A resolvase-like protein is required for the site-specific integration of the temperate lactococcal bacteriophage TP901-1

Journal of Bacteriology

Volumn 178, Issue 17, 1996, Pages 5164-5173

  Christiansen, Bettina ^a   BrØndsted, Lone ^a   Vogensen, Finn K ^b   Hammer, Karin ^a  

^a TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^b UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

RESOLVASE;

ARTICLE; BACTERIAL GENETICS; BACTERIOPHAGE; GENE EXPRESSION; GENE MUTATION; LACTOCOCCUS LACTIS; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL;

BACTERIA (MICROORGANISMS); LACTOCOCCUS; LACTOCOCCUS LACTIS SUBSP. CREMORIS; STREPTOCOCCUS; UNIDENTIFIED BACTERIOPHAGE;

EID: 0029789076     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.178.17.5164-5173.1996     Document Type: Article

References (37)

1. Argos, W., A. Landy, K. Abremski, J. B. Egan, E. Haggard-Ljungquist, R. H. Hoess, M. L. Kahn, B. Kalionis, S. V. L. Narayana, L. S. Pierson III, N. Sternberg, and J. M. Leong. 1986. The integrase family of site-specific recombinases: regional similarities and global diversity. EMBO J. 5:433-440.
2. Boyce, J. D., B. E. Davidson, and A. J. Hillier. 1995. Spontaneous deletion mutants of the Lactococcus lactis temperate bacteriophage BK5-T and localization of the BK5-T attP site. Appl. Environ. Microbiol. 61:4105-4109.
3. Braun, V., S. Hertwig, H. Neve, A. Geis, and M. Teuber. 1989. Taxonomic differentiation of bacteriophages of Lactococcus lactis by electron microscopy: DNA-DNA hybridization, and protein profiles. J. Gen. Microbiol. 135:2551-2560.
4. Carrasco, C. D., K. S. Ramaswamy, T. S. Ramasubramanian, and J. W. Golden. 1994. Anabaena xisF gene encodes a developmentally regulated site-specific recombinase. Genes Dev. 8:74-83.
5. Christiansen, B., M. G. Johnsen, E. Slenby, F. K. Vogensen, and K. Hammer. 1994. Characterization of the lactococcal temperate phage TP901-l and its site-specific integration. J. Bacteriol. 176:1069-1076.
6. Devereux, J., P. Haeberli, and O. Smithies. 1984. A comprehensive set of sequence analysis programs for VAX. Nucleic Acids Res. 12:387-395.
7. Dickely, F., D. Nilsson, E. B. Hansen, and E. Johansen. 1995. Isolation of Lactococcus lactis nonsense suppressors and construction of a food-grade cloning vector. Mol. Mocrobiol. 15:839-847.
8. Dupont, L., B. Boizet-Bonhoure, M. Coddeville, F. Auvray, and P. Ritzenthaler. 1995. Characterization of genetic elements required for site-specific integration of Lactobacillus debrueckii subsp. bulgaricus bacteriophage mv4 and construction of an integration-proficient vector for Lactobacillus plantarum. J. Bacteriol. 177:586-595.
9. Efstathiou, J. D., and L. L. McKay. 1977. Inorganic salts resistance associated with a lactose-fermenting plasmid in Streptococcus lactis. J. Bacteriol. 130:257-265.
10. Fremaux, C., G. L. De Antoni, R. R. Raya, and T. Klaenhammer. 1993. Genetic organization and sequence of the region encoding integrative functions from Lactobacillus gasseri temperate bacteriophage φadh. Gene 126:61-66.
11. Gasson, M. J. 1983. Plasmid complements of Streptococcus lactis NCDO 712 and other streptococci after protoplast-induced curing. J. Bacteriol. 154:1-9.
12. Grindley, N. D. F., M. R. Lauth, R. G. Wells, R. J. Wityk, J. J. Salvo, and R. R. Reed. 1982. Transposon-mediated site-specific recombination: identification of three binding sites for resolvase at the res sites of γδ and Tn3. Cell 30:19-27.
13. Hatfull, G. F., J. J. Salvo, E. E. Falvey, V. Rimphanichayakit, and N. D. F. Grindly. 1982. Site-specific recombination of the γδ resolvase. Symp. Soc. Gen. Microbiol. 43:149-181.
14. Holo, H., and I. F. Nes. 1989. High-frequency transformation, by electroporation of Lactococcus lactis subsp. cremoris grown with glycine in osmotically stabilized media. Appl. Environ. Microbiol. 55:3119-3123.
15. Jarvis, A. W., G. F. Fitzgerald, M. Mata, A. Mercenier, H. Neve, I. B. Powell, C. Ronda, M. Saxelin, and M. Teuber. 1991. Species and type phages of lactococcal bacteriophages. Intervirology 32:2-5.
16. Jarvis, A. W., V. R. Parker, and M. B. Biachin. 1992. Isolation and characterization of two temperate phages from Lactococcus lactis ssp. cremoris C3. Can. J. Microbiol. 38:398-404.
17. Johnsen, M. G. 1995. Ph.D. thesis. The Royal Veterinary and Agricultural University of Denmark, Copenhagen.
18. Jongeneel, C. V., J. Bouvier, and A. Bairoch. 1989. A unique signature identifies a family of zinc-dependent metallopeptidases. FEBS Lett. 242:211-214.
19. Kitts, P. A., L. S. Symington, P. Dyson, and D. J. Sherratt. 1983. Transposon-encoded site specific recombination: nature of the Tn3 sequences which constitute the recombination site res. EMBO J. 2:1055-1060.
20. Landt, O., H.-P. Grunert, and U. Hahn. 1990. A general method for rapid site-directed mutagenesis using the polyrnerase chain reaction. Gene 96:125-128.
21. Lillehaug, D., and N.-K. Birkeland. 1993. Characterization of genetic elements required for site-specific integration of the temperate lactococcal bacteriophage φLC3 and construction of integration-negative φLC3 mutants. J. Bacteriol. 175:1745-1755.
22. Marsh, J. L., M. Erfle, and E. J. Wykes. 1984. The pIC plasmid and phage vectors with versatile cloning sites for recombinant selection by insertional inactivation. Gene 32:481-485.
23. 22a.Matsuura, M., T. Noguchi, D. Yamaguchi, T. Aida, M. Asayama, H. Takahashi, and M. Shirai. 1996. The sre gene (ORF469) encodes a site-specific recombinase responsible for integration of the R4 phage genome. J. Bacteriol. 178:3374-3376
24. Murphy, J. P., G. Murphy, and J. Reynolds. 1991. The origin of matrix metalloproteinases and their familial relationships. FEBS Lett. 289:4-7..
25. Pargellis, C. A., S. E. Nunes-Dürby, L. Moitoso de Vargas, and A. Landy. 1988. Suicide recombination substrates yield covalent λ integrase DNA complexes and lead to identification of the active site tyrosine. J. Biol. Chem. 263:7678-7685.
26. Reed, R. R., and N. D. F. Grindley. 1981. Transposon-mediated site-specific recombination in vitro: DNA cleavage and protein-DNA linkage at the recombination site. Cell 25:721-728.
27. Reed, R. R., and C. D. Moser. 1984. Resolvase-mediated recombination intermediates contain a serine covalently linked to DNA. Cold Spring Harbor Symp. Quant. Biol. 49:245-249.
28. Rogowsky, P., and R. Schmitt. 1985. Tn1721-encoded resolvase: a structure of the tnpR gene and its in vitro functions. Mol. Gen. Genet. 200:176-181.
29. Salser, W. 1977. Globin mRNA sequences - analysis of base pairing and evolutionary implications. Cold Spring Harbor Symp. Quant. Biol. 42:985-1002.
30. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
31. Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
32. Saraste, M., P. R. Sibbald, and A. Wittinghofer. 1990. The P-loop - a common motif in ATP- and GTP-binding proteins. Trends Biochem. Sci. 15:430-434.
33. Sato, M., Y. Samori, and Y. Kobayashi. 1990. The cisA cistron of Bacillus subtilis sporulation gene spoIVC encodes a protein homologous to a site-specific recombinase. J. Bacteriol. 172:1092-1098.
34. Sherratt, D. 1988. Tn3 and related transposable elements: site-specific recombination and transposition, p. 163-184. In D. E. Berg and M. M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, D.C.
35. Simon, D., and A. Chopin. 1988. Construction of a vector plasmid family and its use for molecular cloning in Streptococcus lactis. Biochimie 70:559-566.
36. Terzaghi, B. E., and W. E. Sandine. 1975. Improved medium for lactic streptococci and their bacteriophages. Appl. Environ. Microbiol. 29:807-813.
37. van de Guchte, M., C. Daly, G. F. Fitzgerald, and E. Arendt. 1994. Identification of int and attP on the genome of lactococal bacteriophage Tuc2009 and their use for site-specific plasmid integration in the chromosome of Tuc2009-resistant Lactococcus lactis MG1363. Appl. Environ. Microbiol. 60:2324-2329.