-
1
-
-
0025878149
-
Amino acid substitution matrices from an information theoretic perspective
-
Altschul, S F (1991). Amino acid substitution matrices from an information theoretic perspective. JMB, 219, 555-565.
-
(1991)
JMB
, vol.219
, pp. 555-565
-
-
Altschul, S.F.1
-
2
-
-
0028289467
-
Issues in searching molecular sequence databases
-
Altschul, S.F et al. (1994). Issues in searching molecular sequence databases. Nature Genet. 6.119-129.
-
(1994)
Nature Genet
, vol.6
, pp. 119-129
-
-
Altschul, S.F.1
-
3
-
-
0028071564
-
The SWISS-PROT protein sequence data bank-current status
-
Bairoch.A. and Boeckmann, B. (1994). The SWISS-PROT protein sequence data bank-current status. Nucleic Acids Res., 22. 3578-3580.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 3578-3580
-
-
Bairoch, A.1
Boeckmann, B.2
-
4
-
-
0028111863
-
PROSITE: Recent developments
-
Bairoch.A. and Bucher, P. (1994). PROSITE: recent developments Nucleic Acids Res., 22, 3583-3589.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 3583-3589
-
-
Bairoch, A.1
Bucher, P.2
-
5
-
-
0028011075
-
Hidden Markov models of biological primary sequence information
-
Baldi.P., Chauvin.Y, Hunkapillar, T. and McClure.M (1994). Hidden Markov models of biological primary sequence information. Proc. Nail Acad. Sci. USA, 91, 1059-1063.
-
(1994)
Proc. Nail Acad. Sci. USA
, vol.91
, pp. 1059-1063
-
-
Baldi, P.1
Chauvin, Y.2
Hunkapillar, T.3
McClure, M.4
-
6
-
-
0028685354
-
A generalized profile syntax for biomolecular sequence motifs and its function in automatic sequence interpretation
-
AAA1/MIT Press, Menlo Park, CA, pp
-
Bucher, P. and Bairoch.A. (1994). A generalized profile syntax for biomolecular sequence motifs and its function in automatic sequence interpretation. In: ISMB-94. AAA1/MIT Press, Menlo Park, CA, pp. 5 3-61.
-
(1994)
ISMB-94
, pp. 3-61
-
-
Bucher, P.1
Bairoch, A.2
-
7
-
-
0030093114
-
A flexible motif search technique based on generalized profiles
-
Bucher, P, Karplus.K.. Moeri.N. and Hoffman.K. (1996). A flexible motif search technique based on generalized profiles. Comput. Client., 20, 3-24.
-
(1996)
Comput. Client.
, vol.20
, pp. 3-24
-
-
Bucher, P.1
Karplus, K.2
Moeri, N.3
Hoffman, K.4
-
8
-
-
0029174347
-
Multiple alignment using hidden Markov models
-
Rallings.C et al., AAA1/MIT Press. Menlo Park, CA. pp
-
Eddy, S. (1995). Multiple alignment using hidden Markov models. In Rallings.C et al. (eds), ISMB-95, AAA1/MIT Press. Menlo Park, CA. pp. 114-120.
-
(1995)
ISMB-95
, pp. 114-120
-
-
Eddy, S.1
-
9
-
-
0029259085
-
Maximum discrimination hidden Markov models of sequence consensus
-
Eddy, S., Mitchison, G. and Durbin.R. (1995). Maximum discrimination hidden Markov models of sequence consensus. J. Comput. Bioi, 2, 9-23.
-
(1995)
J. Comput. Bioi
, vol.2
, pp. 9-23
-
-
Eddy, S.1
Mitchison, G.2
Durbin, R.3
-
10
-
-
0020484488
-
An improved algorithm for matching biological sequences
-
Gotoh.O. (1982). An improved algorithm for matching biological sequences. JMB, 162, 705-708
-
(1982)
JMB
, vol.162
, pp. 705-708
-
-
Gotoh, O.1
-
11
-
-
84968924443
-
Protein modeling using hidden Markov models: Analysis of globins
-
Vol., IEEE Computer Society Press, Los Alamitos. CA, pp
-
Haussler, D., Krogh, A., Mian, I.S. and Sjolander.K. (1993). Protein modeling using hidden Markov models: Analysis of globins. In: Proceedings of the Hawaii International Conference on System Sciences. Vol. 1. IEEE Computer Society Press, Los Alamitos. CA, pp 792-802.
-
(1993)
Proceedings of the Hawaii International Conference on System Sciences
, vol.1
, pp. 792-802
-
-
Haussler, D.1
Krogh, A.2
Mian, I.S.3
Sjolander, K.4
-
12
-
-
0028043552
-
Position-based sequence weights
-
Henikoff.S. and Henikoff.J.G. (1994). Position-based sequence weights. JMB, 243.574-578.
-
(1994)
JMB
, pp. 574-578
-
-
Henikoff, S.1
Henikoff, J.G.2
-
13
-
-
0029918694
-
The FSSP database: Fold classification based on structure-structure alignment of proteins
-
Holm.L. and Sander, C. (1996). The FSSP database: Fold classification based on structure-structure alignment of proteins. Nucleic Acids Res., 24, 206— 209
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 206-209
-
-
Holm, L.1
Sander, C.2
-
14
-
-
0029887381
-
Hidden Markov models for sequence analysis: Extension and analysis of the basic method
-
Hughey.R. and Krogh, A. (1996). Hidden Markov models for sequence analysis: Extension and analysis of the basic method. Comput. Applic. Biosci., 12, 95-107.
-
(1996)
Comput. Applic. Biosci.
, vol.12
, pp. 95-107
-
-
Hughey, R.1
Krogh, A.2
-
15
-
-
0028181441
-
Hidden Markov models in computational biology: Applications to protein modeling
-
Krogh, A., Brown, M., Mian, I.S., Sjolander, K. and Haussler, D. (1994). Hidden Markov models in computational biology: Applications to protein modeling. JMB, 235,1501-1531.
-
(1994)
JMB
, vol.235
, pp. 1501-1531
-
-
Krogh, A.1
Brown, M.2
Mian, I.S.3
Sjolander, K.4
Haussler, D.5
-
16
-
-
0030332516
-
Parameterization studies for the SAM and HMMER methods of hidden Markov model generation
-
St Louis, pp
-
McClure.M., Smith, C. and Elton.P. (1996). Parameterization studies for the SAM and HMMER methods of hidden Markov model generation. In: ISMB-96 AAAI Press, St Louis, pp. 155-164.
-
(1996)
ISMB-96 AAAI Press
, pp. 155-164
-
-
McClure, M.1
Smith, C.2
Elton, P.3
-
17
-
-
0027194328
-
Discovering simple DNA sequences by the algorithmic similarity method
-
Milosavljevic, A. and Jurka, J. (1993). Discovering simple DNA sequences by the algorithmic similarity method. Comput. Applic. Biosci., 9, 407-411.
-
(1993)
Comput. Applic. Biosci.
, vol.9
, pp. 407-411
-
-
Milosavljevic, A.1
Jurka, J.2
-
18
-
-
0025311949
-
Evolution of EF-hand calcium-modulated proteins. I. Relationships based on amino acid sequences
-
Moncrief, N.D., Kretsinger, R.H. and Goodman, M. (1990). Evolution of EF-hand calcium-modulated proteins. I. Relationships based on amino acid sequences. J. Mol. Evoi, 30, 522-562.
-
(1990)
J. Mol. Evoi
, vol.30
, pp. 522-562
-
-
Moncrief, N.D.1
Kretsinger, R.H.2
Goodman, M.3
-
19
-
-
0026771336
-
Evolution of EF-hand calcium-modulated proteins, ii. Domains of several subfamilies have diverse evolutionary histories
-
Nakayama.S., Moncrief, N.D. and Kretsinger, R.H (1992). Evolution of EF-hand calcium-modulated proteins, ii. Domains of several subfamilies have diverse evolutionary histories./ Mol. Evoi, 34, 416-448.
-
(1992)
Mol. Evoi
, vol.34
, pp. 416-448
-
-
Nakayama, S.1
Moncrief, N.D.2
Kretsinger, R.H.3
-
21
-
-
0026030641
-
Database of homology-derived protein structures and the structural meaning of sequence alignment
-
Sander.C. and Schneider, R. (1991). Database of homology-derived protein structures and the structural meaning of sequence alignment. Proteins, 9, 56-68.
-
(1991)
Proteins
, vol.9
, pp. 56-68
-
-
Sander, C.1
Schneider, R.2
-
22
-
-
0029906607
-
Dirichlet mixtures: A method for improving detection of weak but significant protein sequence homology
-
Sjolander.K., Karplus.K., Brown, M.P., Hughey, R., Krogh, A., Mian.I.S. and Haussler.D. (1996). Dirichlet mixtures: A method for improving detection of weak but significant protein sequence homology. Comput. Applic. Biosci., 12, 327-345.
-
(1996)
Comput. Applic. Biosci.
, vol.12
, pp. 327-345
-
-
Sjolander, K.1
Karplus, K.2
Brown, M.P.3
Hughey, R.4
Krogh, A.5
Mian, I.S.6
Haussler, D.7
-
23
-
-
0019887799
-
Identification of common molecular subsequences
-
Smith, T.F. and Waterman, M.S. (1981). Identification of common molecular subsequences. JMB, 147, 195-197.
-
(1981)
JMB
, vol.147
, pp. 195-197
-
-
Smith, T.F.1
Waterman, M.S.2
|