Multiplex systems for the amplification of short tandem repeat loci: Evaluation of laser fluorescence detection

BioTechniques

Volumn 23, Issue 4, 1997, Pages 742-747

  Ricciardone, Marie D ^a,b   Lins, Ann M ^c   Schumm, James W ^c   Holland, Mitchell M ^a  

^a ARMED FORCES INSTITUTE OF PATHOLOGY   (United States)

^b BILKENT UNIVERSITY   (Turkey)

^c PROMEGA CORPORATION   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DNA SEQUENCE; FLUORESCENCE; GEL ELECTROPHORESIS; GENE AMPLIFICATION; GENE MAPPING; GENETIC ANALYSIS; IMAGE ANALYSIS; PROTEIN DENATURATION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; TANDEM REPEAT;

ALLELES; DNA; ELECTROPHORESIS, POLYACRYLAMIDE GEL; FLUORESCENT DYES; FLUOROMETRY; LASERS; POLYMERASE CHAIN REACTION; QUALITY CONTROL; REPETITIVE SEQUENCES, NUCLEIC ACID; SENSITIVITY AND SPECIFICITY; SEQUENCE ANALYSIS, DNA;

EID: 0030826458     PISSN: 07366205     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (25)

1. Alford, R.L., H.A. Hammond, I. Coto and C.T. Caskey. 1994. Rapid and efficient resolution of parentage by amplification of short tandem repeats. Am. J. Hum. Genet. 55:190-195.
2. Beckman, J.S. and J.L. Weber. 1992. Survey of human and rat microsatellites. Genomics 12:627-631.
3. Clayton, T.M., D.L. Fisher, M.M. Holland, D.A. Lee, C.N. Maguire, V.W. Weedn, J.P. Whitaker and P. Gill. 1995. Further validation of the Quad 1 STR DNA typing system: a collaborative effort to identify victims of a mass disaster. Forensic Sci. Int. 76:17-25.
4. Edwards, A., A. Civitello, H.A. Hammond and C.T. Caskey. 1991. DNA typing and genetic mapping with trimeric and tetrameric tandem repeats. Am. J. Hum. Genet. 49:746-756.
5. Edwards, A., H.A. Hammond, L. Jin, C.T. Caskey and R. Chakraborty. 1992. Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups. Genomics 12:241-253.
6. Frégeau, C.J. and R.M. Fourney. 1993. DNA typing with fluorescently tagged short tandem repeats: a sensitive and accurate approach to human identification. BioTechniques 15:100-119.
7. Gill, P., P.L. Ivanov, C. Kimpton, R. Piercy, N. Benson, G. Tully, I. Evett, E. Hagelberg and K. Sullivan. 1994. Identification of the remains of the Romanov family by DNA analysis. Nat. Genet. 6:130-135.
8. Hammond, H.A., L. Jin, Y. Zhong, C.T. Caskey and R. Chakraborty. 1994. Evaluation of 13 short tandem repeat loci for use in personal identification applications. Am. J. Hum. Genet. 55:175-189.
9. Holland, M.M., D.L. Fisher, R.K. Roby, J. Ruderman, C. Bryson and V.W. Weedn. 1995. Mitochondrial DNA sequence analysis of human remains. Crime Lab. Dig. 22:109-115.
10. Kimpton, C.P., P. Gill, A. Walton, A. Urquhart, E.S. Millican and M. Adams. 1993. Automated DNA profiling employing multiplex amplification of short tandem repeat loci. PCR Methods Appl. 3:13-22.
11. Kurosaki, K., T. Matsushita and S. Ueda. 1993. Individual DNA identification from ancient human remains. Am. J. Hum. Genet. 53:638-643.
12. Lins, A.M., C.J. Sprecher, C. Puers and J.W. Schumm. 1996. Multiplex sets for the amplification of polymorphic short tandem repeat loci -silver stain and fluorescent detection. BioTechniques 20:882-889.
13. Mayrand, P.E., K.P. Corcoran, J.S. Ziegle, J.M. Robertson, L.B. Hoff and M.N. Kronick. 1992. The use of fluorescence detection and internal lane standards to size PCR products automatically. Appl. Theor. Electrophor. 3:1-11.
14. Murray, J.C., K.H. Buetow, J.L. Weber, S. Ludwigsen, T. Scherpbier-Heddema, F. Manion, J. Quillen, V.C. Sheffield et al. 1994. A comprehensive human linkage map with centimorgan density. Science 265:2049-2054.
15. Parsons, T.J. and V.W. Weedn. 1997. Preservation and recovery of DNA in postmortem specimens and trace evidence, p. 109-138. In W. Hagland and M. Sorg (Eds.), Forensic Taphonomy: The Postmortem Fate of Human Remains, CRC Press. Boca Raton.
16. Polymeropoulos, M.H., D.S. Rath, H. Xiao and C.R. Merril. 1991. Tetranucleotide repeat polymorphism at the human c-fes/fps proto-oncogene (FES). Nucleic Acids Res. 19:4018.
17. Polymeropoulos, M.H., D.S. Rath, H. Xiao and C.R. Merril. 1991. Tetranucleotide repeat polymorphism at the human coagulation factor XIII A subunit gene (F13A1). Nucleic Acids Res. 19:4306.
18. Polymeropoulos, M.H., H. Xiao, D.S. Rath and C.R. Merril. 1991. Tetranucleotide repeat polymorphism at the human tyrosine hydroxylase gene (TH). Nucleic Acids Res. 19:3753.
19. n and reassignment of alleles in population analysis by using a locus-specific allelic ladder. Am. J. Hum. Genet. 53:953-958.
20. Schumm, J.W., A.M. Lins, K.A. Micka, C.J. Sprecher, D.R. Rabbach and J. Bacher. 1997. Automated fluorescent detection of STR multiplexes: Development of the GenePrint™ PowerPlex™ and FFFL multiplexes for forensic and paternity applications, p. 90-104. Proceedings from the First European Symposium on Human Identification, 1996. Promega Corporation, Madison, WI.
21. Sprecher, C.J., C. Puers, A.M. Lins and J.W. Schumm. 1996. A general approach to analysis of polymorphic short tandem repeat loci. BioTechniques 20:266-276.
22. Sullivan, K.M., S. Pope, P. Gill and J.M. Robertson. 1992. Automated DNA profiling by fluorescent labeling of PCR products. PCR Methods Appli. 2:34-40.
23. Urquhart, A., N.J. Oldroyd, C.P. Kimpton and P. Gill. 1995. Highly discriminating heptaplex short tandem repeat PCR system for forensic identification. BioTechniques 18:116-121.
24. Weber, J.L. and P.E. May. 1989. Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. Am. J. Hum. Genet. 44:388-396.
25. Ziegle, J.S., Y. Su, K.P. Corcoran, L. Nie, P.E. Mayrand, L.B. Hoff, L.J. McBride, M.N. Kronick and S.R. Diehl. 1992. Application of automated DNA sizing technology for genotyping microsatellite loci. Genomics 14:1026-1031.