The binding of a Fos/Jun heterodimer can completely disrupt the structure of a nucleosome

EMBO Journal

Volumn 16, Issue 8, 1997, Pages 2072-2085

  Ng, Kean Wooi ^a   Ridgway, Patricia ^a   Cohen, Donna Ruth ^b   Tremethick, David John ^a  

^a AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

^b AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

Author keywords

Chromatin; Histone acetylation; Nucleosome disruption; Transcription factors

Indexed keywords

HISTONE; ONCOPROTEIN; TRANSCRIPTION FACTOR;

ACETYLATION; ANIMAL CELL; ARTICLE; BINDING AFFINITY; BINDING SITE; CHROMATIN STRUCTURE; CONTROLLED STUDY; MOUSE; NONHUMAN; NUCLEOSOME; ONCOGENE C FOS; ONCOGENE C JUN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DNA BINDING; RAT;

ACETYLATION; ANIMALS; BASE SEQUENCE; CHICKENS; DIMERIZATION; DNA; DNA-BINDING PROTEINS; FOS-RELATED ANTIGEN-2; HISTONES; LEUCINE ZIPPERS; MICE; MOLECULAR SEQUENCE DATA; NUCLEAR PROTEINS; NUCLEOSOMES; PROMOTER REGIONS (GENETICS); PROTEIN BINDING; PROTO-ONCOGENE PROTEINS C-FOS; PROTO-ONCOGENE PROTEINS C-JUN; RATS; SEX-DETERMINING REGION Y PROTEIN; TRANSCRIPTION FACTOR AP-1; TRANSCRIPTION FACTORS; XENOPUS LAEVIS;

ANIMALIA;

EID: 0030967242     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/16.8.2072     Document Type: Article

References (55)

1. Abate, C., Luk, D., Gagne, E., Roeder, R.G. and Curran, T. (1990) Fos and jun cooperate in transcriptional regulation via heterologous activation domains. Mol. Cell. Biol., 10, 5532-5535.
2. Adams, C.C. and Workman, J.L. (1995) Binding of disparate transcriptional activators to nucleosomal DNA is inherently cooperative. Mol. Cell. Biol., 15, 1405-1421.
3. Angel, P. and Karin, M. (1991) The role of Jun, Fos and the AP-1 complex in cell-proliferation and transformation. Biochim. Biophys. Acta, 1072, 129-157.
4. Archer, T.K., Cordingley, M.G., Wolford, R.G. and Hager, G.L. (1991) Transcription factor access is mediated by accurately positioned nucleosomes on the mouse mammary tumor virus promoter. Mol. Cell. Biol., 11, 688-698.
5. Bauer, W.R., Hayes, J.J., White, J.H. and Wolffe, A.P. (1994) Nucleosome structural changes due to acetylation. J. Mol. Biol. 236, 685-690.
6. Becker, P.B. (1994) The establishment of active promoters in chromatin. BioEssays, 16, 541-547.
7. Bergers, G., Graninger, P., Braselmann, S., Wrighton, C. and Busslinger, M. (1995) Transcriptional activation of the fra-1 gene by AP-1 is mediated by regulatory sequences in the first intron. Mol. Cell. Biol., 15, 3748-3758.
8. Berta, P., Hawkins, J.R., Sinclair, A.H., Taylor, A., Griffiths, B.L., Goodfellow, P.N. and Fellous, M. (1990) Genetic evidence equating SRY and the testis-determining factor. Nature, 348, 448-450.
9. Blomquist, P., Li, Q. and Wrange, O. (1996) The affinity of nuclear factor 1 for its DNA site is drastically reduced by nucleosome organization irrespective of its rotational or translational position. J. Biol. Chem., 271, 153-159.
10. Bouvet, P., Dimitrov, S. and Wolffe, A.P. (1994) Specific regulation of Xenopus chromosomal 5S rRNA gene transcription in vivo by histone H1. Genes Dev., 8, 1147-1159.
11. Chen, H., Li, B. and Workman, J.L. (1994) A histone-binding protein, nucleoplasmin, stimulates transcription factor binding to nucleosomes and factor-induced nucleosome disassembly. EMBO J., 13, 380-390.
12. Cohen, R.D., Sinclair, A.H. and McGovern, J.D. (1994) SRY protein enhances transcription of Fos-related antigen 1 promoter constructs. Proc. Natl Acad. Sci. USA, 91, 4372-4376.
13. Dimitrov, S., Almouzni, G., Dasso, M. and Wolffe, A.P. (1993) Chromatin transitions during early Xenopus embryogenesis: changes in histone H4 acetylation and in linker histone type. Dev. Biol., 160, 214-227.
14. Foletta, V.C., Sonobe, M.H., Suzuki, T., Endo, T., Iba, H. and Cohen, D.R. (1994) Cloning and characterisation of the mouse fra-2 gene. Oncogene, 9, 3305-3311.
15. Giese, K., Cox, J. and Grossehedl, R. (1992) The HMG domain of lymphoid enhancer factor 1 bends DNA and facilitates assembly of functional nucleoprotein structures. Cell, 69, 185-195.
16. Glover, J.N.M. and Harrison, S.C. (1995) Crystal structure of the heterodimeric bZIP transcription factor c-Fos-c-Jun bound to DNA. Nature, 373, 257-261.
17. Hong, L., Schroth, G.P., Matthews, H.R., Yau, P. and Bradbury, E.M. (1993) Studies of the DNA binding properties of histone H4 amino terminus. J. Biol. Chem., 268, 305-314.
18. Kamakaka, R.T., Bulger M. and Kadonaga, J.T. (1993) Potentiation of RNA polymerase II transcription by Ga14-VP16 during but not after DNA replication and chromatin assembly. Genes Dev., 7, 1779-1795.
19. Karin, M. (1995) The regulation of AP-1 activity by mitogen-activated protein kinases. J. Biol. Chem., 270, 16483-16486.
20. Kerppola, T.K. (1996) Fos and Jun bend the AP-1 site: effects of probe geometry on the detection of protein-induced DNA bending. Proc. Natl Acad. Sci. USA, 93, 10117-10122.
21. Kerppola, T.K. and Curran, T. (1991a) Transcription factor interactions: basics on zippers. Curr. Opin. Struct. Biol., 1, 71-79.
22. Kerppola, T.K. and Curran, T. (1991b) Fos-Jun heterodimers and Jun homodimers bend DNA in opposite orientations: implications for transcription factor cooperativity. Cell, 66, 317-326.
23. Kerppola, T.K. and Curran, T. (1993) Selective DNA bending by a variety of bZIP proteins. Mol. Cell. Biol., 13, 5479-5489.
24. Lee, D.Y., Hayes, J.J., Pruss, D. and Wolffe, A.P. (1993) A positive role for histone acetylation in transcription factor access to nucleosomal DNA. Cell, 72, 73-84.
25. Li, B., Adams, C.C. and Workman, J.L. (1994) Nucleosome binding by the constitutive transcription factor Sp1. J. Biol. Chem., 269, 7756-7763.
26. Li, Q. and Wrange, O. (1995) Accessibility of a glucocorticoid response element in a nucleosome depends on its rotational positioning. Mol. Cell. Biol., 15, 4375-4384.
27. Li, W., Nagaraja, S., Delcuve, G.P., Hendzel, M.J. and Davie, J.R. (1993) Effects of histone acetylation, ubiquitination and variants on nucleosome stability. Biochem. J., 296, 737-744.
28. Mahadevan, L.C. Willis, A.C. and Barratt, M.J. (1991) Rapid histone H3 phosphorylation in response to growth factors, phorbol esters, okadaic acid, and protein synthesis inhibitors. Cell, 65, 775-783.
29. Norton, V.G., Marvin, K.W., Yau, P. and Bradbury, E.M. (1990) Nucleosome linking number change controlled by acetylation of histones H3 and H4. J. Biol. Chem., 265, 19848-19852.
30. Pennings, S., Meersseman, G. and Bradbury, E.M. (1991) Mobility of positioned nucleosomes on 5S rDNA. J. Mol. Biol., 220, 101-110.
31. Peterson, C.L. and Tamkun, J.W. (1995) The SWI-SNF complex: a chromatin remodeling machine? Trends Biochem. Sci., 20, 143-146.
32. Pruss, D. and Wolffe, A.P. (1993) Histone-DNA contacts in a nucleosome core containing a Xenopus 5S rRNA gene. Biochemistry, 32, 6810-6814.
33. Schwarz, P.M. and Hansen, J.C. (1994) Formation and stability of higher order chromatin structures. J. Biol. Chem., 269, 16284-16289.
34. Shrader, T.E. and Crothers, D.M. (1989) Artificial nucleosome positioning sequences. Proc. Natl Acad. Sci. USA, 86, 7418-7422.
35. Simpson, R.T. (1978) Structure of chromatin containing extensively acetylated H3 and H4. Cell, 13, 691-699.
36. Taylor, I.C., Workman, J.L., Schuetz, T.J. and Kingston, R.E. (1991) Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: differential function of DNA-binding domains. Genes Dev., 5, 1285-1298.
37. Tremethick, D.J. (1994) High mobility group proteins 14 and 17 can space nucleosomal particles deficient in histones H2A and H2B creating a template that is transcriptionally active. J. Biol Chem., 269, 28436-28442.
38. Tremethick, D.J. (1996) High mobility group proteins 14 and 17 can prevent the close packing of nucleosomes by increasing the strength of protein contacts in the linker DNA. J. Biol. Chem., 271, 12009-12016.
39. Tremethick, D.J. and Drew, H.R. (1993) High mobility group proteins 14 and 17 can space nucleosomes in vitro. J. Biol. Chem., 268, 11389-11393.
40. Tremethick, D.J. and Frommer, M. (1992) Partial purification, from Xenopus laevis oocytes, of an ATP-dependent activity required for nucleosome spacing in vitro. J. Biol. Chem., 267, 15041-15048.
41. Tremethick, D., Zucker, K. and Worcel, A. (1990) The transcription complex of the 5S RNA gene, but not transcription factor IIIA alone, prevents nucleosomal repression of transcription. J. Biol. Chem., 265, 5014-5023.
42. Tsukiyama, T. and Wu, C. (1995) Purification and properties of an ATP-dependent nucleosome remodeling factor. Cell, 83, 1011-1020.
43. Ura, K., Hayes, J. and Wolffe, A.P. (1995) Positive role for nucleosome mobility in the transcriptional activity of chromatin templates: restriction by linker histones. EMBO J., 14, 3752-3765.
44. Van Lint, C., Emiliani, S., Ott, M. and Verdin, E. (1996) Transcriptional activation and chromatin remodeling of the HIV-1 promoter in response to histone acetylation. EMBO J., 15, 1112-1120.
45. Verdin, E., Paras, P., Jr and Van Lint, C. (1993) Chromatin disruption in the promoter of human immunodeficiency virus type 1 during transcriptional activation. EMBO J., 12, 3249-3259.
46. Vettese Dadey, M., Walter, P., Chen, H., Juan, L.J. and Workman, J.L. (1994) Role of the histone amino termini in facilitated binding of a transcription factor, GAL4-AH. to nucleosome cores. Mol. Cell. Biol., 14, 970-981.
47. Wallrath, L.L., Lu, Q., Granok, H. and Elgin, S.C. (1994) Architectural variations of inducible eukaryotic promoters: preset and remodeling chromatin structures. BioEssays, 16, 165-170.
48. Walter, P.P., Owen Hughes, T.A., Cote, J. and Workman, J.L. (1995) Stimulation of transcription factor binding and histone displacement by nucleosome assembly protein 1 and nucleoplasmin requires disruption of the histone octamer. Mol. Cell. Biol., 15, 6178-6187.
49. Wechsler, D.S., Papoulas, O., Dang, C.V. and Kingston, R.E. (1994) Differential binding of c-Myc and Max to nucleosomal DNA. Mol. Cell. Biol., 14, 4097-4107.
50. Weischet, W.O., Allen, J.R., Riedel, G. and Van Holde, K.E. (1979) The effects of salt concentration and H1 depletion on the digestion of calf thymus chromatin by micrococcal nuclease. Nucleic Acids Res., 6, 1843-1862.
51. Wolffe, A.P. (1991) Implications of DNA replication for eukaryotic gene expression. J. Cell Sci., 99, 201-206.
52. Wolffe, A.P. (1994) Transcription: in tune with the histones. Cell, 77, 13-16.
53. Workman, J.L. and Buchman, A.R. (1993) Multiple functions of nucleosomes and regulatory factors in transcription. Trends Biochem. Sci., 18, 90-95.
54. Workman, J.L., Taylor, I.C. and Kingston, R.E. (1991) Activation domains of stably bound GAL4 derivatives alleviate repression of promoters by nucleosomes. Cell, 64, 533-544.
55. Zucker, K. and Worcel, A. (1990) The histone H3/H4.N1 complex supplemented with histone H2A-H2B dimers and DNA topoisomerase I forms nucleosomes on circular DNA under physiological conditions. J. Biol. Chem., 265, 14487-14496.