Plasmid integration in a wide range of bacteria mediated by the integrase of Lactobacillus delbrueckii bacteriophage mv4

Journal of Bacteriology

Volumn 179, Issue 6, 1997, Pages 1837-1845

  Auvray, Frédéric ^a   Coddeville, Michéle ^a   Ritzenthaler, Paul ^a,b   Dupont, Laurence ^a  

^a UPS   (France)

^b CNRS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL GENETICS; BACTERIOPHAGE; GENE ISOLATION; GENE SEQUENCE; GENE TRANSFER; GENETIC MANIPULATION; GENETIC RECOMBINATION; LACTOBACILLUS DELBRUECKII; NONHUMAN; PRIORITY JOURNAL; SEQUENCE ANALYSIS;

EID: 0030905063     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.179.6.1837-1845.1997     Document Type: Article

References (49)

1. Alegre, M. T., B. Cournoyer, J. M. Mesas, M. Guerineau, P. Normand, and J. L. Pernodet. 1994. Cloning of Frankia species putative tRNA proline genes and their efficacy for pSAM2 site-specific integration in Streptomyces lividans. Appl. Environ. Microbiol. 60:4279-4283.
2. Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
3. Atlung, T., A. Nielson, L. J. Rasmussen, L. J. Nellemann, and F. Holm. 1991. A versatile method for integration of genes and gene fusions into the lambda attachment site of Escherichia coli. Gene 107:11-17.
4. Bar-Nir, D., A. Cohen, and M. Goedeke. 1992. tDNAser sequences are involved in the excision of the Streptomyces griseus plasmid pSG1. Gene 122:71-76.
5. Barreiro, V., and E. Haggard-Ljungquist. 1992. Attachment sites for bacteriophage P2 on the Escherichia coli chromosome: DNA sequences, localization on the physical map, and detection of a P2-like remnant in E. coli K-12 derivatives. J. Bacteriol. 174:4086-4093.
6. Brown, D. P., K. B. Idler, D. Backer, S. Donadio, and L. Katz. 1994. Characterization of the genes and attachment sites for site-specific integration of plasmid pSE101 in Saccharopolyspora erythraea and Streptomyces lividans. Mol. Gen. Genet. 242:185-193.
7. Brown, D. P., K. B. Idler, and L. Katz. 1990. Characterization of the genetic elements required for site-specific integration of plasmid pSE211 in Saccharopolyspora erythraea. J. Bacteriol. 172:1877-1888.
8. Campbell, A. 1962. Episomes. Adv. Genet. 11:101-145.
9. Campbell, A. 1992. Chromosomal insertion sites for phages and plasmids. J. Bacteriol. 174:7495-7499.
10. Chassy, B., and J. Flickinger. 1987. Transformation of Lactobacillus casei by electroporation. FEMS Microbiol. Lett. 44:173-177.
11. Chopin, A., M.-C. Chopin, A. Moillo-Batt, and P. Langella. 1984. Two plasmid-determined restriction and modification systems in Streptococcus lactis. Plasmid 11:260-263.
12. Christiansen, B., L. Brondsted, F. K. Vogensen, and K. Hammer. 1996. A resolvase-like protein is required for the site-specific integration of the tem perate lactococcal bacteriophage TP901-1. J. Bacteriol, 178:5164-5173.
13. Cluzel, J. P., M. Vaux, M. Rousseau, and J. P. Accolas. 1987. Evidence for temperate bacteriophages in two strains of Lactobacillus bulgaricus. J. Dairy Res. 54:397-405.
14. De Man, J. C., M. Rogosa, and M. E. Sharpe. 1960. A medium for cultivation of lactobacilli. J. Appl. Bacteriol. 23:130-135.
15. Dupont, L., B. Boizet-Bonhoure, M. Coddeville, F. Auvray, and P. Ritzenthaler. 1995. Characterization of genetic elements required for site-specific integration of Lactobacillus delbrueckii subsp. bulgaricus bacteriophage mv4 and construction of an integration-proficient vector for Lactobacillus plantarum. J. Bacteriol. 177:586-595.
16. 15a.Frére, J., et al. Unpublished data.
17. arg(ACG) gene of Streptomyces rimosus. Nucleic Acids Res. 23:58-63.
18. Gasson, M. J. 1983. Plasmid complements of Streptococcus lactis NCDO 712 and other lactic streptococci after protoplast-induced curing. J. Bacteriol. 154:1-9.
19. Griffin, H. G., and M. J. Gasson. 1995. Genetics aspects of aromatic amino acid biosynthesis in Lactococcus lactis. Mol. Gen. Genet. 246:119-127.
20. Hayashi, T., H. Matsumoto, M. Ohnishi, and Y. Terawaki. 1993. Molecular analysis of a cytotoxin-converting phage, φCTX, of Paeudomonas aeruginosa: structure of the attP-cos-ctx region and integration into the serine tRNA gene. Mol. Microbiol. 7:657-667.
21. Hottinger, H., T. Ohgi, M. Zwahlen, S. Dhamija, and D. Soil. 1987. Alletespecific complementation of an Escherichia coli leuB mutation by a Lactobacillus bulgaricus tRNA gene. Gene 60:75-83.
22. Inouye, S., M. G. Sunshine, E. W. Six, and M. Inouye. 1991. Retronphage φR73: an E. coli phage that contains a retroelement and integrates into a tRNA gene. Science 252:969-971.
23. Jakob, A. E., and S. J. Hobbs. 1974. Conjugal transfer to plasmid-borne antibiotic resistance in Streptococcus faecalis var. zymogenes, J. Bacteriol. 117:360-372.
24. Lahbib-Mansais, V., B. Boizet, L. Dupont, M. Mata, and P. Ritzenthaler. 1992. Characterization of a temperate bacteriophage of Lactobacillus delbrueckii subsp. bulgaricus and its interaction with the host cell chromosome. J. Gen. Microbiol. 138:1139-1146.
25. Le Bourgeois, P., M. Lautier, L. van den Berghe, M. J. Gasson, and P. Ritzenthaler. 1995. Physical and genetic map of the Lactococcus lactis subsp. cremoris MG1363 chromosome: comparison with that of Lactococcus lactis subsp. lactis IL1403 reveals a large genome inversion. J. Bacteriol. 177:2840-2850.
26. Lee, C. Y., S. L. Buranen, and Z. H. Ye. 1991. Construction of a single-copy integration vectors for Staphylococcus aureus. Gene 103:101-105.
27. Lee, M., L. Pascopella, W. Jacobs, Jr., and G. Hatfull. 1991. Site-specific integration of mycobacteriophage L5: integration-proficient vectors for Mycobacterium smegmatis, Mycobacterium tuberculosis, and bacille Calmette- Guérin. Proc. Natl. Acad. Sci. USA 88:3111-3115.
28. Leer, J., N. Van Luijk, M. Posno, and P. Pouwels. 1992. Structural and functional analysis of two cryptic plasmids from Lactobacillus pentosus MD353 and Lactobacillus plantarum ATCC8014. Mol. Gen. Genet. 234:265-274.
29. Le Marrec, C., S. Moreau, S. Loury, C. Blanco, and A. Trautwetter. 1996. Genetic characterization of site-specific integration functions of φAAU2 infecting "Arthrobacter aureus" C70. J. Bacteriol. 178:1996-2004.
30. Martin, B., P. Garcia, M. P. Castanié, and J. P. Claverys. 1995. The recA gene of Streptococcus pneumonias is part of a competence-induced operon and controls lysogenic induction. Mol. Microbiol. 15:367-379.
31. Martin, B., H. Prats, and J. P. Claverys. 1985. Cloning of the hexA mismatch repair of Streptococcus pneumoniae and identification of the product. Gene 34:293-303.
32. Martin, C., P. Mazodier, M. V. Mediola, B. Gicquel, T. Smokvina, C. J. Thompson, and J. Davies, 1991. Site-specific integration of the Streptomyces plasmid pSAM2 in Mycobacterium smegmatis. Mol. Microbiol. 5:2499-2502.
33. Mazodier, P., C. Thompson, and F. Boccard. 1990. The chromosomal integration site of the Streptomyces element pSAM2 overlaps a putative tRNA gene conserved among actinomycetes. Mol. Gen. Genet. 222:431-434.
34. Papp, I., L. Dorgai, P. Papp, E. Jonas, F. Olasz, and L. Orosz. 1993. The bacterial attachment site of the temperate Rhizobium phage 16-3 overlaps the 3′ end of a putative proline tRNA gene. Mol. Gen. Genet. 240:258-264.
35. Pearson, W. R., and D. J. Lipman. 1988. Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85:2444-2448.
36. Porter, R. D., and W. R. Guild. 1976. Characterization of some pneumococcal bacteriophages. J. Virol. 19:659-667.
37. Powell, I. B., M. G. Achen, A. J. Millier, and B. E. Davidson. 1988. A simple and rapid method for genetic transformation of lactic streptococci by electroporation. Appl. Environ. Microbiol. 54:655-660.
38. Raya, R., C. Fremaux, G. De Antonioni, and T. Klaenhammer. 1992. Site- specific integration of the temperate bacteriophage φadh into the Laciobocillus gasseri chromosome and molecular characterization of the phage (attP) and bacterial (attB) attachment sites. J. Bacteriol. 174:5584-5592.
39. Reiter, W., P. Palm, and S. Yeats. 1989. Transfer RNA genes frequently serve as integration sites for prokaryotic genetic elements. Nucleic Acids Res. 17:1907-1914.
40. Ross, W., and A. Landy. 1983. Patterns of λ Int recognition in the regions of strand exchange. Cell 33:261-272.
41. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
42. Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
43. Simon, D., and A. Chopin. 1988. Construction of a vector plasmid family and its use for molecular cloning in Streptococcus lactis. Biochimie 70:559-566.
44. Smokvina, T., P. Mazodier, F. Boccard, C. Thompson, and M. Guérineau. 1990. Construction of a series of pSAM2-based integrative vectors for use in actinomycetes. Gene 94:53-59.
45. Stark, W. M., M. R. Boocock, and D. J. Sherratt. 1992. Catalysis by site- specific recombinases. Trends Genet. 8:432-439.
46. Stover, C. K., V. F. de la Cruz, T. R. Fuerst, J. E. Burlein, L. A. Benson, L. T. Bennet, G. P. Bansal, J. F. Young, M. H. Lee, G. F. Hatfull, S. Snapper, R. G. Barletta, W. R. Jacobs, Jr., and B. R. Bloom. 1991. New use of BCG for recombinant vaccines. Nature 351:456-460.
47. Van de Guchte, M., C. Daly, G. F. Fitzgerald, and E. Arendt. 1994. Identification of int and attP on the genome of lactococcal bacteriophage Tuc2009 and their use for site-specific plasmid integration in the chromosome of Tuc2009-resistant Lactococcus lactis MG1363. Appl. Environ. Microbiol. 60:2324-2329.
48. Vrijbloed, J., J. Madon, and L. Dijkhuizen. 1994. A plasmid from the methylotrophic actinomycete Amycolatopsis methanolica capable of site-specific integration. J. Bacteriol. 176:7087-7090.
49. Wyckoff, H. A., and W. E. Sandine. 1991. Transformation of dairy Leuconostoc using plasmid vectors from Bacillus, Escherichia, and Lactococcus hosts. J. Dairy Res. 74:1454-1460.