Structural analysis of Z-Z DNA junctions with A:A and T:T mismatched base pairs by NMR

Biochemistry

Volumn 36, Issue 14, 1997, Pages 4258-4267

  Yang, Xiang Lei ^a   Wang, Andrew H J ^a  

^a UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA Z;

ARTICLE; BASE MISPAIRING; BASE PAIRING; DNA CONFORMATION; DNA SEQUENCE; GENOME; MOLECULAR DYNAMICS; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL;

ADENINE; BASE COMPOSITION; DNA; HYDROGEN BONDING; MAGNETIC RESONANCE SPECTROSCOPY; METHANOL; MODELS, MOLECULAR; NUCLEIC ACID CONFORMATION; OLIGODEOXYRIBONUCLEOTIDES; THYMINE;

EID: 0030980019     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi962937b     Document Type: Article

References (26)

1. Arnold, F. H., Wolk, S., Cruz, P., & Tinoco, I. Jr. (1987) Biochemistry 26, 4068-4075.
2. Behe, M., & Felsenfeld, G. (1981) Proc. Natl. Acad. Sci. U.S.A. 78, 1619-1623.
3. Brünger, A. X-PLOR (version 3.1) (1992), The Howard Hughes Medical Institute and Yale University, New Haven, CT.
4. Ellison, M. J., Feigon, J., Kelleher, R. J., Wang, A. H.-J., Habener, J. F., & Rich, A. (1986) Biochemistry 25, 3648-3655.
5. Ellison, M. J., Kelleher, R. J., Wang, A. H.-J., Habener, J. F., & Rich, A. (1985) Proc. Natl. Acad. Sci. U.S.A. 82, 8320-8324.
6. Feigon, J., Wang, A. H.-J., van der Marel, G. A., van Boom, J. H., & Rich, A. (1984) Nucleic Acids Res. 12, 1243-1263.
7. Feigon, J., Wang, A. H.-J., van der Marel, G. A., van Boom, J. H., & Rich, A. (1985) Science 230, 82-84.
8. Gervais, V., Cognet, J. A., Le Bret M., Sowers, L. C., & Fazakerley G. V. (1995) Eur. J. Biochem. 228, 279-290.
9. Herbert, A., Lowenhaupt, K., Spitzer, J., & Rich, A. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 7550-7554.
10. Herbert, A., & Rich, A. (1996) J. Biol. Chem. 271, 11595-11598.
11. Hore, P. J. (1983) J. Magn. Reson. 54, 539-542.
12. Johnston, B. H., Quigley, G. J., Ellison, M. J., & Rich, A. (1991) Biochemistry 30, 5257-5263.
13. Kochoyan, M., Leroy, J. L., & Gueron, M. (1990) Biochemistry 29, 4799-4805.
14. Lian, C., Robinson, H. and Wang, A. H.-J. (1996) J. Am. Chem. Soc. 118, 8791-8801.
15. Moller, A., Nordheim, A., Kozlowski, S. A., Patel, D. J., & Rich, A. (1984) Biochemistry 23, 54-62.
16. Orbons, L. P., van der Marel, G. A., van Boom, J. H., & Altona, C. (1986) Eur. J. Biochem. 160, 131-139.
17. Pohl, F. M., & Jovin, T. M. (1972) J. Mol. Biol. 67, 375-396.
18. Rich, A., Nordheim, A., & Wang, A. H.-J. (1984) Annu. Rev. Biochem. 53, 791-846.
19. Robinson, H., & Wang, A. H.-J. (1992) Biochemistry 31, 3524-3533.
20. Schroth, G. P., Chou, P.-J., & Ho, P. S. (1992) J. Biol. Chem. 267, 11846-11855.
21. Sinden, R. R. (1994) DNA Structure and Function, Academic Press: New York.
22. Sklenar, V., Brooks, B. R., Zon, G., & Bax, A. (1987) J. Magn. Reson. 75, 352-357.
23. States, D. J., Haberkorn, R. A., & Ruben, D. J. (1982) J. Magn. Reson. 48, 286-292.
24. Stolarski, R., Buck, F., Fera, B., & Ruterjans, H. (1987) Eur. J. Biochem. 169, 603-609.
25. Sugiyama, H., Kawai, K., Matsunaga, A., Fujimoto, K., Saito, I., Rosinson, H., & Wang, A. H.-J. (1996) Nucleic Acids Res. 24, 1272-1278.
26. Wang, A. H.-J., Quigley, G. J., Kolpak, F. J., Crawford, J. L., van Boom, J. H., van der Marel, G. A., & Rich, A. (1979) Nature 282, 680-682.