • 3. Ellis, J., Tan-Un, K. C., Harper, A., Michalovich, D., Yannoutsos, N., Philipsen, S., and Grosveld, F. (1996). A dominant chromatin opening activity in 5′ hypersensitive site 3 of the human β-globin locus control region. EMBO J. 15: 562-568.
    • (1996) EMBO J. , vol.15 , pp. 562-568
    • Ellis, J.1    Tan-Un, K.C.2    Harper, A.3    Michalovich, D.4    Yannoutsos, N.5    Philipsen, S.6    Grosveld, F.7
  • 4
    • 0027202509 scopus 로고
    • Developmental regulation of human β-globin gene transcription: A switch of loyalties?
    • 4. Engel, J. D. (1993). Developmental regulation of human β-globin gene transcription: A switch of loyalties? Trends Genet. 9: 304-309.
    • (1993) Trends Genet. , vol.9 , pp. 304-309
    • Engel, J.D.1
  • 5
    • 0029091902 scopus 로고
    • Targeted deletion of 5′HS2 of the murine β-globin LCR reveals that it is not essential for proper regulation of the β-globin locus
    • 5. Fiering, S., Epner, E., Robinson, K., Zhuang, Y., Telling, A., Hu, M., Martin, D. I. K., Enver, T., Ley, T. J., and Groudine, M. (1995). Targeted deletion of 5′HS2 of the murine β-globin LCR reveals that it is not essential for proper regulation of the β-globin locus. Genes Dev. 9: 2203-2213.
    • (1995) Genes Dev. , vol.9 , pp. 2203-2213
    • Fiering, S.1    Epner, E.2    Robinson, K.3    Zhuang, Y.4    Telling, A.5    Hu, M.6    Martin, D.I.K.7    Enver, T.8    Ley, T.J.9    Groudine, M.10
  • 6
    • 0025107556 scopus 로고
    • A deletion of the human β-globin locus activation region causes a major alteration in chromatin structure and replication across the entire β-globin locus
    • 6. Forrester, W. C., Epner, E., Driscoll, M. C., Enver, T., Brice, M., Papayannopoulou, T., and Groudine, M. (1990). A deletion of the human β-globin locus activation region causes a major alteration in chromatin structure and replication across the entire β-globin locus. Genes Dev. 4: 1637-1649.
    • (1990) Genes Dev. , vol.4 , pp. 1637-1649
    • Forrester, W.C.1    Epner, E.2    Driscoll, M.C.3    Enver, T.4    Brice, M.5    Papayannopoulou, T.6    Groudine, M.7
  • 8
    • 0023663887 scopus 로고
    • Position-independent, high-level expression of the human β-globin gene in transgenic mice
    • 8. Grosveld, F., van Assendelft, G. B., Greaves, D., and Kollias, G. (1987). Position-independent, high-level expression of the human β-globin gene in transgenic mice. Cell 51: 975-985.
    • (1987) Cell , vol.51 , pp. 975-985
    • Grosveld, F.1    Van Assendelft, G.B.2    Greaves, D.3    Kollias, G.4
  • 10
    • 0028363569 scopus 로고
    • Differential phylogenetic footprinting as a means to identify base changes responsible for recruitment of the anthropoid γ gene to a fetal expression pattern
    • 10. Gumucio, D. L., Shelton, D. A., Blanchard-McQuate, K., Gray, T.A., Tarle, S. A., Heilstedt-Williamson, H., Slightom, J., Collins, F. S., and Goodman, M. (1994). Differential phylogenetic footprinting as a means to identify base changes responsible for recruitment of the anthropoid γ gene to a fetal expression pattern. J. Biol. Chem. 269: 15371-15380.
    • (1994) J. Biol. Chem. , vol.269 , pp. 15371-15380
    • Gumucio, D.L.1    Shelton, D.A.2    Blanchard-McQuate, K.3    Gray, T.A.4    Tarle, S.A.5    Heilstedt-Williamson, H.6    Slightom, J.7    Collins, F.S.8    Goodman, M.9
  • 11
    • 0027322429 scopus 로고
    • Comparative analysis of the locus control region of the rabbit β-like globin gene cluster: HS3 increases transient expression of an embryonic ∈-globin gene
    • 11. Hardison, R., Xu, J., Jackson, J., Mansberger, J., Selifonova, O., Grotch, B., Biesecker, J., Petrykowska, H., and Miller, W. (1993). Comparative analysis of the locus control region of the rabbit β-like globin gene cluster: HS3 increases transient expression of an embryonic ∈-globin gene. Nucleic Acids Res. 21: 1265-1272.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 1265-1272
    • Hardison, R.1    Xu, J.2    Jackson, J.3    Mansberger, J.4    Selifonova, O.5    Grotch, B.6    Biesecker, J.7    Petrykowska, H.8    Miller, W.9
  • 12
    • 0011378410 scopus 로고    scopus 로고
    • Locus control regions of globin gene domains and hemoglobin switching: Phylogenetic analysis and mechanism of action
    • (R. Kumar, Ed.), R. G. Landes, Georgetown, TX, in press
    • 12. Hardison, R. C. (1996). Locus control regions of globin gene domains and hemoglobin switching: Phylogenetic analysis and mechanism of action. In "Production of Human Hemoglobin in Transgenic Swine: The Hunt for the Red Blood Cell Substitute" (R. Kumar, Ed.), R. G. Landes, Georgetown, TX, in press.
    • (1996) Production of Human Hemoglobin in Transgenic Swine: The Hunt for the Red Blood Cell Substitute
    • Hardison, R.C.1
  • 13
    • 0026453360 scopus 로고
    • Structure and function of the murine β-globin locus control region 5′ HS-3
    • 13. Hug, B. A., Moon, A. M., and Ley, T. J. (1992). Structure and function of the murine β-globin locus control region 5′ HS-3. Nucleic Acids Res. 21: 5771-5778.
    • (1992) Nucleic Acids Res. , vol.21 , pp. 5771-5778
    • Hug, B.A.1    Moon, A.M.2    Ley, T.J.3
  • 14
    • 0029954767 scopus 로고    scopus 로고
    • Analysis of mice containing a targeted deletion of β-globin locus control region hypersensitive site 3
    • 14. Hug, B. A., Wesselschmidt, R. L., Fiering, S., Bender, M. A., Epner, E., Groudine, M., and Ley, T. J. (1996). Analysis of mice containing a targeted deletion of β-globin locus control region hypersensitive site 3. Mol. Cell. Biol. 16: 2906-2912.
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 2906-2912
    • Hug, B.A.1    Wesselschmidt, R.L.2    Fiering, S.3    Bender, M.A.4    Epner, E.5    Groudine, M.6    Ley, T.J.7
  • 15
    • 0029959548 scopus 로고    scopus 로고
    • Sequences within and flanking hypersensitive sites 3 and 2 of the β-globin locus control region required for synergistic versus additive interaction with the ∈-globin gene promoter
    • 15. Jackson, J. D., Miller, W., and Hardison, R. C. (1996). Sequences within and flanking hypersensitive sites 3 and 2 of the β-globin locus control region required for synergistic versus additive interaction with the ∈-globin gene promoter. Nucleic Acids Res. 24: 4327-4335.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 4327-4335
    • Jackson, J.D.1    Miller, W.2    Hardison, R.C.3
  • 16
    • 17544371344 scopus 로고    scopus 로고
    • Role of DNA sequences outside the cores of DNase hypersensitive sites (HSs) in functions of the β-globin locus control region: Domain opening and synergism between HS2 and HS3
    • 16. Jackson, J. D., Petrykowska, H., Philipsen, S., Miller, W., and Hardison, R. (1996). Role of DNA sequences outside the cores of DNase hypersensitive sites (HSs) in functions of the β-globin locus control region: Domain opening and synergism between HS2 and HS3. J. Biol. Chem. 271: 11871-11878.
    • (1996) J. Biol. Chem. , vol.271 , pp. 11871-11878
    • Jackson, J.D.1    Petrykowska, H.2    Philipsen, S.3    Miller, W.4    Hardison, R.5
  • 17
    • 0026441126 scopus 로고
    • The mouse β-globin locus control region: Hypersensitive sites 3 and 4
    • 17. Jimenez, G., Gale, K. B., and Enver, T. (1992). The mouse β-globin locus control region: Hypersensitive sites 3 and 4. Nucleic Acids Res. 20: 5797-5803.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 5797-5803
    • Jimenez, G.1    Gale, K.B.2    Enver, T.3
  • 18
    • 0022355905 scopus 로고
    • Nucleotide sequence of 16-kilobase pairs of DNA 5′ to the human ∈-globin gene
    • 18. Li, Q., Powers, P. A., and Smithies, O. (1985). Nucleotide sequence of 16-kilobase pairs of DNA 5′ to the human ∈-globin gene. J. Biol. Chem. 260: 14901-14910.
    • (1985) J. Biol. Chem. , vol.260 , pp. 14901-14910
    • Li, Q.1    Powers, P.A.2    Smithies, O.3
  • 19
    • 0026101602 scopus 로고
    • Primary structure of the goat β-globin locus control region
    • 19. Li, Q., Zhou, B., Powers, P., Enver, T., and Stamatoyannopoulos, G. (1991). Primary structure of the goat β-globin locus control region. Genomics 9: 488-499.
    • (1991) Genomics , vol.9 , pp. 488-499
    • Li, Q.1    Zhou, B.2    Powers, P.3    Enver, T.4    Stamatoyannopoulos, G.5
  • 20
    • 11944256454 scopus 로고
    • Conservation of the primary structure, organization, and function of the human and mouse β-globin locus-activating regions
    • 20. Moon, A. M., and Ley, T. J. (1990). Conservation of the primary structure, organization, and function of the human and mouse β-globin locus-activating regions. Proc. Natl. Acad. Sci. USA 87: 7693-7697.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 7693-7697
    • Moon, A.M.1    Ley, T.J.2
  • 21
    • 0029957832 scopus 로고    scopus 로고
    • Effect of deletion of 5′HS3 or 5′HS2 of the human β-globin LCR on the developmental regulation of globin gene expression in β-YAC transgenic mice
    • 21. Peterson, K., Clegg, C., Navas, P., Norton, E., Kimbrough, T., and Stamatoyannopoulos, G. (1996). Effect of deletion of 5′HS3 or 5′HS2 of the human β-globin LCR on the developmental regulation of globin gene expression in β-YAC transgenic mice. Proc. Natl. Acad. Sci. USA 93: 6605-6609.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 6605-6609
    • Peterson, K.1    Clegg, C.2    Navas, P.3    Norton, E.4    Kimbrough, T.5    Stamatoyannopoulos, G.6
  • 22
    • 0028853170 scopus 로고
    • NFE2 and GATA binding motifs are required for the formation of DNase I hypersensitive site 4 of the human β-globin locus control region
    • 22. Stamatoyannopoulos, J. A., Goodwin, A., Joyce, T., and Lowrey, C. H. (1995). NFE2 and GATA binding motifs are required for the formation of DNase I hypersensitive site 4 of the human β-globin locus control region. EMBO J. 14: 106-116.
    • (1995) EMBO J. , vol.14 , pp. 106-116
    • Stamatoyannopoulos, J.A.1    Goodwin, A.2    Joyce, T.3    Lowrey, C.H.4
  • 24
    • 0025342573 scopus 로고
    • Consensus patterns in DNA
    • 24. Stormo, G. (1990). Consensus patterns in DNA. Methods Enzymol. 183: 211-221.
    • (1990) Methods Enzymol. , vol.183 , pp. 211-221
    • Stormo, G.1
  • 25
    • 0026752871 scopus 로고
    • The β-globin gene cluster of the prosimian primate Galago crassicaudatus: Nucleotide sequence determination of the 41-kb cluster and comparative sequence analysis
    • 25. Tagle, D., Stanhope, M. J., Siemieniak, D. R., Benson, P., Goodman, M., and Slightom, J. L. (1992). The β-globin gene cluster of the prosimian primate Galago crassicaudatus: Nucleotide sequence determination of the 41-kb cluster and comparative sequence analysis. Genomics 13: 741-760.
    • (1992) Genomics , vol.13 , pp. 741-760
    • Tagle, D.1    Stanhope, M.J.2    Siemieniak, D.R.3    Benson, P.4    Goodman, M.5    Slightom, J.L.6
  • 26
    • 0023821768 scopus 로고
    • Embryonic ∈ and γ globin genes of a prosimian primate (Galago crassicaudatus): Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints
    • 26. Tagle, D. A., Koop, B. F., Goodman, M., Slightom, J., Hess, D. L., and Jones, R. T. (1988) Embryonic ∈ and γ globin genes of a prosimian primate (Galago crassicaudatus): Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints. J. Mol. Biol. 203: 7469-7480.
    • (1988) J. Mol. Biol. , vol.203 , pp. 7469-7480
    • Tagle, D.A.1    Koop, B.F.2    Goodman, M.3    Slightom, J.4    Hess, D.L.5    Jones, R.T.6
  • 27
    • 0344272073 scopus 로고
    • The β-like globin gene domain in human erythroid cells
    • 27. Tuan, D., Solomon, W., Li, Q., and London, I. M. (1985). The β-like globin gene domain in human erythroid cells. Proc. Natl. Acad. Sci. USA 82: 6384-6388.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 6384-6388
    • Tuan, D.1    Solomon, W.2    Li, Q.3    London, I.M.4
  • 28
    • 0029051646 scopus 로고
    • Transcription complex stablility and chromatin dynamics in vivo
    • 28. Wijgerde, M., Grosveld, F., and Fraser, P. (1995). Transcription complex stablility and chromatin dynamics in vivo. Nature 377: 209-213.
    • (1995) Nature , vol.377 , pp. 209-213
    • Wijgerde, M.1    Grosveld, F.2    Fraser, P.3
  • 29
    • 0028180340 scopus 로고
    • A 5′ β-globin matrix-attachment region and the polyoma enhancer together confer position-independent transcription
    • 29. Yu, Z., Bock, J., Slightom, J., and Villeponteau, B. (1994). A 5′ β-globin matrix-attachment region and the polyoma enhancer together confer position-independent transcription. Gene 139: 139-145.
    • (1994) Gene , vol.139 , pp. 139-145
    • Yu, Z.1    Bock, J.2    Slightom, J.3    Villeponteau, B.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.