Multiple class I motifs revealed by sequencing naturally processed peptides eluted from rat T cell MHC molecules

Journal of Neuroscience Research

Volumn 49, Issue 1, 1997, Pages 107-116

  Burrows, G G ^a   Ariail, K ^b   Celnik, B ^b   Gambee, J E ^c   Offner, H ^a,b   Vandenbark, A A ^a,b  

^a OREGON HEALTH AND SCIENCE UNIVERSITY   (United States)

^b PORTLAND VA MEDICAL CENTER   (United States)

^c SHRINERS HOSPITAL FOR CHILDREN   (United States)

Author keywords

EAE; Immunoregulation; Lewis rat; Peptide binding motif

Indexed keywords

MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 1;

AMINO ACID SEQUENCE; ANIMAL CELL; ANTIGEN EXPRESSION; ANTIGEN RECOGNITION; ARTICLE; CARBOXY TERMINAL SEQUENCE; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; IMMUNOREGULATION; MAJOR HISTOCOMPATIBILITY COMPLEX; NONHUMAN; PRIORITY JOURNAL; RAT; T LYMPHOCYTE ACTIVATION;

AMINO ACID SEQUENCE; ANIMALS; ANTIGEN PRESENTATION; CD4-POSITIVE T-LYMPHOCYTES; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; EPITOPES; GENES, MHC CLASS I; HISTOCOMPATIBILITY ANTIGENS; HYBRIDOMAS; LIGANDS; PEPTIDE FRAGMENTS; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; RATS; RATS, INBRED LEW; RECEPTORS, ANTIGEN, T-CELL, ALPHA-BETA; SEQUENCE ANALYSIS;

EID: 0030860108     PISSN: 03604012     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-4547(19970701)49:1<107::AID-JNR12>3.0.CO;2-0     Document Type: Article

References (60)

1. Abbas AK, Lichtman AH, Pober JS (1994): "Cellular and Molecular Immunology." Philadelphia: W.B. Saunders, p 103.
2. Blankenhorn EP, Stranford SA, Smith PD, Hickey WF (1991): Genetic differences in the T cell receptor alleles of LEW rats and their encephalomyelitis-resistant derivative, LER, and their impact on the inheritance of EAE resistance. Eur J Immunol 21:2033-2041.
3. Broeren CP, Lucassen MA, van Stipdonk MJ, van der Zee R, Boog CJ, Kusters JG, van Eden W (1994): CDR1 T-cell receptor betachain peptide induces major histocompatibility complex class II-restricted T-T cell interactions. Proc Natl Acad Sci USA 91:5997-6001.
4. k peptide motif revealed by sequencing naturally processed peptides from T cell hybridoma class I molecules. J Neurosci Res 45:803-811.
5. Chou YK, Henderix P, Vainiene M, Whitham R, Bourdette D, Chou CHJ, Hashim GA, Offner H, Vandenbark AA (1991): Specificity of human T cell clones reactive to immunodominant epitopes of myelin basic protein. J Neurosci Res 28:280-290.
6. Cohen JJ, Duke RC, Fadok VA, Sellins KS (1992): Apoptosis and programmed cell death in immunity. Annu Rev Immunol 10:267-293.
7. Cortese-Hassett AL, Stranick KS, Locker J, Kunz HW, Gill TJ (1986): Molecular analysis of the rat MHC. Delineation of the major regions in the MHC and in the grc. J Immunol 137:373-378.
8. Falk K, Rötzschke O, Stevanovic S, Jung G, Rammensee HG (1991): Allele-specitic motifs revealed by sequencing of self-peptides eluted from MHC molecules. Nature 351:290-296.
9. b. Science 257:919-927.
10. Fukumoto T, McMaster WR, Williams AF (1982): Mouse monoclonal antibodies against rat major histocompatibility antigens. Two Ia antigens and expression of Ia and class I antigens in rat thymus. Eur J Immunol 12:237-243.
11. Germain RN (1994): MHC-dependent antigen processing and peptide presentation: Providing ligands for T lymphocyte activation. Cell 76:287-299.
12. Germain RN, Margulies DH (1993): The biochemistry and cell biology of antigen processing and presentation. Annu Rev Immunol 11:403-150.
13. Gold DP, Offner H, Sun D, Wiley S, Vandenbark AA, Wilson DB (1991): Analysis of T cell receptor β chains in Lewis rats with experimental autoimmune encephalomyelitis: Conserved complemetarity determining region 3. J Exp Med 174:1467-1476.
14. Gray D, Skarvall H (1988): B-cell memory is short-lived in the absence of antigen. Nature 336:70-73.
15. Günther E, Wurst W, Wonigeit K, Epplen JT (1985): Analysis of the rat major histocompatability system by southern blot hybridization. J Immunol 134:1257-1261.
16. Hartley JW, Wolford NK, Old LJ, Rowe WP (1977): A new class of murine leukemia virus associated with development of spontaneous lymphomas. Proc Natl Acad Sci USA 74:789-792.
17. Hashim GA, Vandenbark AA, Galang AB, Diamanduros T, Carvalho E, Srinivasan J, Jones R, Vainiene M, Morrison WJ, Offner H (1990): Antibodies specific for VB8 receptor peptide suppress experimental autoimmune encephalomyelitis. J Immunol 144: 4621-1627.
18. Herr W (1984): Nucleotide sequence of AKV murine leukemia virus. J Virol 49:471-178.
19. Herr W, Gilbert W (1983): Somatically acquired recombinant murine leukemia proviruses in thymic leukemias of AKR/J mice. J Virol 46:70-82.
20. Herr W, Corbin V, Gilbert W (1982): Nucleotide sequence of the 3′ half of AKV. Nucleic Acids Res 10:6931-6944.
21. Howell MD, Winters ST, Olee T, Powell HC, Carlo DJ, Brostoff SW (1989): Vaccination against experimental allergic encephalomyelitis with T cell receptor peptides. Science 246:668-670.
22. Hunt DF, Henderson RA, Shabanowitz J, Sakaguchi K, Michel H, Sevilir N, Cox AL, Appella E, Engelhard VH (1992): Characterization of peptides bound to the class I MHC molecule HLA-A2.1 by mass spectrometry. Science 255:1261-1263.
23. Jameson SC, Tope WD, Tredgett EM, Windle JM, Diamond AG, Howard JC (1992): Cloning and expression of class I major histocompatibility complex genes of the rat. J Exp Med 175:1749-1757.
24. Jerne NK (1984): Idiotypic networks and other preconceived ideas. Immunol Rev 79:5-24.
25. c expresses two classical Class I molecules. J Immunol 157:1551-1558.
26. King J, Laemmli UK (1971): Polypeptides of the tail fibres of bacteriophage T4. J Mol Biol 62:465-477.
27. Kourilsky P, Chaouat G, Rabourdin-Combe C, Claverie JM (1987): Working principles in the immune system implied by the "peptide self" model. Proc Natl Acad Sci USA 84:3400-3404.
28. Kumar V, Sercarz EE (1993): The involvement of T cell receptor peptide-specific regulatory CD4+ T cells in recovery from antigen-induced autoimmune disease. J Exp Med 178:909-916.
29. Laine B, Sautiere P, Biserte G (1976): Primary structure and microheterogeneities of rat chloroleukemia histone H2A (histone ALK, Iib1 or F2a2). Biochemistry 15:1640-1645.
30. Lider O, Reshef T, Beraud E, Ben-nun A, Cohen IR (1988): Antiidiotypic network induced by T cell vaccination against experimental autoimmune encephalomyelitis. Science 239:181-183.
31. Lohse AW, Mor F, Karin N, Cohen IR (1989): Control of experimental autoimmune encephalomyelitis by T cells responding to activated T cells. Science 244:820-822.
32. Lung ML, Hartley JW, Rowe WP, Hopkins NH (1983): Large RNAse T1-resistant oligonucleotides encoding p15E and the U3 region of the long terminal repeat distinguish two biological classes of mink cell focus-forming type C viruses of inbred mice. J Virol 45:275-290.
33. Madden DR, Gorda JC, Strominger JL, Wiley DC (1991): The structure of HLA-B27 reveals nonamer self-peptides bound in an extended conformation. Nature 353:321-325.
34. Mark GE, Rapp UR (1984): Envelope gene sequence of two in vitro-generated mink cell focus-forming murine leukemia viruses which contain the entire gp70 sequence of the endogenous nonecotropic parent. J Virol 49:530-539.
35. Momburg F, Ortiz-Navarrete V, Neefjes J, Goulmy E, Vandewal Y, Spits H, Powis SJ, Butcher GW, Howard JC, Waiden P, et al. (1992): Proteasome subunits encoded by the major histocompatibility complex are not essential for antigen presentation. Nature 360:174-177.
36. Momburg F, Roelse J, Howard JC, Butcher GW, Hammerling GJ, Neefjes JJ (1994): Selectivity of MHC-encoded peptide transporters from human, mouse and rat. Nature 367:648-651.
37. Moore MW, Carbone FR, Bevan MJ (1988): Introduction of soluble protein into the class I pathway of antigen processing and presentation. Cell 54:777-785.
38. Moriyama T, Fujiwara Y, Imai E, Takenaka M, Kawanishi S, Inoue T, Noguchi T, Tanaka T, Kamada T, Ueda N (1992): cDNA cloning of rat LRP, a receptor like protein tyrosine phosphatase, and evidence for its gene regulation in cultured rat mesangial cells. Biochem Biophys Res Commun 188:34-39.
39. Morrison LA, Lukacher AE, Braciale VL, Fan DP, Braciale TJ (1986): Differences in antigen presentation to MHC class I and class II restricted influenza virus-specific cytolytic T lymphocyte clones. J Exp Med 163:903-921.
40. Nishida T, Nishino N, Takano M, Sekiguchi Y, Kawai K, Mizuno K, Nakai S, Masui Y, Hirai Y (1989): Molecular cloning and expression of rat interleukin-1 alpha cDNA. J Biochem 105:351-357.
41. O'Donnell PV, Stocken E, Obata Y, Old LJ (1981): Leukemogenic properties of AKR dualtropic (MCF) viruses: Amplification of murine leukemia virus-related antigens on thymocytes and acceleration of leukemia development in AKR mice. Virology 112:548-563.
42. Offner HA, Hashim GA, Vandenbark AA (1991): T cell receptor peptide therapy triggers autoregulation of experimental encephalomyelitis. Science 251:430-432.
43. Offner HA, Buenafe AC, Vainene M, Celnik B, Weinberg AD, Gold DP, Hashim G, Vandenbark AA (1993): Where, when, and how to detect biased expression of disease-relevant Vβ genes in rats with experimental autoimmune encephalomyelitis. J Immunol 151:506-517.
44. Parker KE, Carter CA, Fabre JW (1990): A rat class I cDNA clone with an Alu-like sequence and mapping to two genes in RT1.C/E. Immnunogenetics 31:211-214.
45. Paul WE, Seder RA (1994): Lymphocyte responses and cytokines. Cell 76:241-251.
46. Powis SJ, Townsend AR, Deverson EV, Bastin J, Butcher GW, Howard JC (1991): Restoration of antigen presentation to the mutant cell line RMA-S by an MHC-linked transporter. Nature 354:528-531.
47. Powis SJ, Deverson EV, Coadwell WJ, Ciruela A, Huskisson NS, Smith H, Butcher GW, Howard JC (1992): Effect of polymorphism of an MHC-linked transporter on the peptides assembled in a class I molecule. Nature 357:207-215.
48. Powis SJ, Young LL, Barker PJ, Richardson L, Howard JC, Butcher GW (1993): Major histocompatibility complex-encoded ABC transporters and rat class I peptide motifs. Transplant Proc 25:2752-2753.
49. Rammensee HG, Falk K, Rotzschke O (1993): Peptides naturally presented by MHC class I molecules. Annu Rev Immunol 11:213-244.
50. Remington MP, Hoffman PM, Ruscetti SK, Masuda M (1992): Complete nucleotide sequence of a neuropathogenic variant of Friend murine leukemia virus PVC-211. Nucleic Acids Res 20:3249.
51. Rotzschke O, Falk K, Wallny HJ, Faath S, Rammensee HG (1990): Characterization of naturally occurring minor histocompatibility peptides including H-4 and H-Y. Science 249:283-287.
52. Spies T, Cerundolo V, Colonna M, Cresswell P, Townsend A, DeMars R (1992): Presentation of viral antigen by MHC class I molecules is dependent on a putative peptide transporter heterodimer. Nature 355:644-646.
53. Sun D, Quin Y, Chluba J, Epplen JT, Wekerle H (1988): Suppression of experimentally induced autoimmune encephalomyelitis by cytolytic T-T cell interactions. Nature 332:843-845.
54. Thompson D, Larson G (1992): Western blots using stained protein gels. Biotechniques 12:656-658.
55. Townsend A, Ohlen C, Bastin J, Ljunggren HG, Foster L, Karre K (1989): Association of class I major histocompatability heavy and light chains induced by viral peptides. Nature 340:443-148.
56. Vainiene M, Gold DP, Celnik B, Hashim GA, Vandenbark AA, Offner H (1992): Common sequences on distinct Vβ genes defines a protective idiotope in experimental encephalomyelitis. J Neurosci Res 31:413-420.
57. Vainiene M, Celnik B, Vandenbark AA, Hashim GA, Offner H (1996): Natural immunodominant and experimental autoimmune encephalomyelitis-protective determinants within the Lewis rat Vβ8.2 sequence include CDR2 and framework 3 idiotopes. J Neurosci Res 43:137-145.
58. Vandenbark AA, Hashim GA, Offner H (1989): Immunization with a synthetic T-cell receptor V-region peptide protects against experimental autoimmune encephalomyelitis. Nature 341:541-544.
59. White J, Blackman M, Bill J, Kappler J, Marrack P, Gold DP, Born W (1989): Two better cell lines for making hybridomas expressing specific T cell receptors. J Immunol 143:1822-1825.
60. Yewdell JW, Bennink JR, Hosaka Y (1988): Cells process exogenous proteins for recognition by cytotoxic T lymphocytes. Science 239:637-640.