Purification and substrate specificity of polydeoxyribonucleotide kinases isolated from calf thymus and rat liver

Journal of Cellular Biochemistry

Volumn 64, Issue 2, 1997, Pages 258-272

  Karimi Busheri, Feridoun ^b   Weinfeld, Michael ^a  

^a CROSS CANCER INSTITUTE   (Canada)

^b NONE

Author keywords

DNA phosphorylation; DNA repair; DNA strand break; DNA termini; phosphatase; polynucleotide kinase

Indexed keywords

PHOSPHOTRANSFERASE; POLYDEOXYRIBONUCLEOTIDE;

ANIMAL TISSUE; ARTICLE; DNA REPAIR; DNA STRAND BREAKAGE; ENZYME ISOLATION; ENZYME PURIFICATION; ENZYME SPECIFICITY; LIVER; NONHUMAN; PRIORITY JOURNAL; RAT; THYMUS;

ANIMALS; CATTLE; CELL EXTRACTS; DNA; ELECTROPHORESIS, POLYACRYLAMIDE GEL; HYDROGEN-ION CONCENTRATION; ISOELECTRIC POINT; LIVER; PHOSPHORYLATION; POLYNUCLEOTIDE 5'-HYDROXYL-KINASE; RATS; SUBSTRATE SPECIFICITY; THYMUS GLAND;

EID: 0031031032     PISSN: 07302312     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-4644(199702)64:2<258::AID-JCB9>3.0.CO;2-W     Document Type: Article

References (34)

1. Amitsur M, Levitz R, Kaufmann G (1987): Bacteriophage T4 anticodon nuclease, polynucleotide kinase and RNA ligase reprocess the host lysine tRNA. EMBO J 6:2499-2503.
2. Austin GE, Sirakoff D, Roop B, Moyer GH (1978): Purification and properties of polynucleotide kinase of calf thymus. Biochim Biophys Acta 522:412-422.
3. Barry MA, Eastman A (1993): Identification of deoxyribonuclease II as an endonuclease involved in apoptosis. Arch Biochem Biophys 300:440-450.
4. Bases R, Hamori I, Piazza L, Maio J, Mendez, F (1990): DNA base and strand damage in X-irradiated monkey CV-1 cells: Influence of pretreatment using small doses of radiation. Int J Radiat Biol 58:35-54.
5. Bloomfield VA, Crothers DM, Tinoco Jr I (1974): "Physical Chemistry of Nucleic Acids." New York: Harper and Row.
6. Bosdal T, Lillehaug JR (1985): Purification and kinetic properties of polynucleotide kinase from rat testes. Biochim Biophys Acta 840:280-286.
7. Buchko GW, Weinfeld M (1993): Influence of nitrogen, oxygen, and nitroimidazole radiosensitizers on DNA damage induced by ionizing radiation. Biochemistry 32:2186-2193.
8. Cameron V, Uhlenbeck OC (1977): 3′-Phosphatase activity in T4 polynucleotide kinase. Biochemistry 16:5120-5126.
9. Coquerelle T, Bopp A, Kessler B, Hagen U (1973): Strand breaks and 5′ end-groups in DNA of irradiated thymocytes. Int J Radiat Biol 24:397-404.
10. Cummings OW, King TC, Holden JA, Low RL (1987): Purification and characterization of the potent endonuclease in extracts of bovine heart mitochondria. J Biol Chem 262:2005-2015.
11. Demple B, Harrison L (1994): Repair of oxidative damage to DNA: Enzymology and biology. Annu Rev Biochem 63: 915-948.
12. Friedberg EC, Walker GC, Siede W (1995): "DNA Repair and Mutagenesis." Washington, DC: ASM Press.
13. Habraken Y, Verly WG (1983): The DNA 3′-phosphatase and 5′-hydroxyl kinase of rat liver chromatin. FEBS Lett 160:46-50.
14. Habraken Y, Verly WG (1986): Chromatin 3′-phosphatase/ 5′-OH kinase cannot transfer phosphate from 3′ to 5′ across a strand nick in DNA. Nucleic Acids Res 20:8103-8110.
15. Habraken Y, Verly WG (1988): Further purification and characterization of the DNA 3′-phosphatase from ratliver chromatin which is also a polynucleotide 5′-hydroxyl kinase. Eur J Biochem 171:59-66.
16. Henner WD, Rodriguez LO, Hecht SM, Haseltine WA (1983): Gamma-ray induced deoxyribonucleic acid strand breaks. 3′ Glycolate termini. J Biol Chem 258:711-713.
17. Kleppe K, Lillehaug JR (1979): Polynucleotide kinase. Adv Enzymol 48:245-275.
18. Laemmli UK (1970): Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
19. Lennartz M, Coquerelle T, Hagen, U (1975): Oxygen-effect on strand breaks and specific end-groups in DNA of irradiated thymocytes. Int J Radiat Biol 27:577-587.
20. Levin C, Zimmerman SB (1976): A deoxyribonucleic acid kinase from nuclei of rat liver. Purification and properties. J Biol Chem 251:1767-1774.
21. Midgley CA, Murray NE (1985): T4 polynucleotide kinase; cloning of the gene (pseT) and amplification of its product. EMBO J 4:2695-2703.
22. O'Farrell PH (1975): High resolution two-dimensional electrophoresis of proteins. J Biol Chem 250:4007-4021.
23. Ohmura Y, Uchida T, Teraoka H, and Tsukada K. (1987): Detection in situ of active polypeptides of mammalian and T4 DNA kinases after sodium dodecyl sulfate/polyacrylamide gel electrophoresis. Eur J Biochem 162:15-18.
24. Pheiffer BH, Zimmerman SB (1982): 3′-Phosphatase activity of the DNA kinase from rat liver. Biochem Biophys Res Commun 109:1297-1302.
25. Pohjanpelto P, Hölttä E (1996): Phosphorylation of Okazaki-like DNA fragments in mammalian cells and role of polyamines in the processing of this DNA. EMBO J 15:1193-1200.
26. Prasad R, Beard WA, Wilson, SH (1994): Studies of gapped DNA substrate binding by mammalian DNA polymerase beta. Dependence on 5′-phosphate group. J Biol Chem 269:18096-18101.
27. Prinos P, Slack C, Lasko DD (1995): 5′phosphorylation of DNA in mammalian cells: Identification of a polymin P-precipitable polynucleotide kinase. J Cell Biochem 58: 115-131.
28. Richardson CC (1965): Phosphorylation of nucleic acid by an enzyme from T4 bacteriophage-infected Escherichia coli. Proc Natl Acad Sci U S A 54:158-165.
29. Richardson CC (1971): Polynucleotide kinase from Escherichia coli infected with bacteriophage T4. In Cantoni GL, Davies DR (eds): "Procedures in Nucleic Acid Research, Vol. 2." New York: Harper and Row, pp 815-828.
30. Singhal RK, Wilson SH (1993): Short gap-filling synthesis by DNA polymerase beta is processive. J Biol Chem 268:15906-15911.
31. Tamura S, Teraoka H, Tsukada K (1981): Characterization of DNA kinase from calf thymus. Eur J Biochem 115:449-453.
32. Teraoka H, Mizuta K, Sato F, Shimoyachi M, Tsukada K (1975): Polynucleotide kinase from rat-liver nuclei. Purification and properties. Eur J Biochem 58:297-302.
33. Torriglia A, Chaudun E, Chany-Fournier F, Jeanny J-C, Courtois Y, Counis M-F (1995): Involvement of DNasp II in nuclear degeneration during lens cell differentiation. J Biol Chem 270:28579-28585.
34. Wray W, Boulikas T, Wray VP, Hancock R (1981): Silver staining of proteins in polyacrylamide gels. Anal Biochem 118:197-203.