Detection and identification of mycobacteria by amplification of RNA and DNA in pretreated blood and bone marrow aspirates by a simple lysis method

Journal of Clinical Microbiology

Volumn 35, Issue 8, 1997, Pages 2124-2128

  Gamboa, Fredy ^a,c   Manterola, José M ^a,b   Lonca, Joan ^a   Matas, Lurdes ^a,b   Viñado, Belén ^a   Giménez, Montserrat ^a   Cardona, Pere J ^a   Padilla, Eduardo ^a   Ausina, Vicente ^a,b  

^a HOSPITAL UNIVERSITARI GERMANS TRIAS I PUJOL   (Spain)

^b UNIVERSITAT AUTÒNOMA DE BARCELONA   (Spain)

^c PONTIFICIA UNIVERSIDAD JAVERIANA   (Colombia)

Author keywords

[No Author keywords available]

Indexed keywords

ACQUIRED IMMUNE DEFICIENCY SYNDROME; ARTICLE; BACTERIAL GENE; BACTERIUM DETECTION; BONE MARROW BIOPSY; GENE AMPLIFICATION; HUMAN; HUMAN TISSUE; INFECTION RISK; MYCOBACTERIUM; NONHUMAN; PRIORITY JOURNAL;

BACTERIA (MICROORGANISMS); CORYNEBACTERINEAE; MYCOBACTERIUM AVIUM; MYCOBACTERIUM AVIUM-INTRACELLULARE; MYCOBACTERIUM GENAVENSE; MYCOBACTERIUM INTRACELLULARE; MYCOBACTERIUM KANSASII; MYCOBACTERIUM TUBERCULOSIS;

EID: 0030843657     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/jcm.35.8.2124-2128.1997     Document Type: Article

References (40)

1. Agy, M. B., C. K. Wallis, J. J. Plorde, L. C. Carlson, and M. B. Coyle. 1989. Evaluation of four mycobacterial blood culture media: BACTEC 13A, Isolator/BACTEC 12B, Isolator/Middlebrook agar, and a biphasic medium. Diagn. Microbiol. Infect. Dis. 12:303-308.
2. Benson, C. A. 1994. Mycobacterium tuberculosis and Mycobacterium avium complex disease in patients with HIV infection. Curr. Opin. Infect. Dis. 7:95-107.
3. Böddinghaus, B., T. Rogall, T. Flohr, H. Blöcker, and E. C. Böttger. 1990. Detection and identification of mycobacteria by amplification of rRNA. J. Clin. Microbiol. 28:1751-1759.
4. Brisson-Noël, A., C. Aznar, C. Chureau, S. Nguyen, C. Pierre, M. Bartoli, R. Bonete, G. Pialoux, B. Gicquel, and G. Garrigue. 1991. Diagnosis of tuberculosis by amplification of mycobacterial DNA in clinical practical evaluation. Lancet 338:364-366.
5. Chain, K. 1995. Clinical microscopy, p. 33-51. In P. R. Murray, E. J. Baron, M. A. Pfaller, F. C. Tenover, and R. H. Yolken (ed.), Manual of clinical microbiology, 6th ed. American Society for Microbiology, Washington, D.C.
6. Clarridge, J. E., III, R. M. Shawar, T. M. Shinnick, and B. B. Plikaytis. 1993. Large-scale use of polymerase chain reaction for detection of Mycobacterium tuberculosis in a routine mycobacteriology laboratory. J. Clin. Microbiol. 31:2049-2056.
7. Coletsos, P. J. 1960. Milieu et modalités de culture adaptés à la réanimation et à la multiplication in vitro de Mycobacterium tuberculosis de vitalité réduite de viabilité éphémère ou en état de quiescence. Ann. Inst. Pasteur 99:475-495.
8. Del Portillo, P., L. A. Murillo, and M. E. Patarroyo. 1991. Amplification of a species-specific DNA fragment of Mycobacterium tuberculosis and its possible use in diagnosis. J. Clin. Microbiol. 29:2163-2168.
9. Doern, G. V., and J. A. Westerling. 1994. Optimum recovery of Mycobacterium avium complex from blood specimens of human immunodeficiency virus-positive patients by using small volumes of Isolator concentrate inoculated into BACTEC 12B bottles. J. Clin. Microbiol. 32:2576-2577.
10. Ellner, J. J., M. J. Goldberger, and D. M. Parenti. 1991. Mycobacterium avium infection and AIDS: a therapeutic dilemma in rapid evolution. J. Infect. Dis. 163:1326-13.15.
11. Ephraim, D. A., and E. D. Spitzer. 1994. Use of acridinium-ester-labeled DNA probes for identification of mycohacteria in BACTEC 13A blood cultures. Diagn. Microbiol. Infect. Dis. 18:137-139.
12. Evans, K. D., A. S. Nakasone, P. A. Sutherland, L. M. de la Maza, and E. M. Peterson. 1992. Identification of Mycobacterium tuberculosis and Mycobacterium avium-M. intracellulare directly from primary BACTEC cultures by using acridinium-ester-labeled DNA probes. J. Clin. Microbiol. 30:2427-2431.
13. Folgueira, L., R. Delgado, E. Palenque, J. M. Aguado, and A. R. Noriega. 1996. Rapid diagnosis of Mycobacterium tuberculosis bacteremia by PCR. J. Clin. Microbiol. 31:1019-1021.
14. Fries, J. W. U., R. J. Patel, W. F. Piessens, and D. F. Wirth. Genus-and species-specific DNA probes to identify mycobacteria using the polymerase chain reaction. Mol. Cell. Probe 4:87-105.
15. Gamboa, F., J. M. Manterola, B. Viñado, L. Matas, M. Giménez, J. Lonca, J. R. Manzano, C. Rodrigo, P. J. Cardona, E. Padilla, J. Dominguez, and V. Ausina. 1997. Direct detection of Mycobacterium tuberculosis complex in nonrespiratory specimens by Gen-Probe Amplified Mycobacterium Tuberculosis Direct Test. J. Clin. Microbiol. 35:307-310.
16. Gill, V. G., C. H. Park, F. Stock, L. L. Gosey, F. G. Witebsky, and H. Masur. 1985. Use of lysis-centrifugation (Isolator) and radiometric (BACTEC) blood culture system for the detection of mycobacteremia. J. Clin. Microbiol. 22:543-546.
17. Goto, M., S. Oka, K. Okuzumi, S. Kimura, and K. Shimada. 1991. Evaluation of acridinium-ester-labeled DNA probes for identification of Mycobacterium tuberculosis and Mycobacterium avium-Mycobacterium intracellulare complex in culture. J. Clin. Microbiol. 29:2473-2476.
18. Hance, A. J., B. Grandchamp, V. Levy-Frebault, D. Lecossier, J. Rauzier, D. Bocart, and B. Gicquel. 1989. Detection and identification of mycobacteria by amplification of mycobacterial DNA. Mol. Microbiol. 3:843-849.
19. Hanna, B. A., S. B. Walters, S. J. Bonk, and J. T. Leo. 1995. Recovery of mycobacteria from blood in Mycobacteria Growth Indicator Tube and Lowenstein-Jensen slant after lysis-centrifugation. J. Clin. Microbiol. 33:3315-3316.
20. Heifets, L. B., and R. C. Good. 1994. Current laboratory methods for the diagnosis of tuberculosis, p. 85-110. In B. R. Bloom (ed.), Tuberculosis: pathogenesis, protection and control. American Society for Microbiology, Washington, D.C.
21. Hoop, R. K., E. C. Böttger, P. Ossent, and M. Salfinger. 1993. Mycobacteriosis due to "Mycobacterium genavense" in six pet birds. J. Clin. Microbiol. 31:990-993.
22. Horsburgh, C. R., Jr. 1991. Mycobacterium avium complex infection in the acquired immunodeficiency syndrome. N. Engl. J. Med. 324:1332-1338.
23. Hoy, J., A. Mijch, M. Sandland, L. Grayson, R. Lucas, and B. Dwyer. 1990. Quadruple-drug therapy for Mycobacterium avium-intracellulare bacteremia in AIDS. J. Infect. Dis. 161:801-805.
24. Kent, P. T., and G. P. Kubica. 1985. Public health mycobacteriology: a guide for the level III laboratory. Centers for Disease Control, U.S. Department of Public Health and Human Services, Atlanta, Ga.
25. Kox, L. F. F., D. Rhienthong, A. Medo Miranda, N. Udomsantisuk, K. Ellis, J. van Leeuwen, S. van Heusden, S. Kuijper, and A. H. J. Kolk. 1994. A more reliable PCR lor detection of Mycobacterium tuberculosis in clinical samples. J. Clin. Microbiol. 32:672-678.
26. Kulski, J. K., C. Khinsoe, T. Pryce, and K. Christiansen. 1995. Use of a multiplex PCR to detect and identify Mycobacterium avium and M. intracellulare in blood culture fluids of AIDS patients. J. Clin. Microbiol. 33:668-674.
27. Kulski, J. K., and T. Pryce. 1996. Preparation of mycobacterial DNA from blood culture fluids by simple alkali wash and heat lysis method for PCR detection. J. Clin. Microbiol. 34:1985-1991.
28. Luquin, M., V. Ausina, F. López-Calahorra, F. Belda, M. García-Barceló, C. Celma, and G. Prats. 1991. Evaluation of practical chromatographic procedures for identification of clinical isolates of mycobacteria. J. Clin. Microbiol. 29:120-130.
29. Manterola, J. M., F. Gamboa, J. Lonca, L. Matas, J. Ruiz Manzano, C. Rodrigo, and V. Ausina. 1995. Inhibitory effect of sodium dodecyl sulfate in detection of Mycobacterium tuberculosis by amplification of rRNA. J. Clin. Microbiol. 33:3338-3340.
30. Masur, H., and the Public Health Task Force on Prophylaxis and Therapy for Mvcobacterium avium Complex. 1993. Special report. Recommendations on prophylaxis and therapy for disseminated Mycobacterium avium complex disease in patients infected with the human immunodeficiency virus. N. Engl. J. Med. 329:898-905.
31. Nightingale, S. D., L. T. Byrd, P. M. Southern, J. D. Jockusch, S. X. Cal, and B. A. Wynne. 1992. Incidence of Mycobacterium avium-intracellulare complex bacteremia in human immunodeficiency virus-positive patients. J. Infect. Dis. 165:1082-1085.
32. Noordhoek, G. T., A. H. J. Kolk, G. Bjune, D. Catty, J. W. Dale, P. E. M. Fine, P. Godfrey-Faussett, S.-N. Cho, T. Shinnick, S. B. Svenson, S. Wilson, and J. D. A. van Embden. 1994. Sensitivity and specificity of PCR for detection of Mycobacterium tuberculosis: a blind comparison study among seven laboratories. J. Clin. Microbiol. 32:277-284.
33. Pfyffer, G. E., P. Kissling, R. Wirth, and R. Weber. 1994. Direct detection of Mycobacterium tuberculosis complex in respiratory specimens by a target-amplified test system. J. Clin. Microbiol. 32:918-923.
34. Pfyffer, G. E., P. Kissling, E. M. I. Jahn, H.-M. Welscher, M. Salfinger, and R. Weber. 1996. Diagnostic performance of Amplified Mycobacterium tuberculosis Direct Test with cerehrospinal fluid, other nonrespiratory, and respiratory specimens. J. Clin. Microbiol. 34:834-841.
35. Salfinger, M., and F. M. Kafader. 1987. Comparison of two pretreatment methods for the detection of mycobacteria of BACTEC and Löwenstein-Jensen slants. J. Microbiol. Methods 6:315-321.
36. Salfinger, M., E. W. Stool, D. Piot, and L. Heifets. 1988. Comparison of three methods for recovery of Mycobacterium avium complex from blood specimens. J. Clin. Microbiol. 26:1225-1226.
37. Small, P. M., R. W. Shafter, P. C. Hopewell, S. P. Singh, M. J. Murphy, E. Desmond, M. F. Sierra, and G. K. Schoolnik. 1993. Exogenous reinfection with multidrug-resistant Mycobacterium tuberculosis in patients with advanced HIV infection. N. Engl. J. Med. 328:1137-1144.
38. Tison, F., and B. Carbonnelle. 1972. Culture des mycobactéries. p. 89-130. In F. Tison and B. Carbonnelle (ed.), Recherche, isolement et étude du bacille tuberculeux et des autres mycobactéries en practique courante. Editions Crouan & Roques, Paris, France.
39. Wasilauskas, B., and R. Morrell, Jr. 1994. Inhibitory effect of the Isolator blood culture system on growth of Mycobacterium avium-M. intracellulare in BACTEC 12B bottles. J. Clin. Microbiol. 32:654-657.
40. Wilton, S., and D. Cousins. 1992. Detection and identification of multiple mycobacterial pathogens by DNA amplification in a single tube. PCR Methods Applicat. 1:269-273.