메뉴 건너뛰기




Volumn 71, Issue 11, 1997, Pages 8340-8346

Evolutionary dynamics of genetic variation in Epstein-Barr virus isolates of diverse geographical origins: Evidence for immune pressure- independent genetic drift

Author keywords

[No Author keywords available]

Indexed keywords

ANTIGEN RECOGNITION; ARTICLE; CYTOTOXIC T LYMPHOCYTE; EPSTEIN BARR VIRUS; EVOLUTION; GENE SEQUENCE; GENETIC DRIFT; GENETIC VARIABILITY; IMMUNE RESPONSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; VIRUS GENE;

EID: 0030798483     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.71.11.8340-8346.1997     Document Type: Article
Times cited : (52)

References (31)
  • 1
    • 0030009308 scopus 로고    scopus 로고
    • Unusually high frequency of Epstein-Barr virus genetic variants in Papua New Guinea that can escape cytotoxic T-cell recognition: Implications for virus evolution
    • Burrows, J. M., S. R. Burrows, L. M. Poulsen, T. B. Sculley, D. J. Moss, and R. Khanna. 1996. Unusually high frequency of Epstein-Barr virus genetic variants in Papua New Guinea that can escape cytotoxic T-cell recognition: implications for virus evolution. J. Virol. 70:2490-2496.
    • (1996) J. Virol. , vol.70 , pp. 2490-2496
    • Burrows, J.M.1    Burrows, S.R.2    Poulsen, L.M.3    Sculley, T.B.4    Moss, D.J.5    Khanna, R.6
  • 2
    • 0028123067 scopus 로고
    • Impaired cytotoxic T lymphocyte recognition due to genetic variations in the main immunogenic region of the human immunodeficiency virus 1 NEF protein
    • Couillin, I., B. Culmann-Penciolelli, E. Gomard, J. Choppin, J. P. Levy, J. G. Guillet, and S. Saragosti. 1994. Impaired cytotoxic T lymphocyte recognition due to genetic variations in the main immunogenic region of the human immunodeficiency virus 1 NEF protein. J. Exp. Med. 180:1129-1134.
    • (1994) J. Exp. Med. , vol.180 , pp. 1129-1134
    • Couillin, I.1    Culmann-Penciolelli, B.2    Gomard, E.3    Choppin, J.4    Levy, J.P.5    Guillet, J.G.6    Saragosti, S.7
  • 3
    • 0021678547 scopus 로고
    • Group selection for a polygenic behavioral trait: Estimating the degree of population subdivision
    • Crow, J. F., and K. Aoki. 1984. Group selection for a polygenic behavioral trait: estimating the degree of population subdivision. Proc. Natl. Acad. Sci. USA 81:6073-6077.
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 6073-6077
    • Crow, J.F.1    Aoki, K.2
  • 5
    • 0028218246 scopus 로고
    • T-cell responses and virus evolution: Loss of HLA A11-restricted CTL epitopes in Epstein-Barr virus isolates from highly A11-positive populations by selective mutation of anchor residues
    • de Campos-Lima, P. O., V. Levitsky, J. Brooks, S. P. Lee, L. F. Hu, A. B. Rickinson, and M. G. Masucci. 1994. T-cell responses and virus evolution: loss of HLA A11-restricted CTL epitopes in Epstein-Barr virus isolates from highly A11-positive populations by selective mutation of anchor residues. J. Exp. Med. 179:1297-1305.
    • (1994) J. Exp. Med. , vol.179 , pp. 1297-1305
    • De Campos-Lima, P.O.1    Levitsky, V.2    Brooks, J.3    Lee, S.P.4    Hu, L.F.5    Rickinson, A.B.6    Masucci, M.G.7
  • 6
    • 0001452264 scopus 로고
    • Immunity to viruses
    • Doherty, P. 1495. Immunity to viruses. The Immunologist 5/6:231-233.
    • (1495) The Immunologist , vol.5-6 , pp. 231-233
    • Doherty, P.1
  • 8
    • 0028971196 scopus 로고
    • 5′ coding and regulatory region sequence divergence with conserved function of the Epstein-Barr virus LMP2A homolog in herpesvirus papio
    • Franken, M., B. Annis, A. N. Ali, and F. Wang. 1945. 5′ coding and regulatory region sequence divergence with conserved function of the Epstein-Barr virus LMP2A homolog in herpesvirus papio. J. Virol. 6918011-8019.
    • (1945) J. Virol. , vol.69 , pp. 8011-8019
    • Franken, M.1    Annis, B.2    Ali, A.N.3    Wang, F.4
  • 9
    • 0027453041 scopus 로고
    • Statistical tests of neutrality of mutations
    • Fu, Y. X., and W. H. Li. 1993. Statistical tests of neutrality of mutations. Genetics 133:693-704.
    • (1993) Genetics , vol.133 , pp. 693-704
    • Fu, Y.X.1    Li, W.H.2
  • 10
    • 0026709389 scopus 로고
    • Estimation of levels of gene flow from DNA sequence data
    • Hudson, R. R., M. Slatkin, and W. P. Maddison. 1992. Estimation of levels of gene flow from DNA sequence data. Genetics 132:583-584.
    • (1992) Genetics , vol.132 , pp. 583-584
    • Hudson, R.R.1    Slatkin, M.2    Maddison, W.P.3
  • 11
    • 0023764283 scopus 로고
    • Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection
    • Hughes, A. L., and M. Nei. 1988. Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection. Nature 335:167-170.
    • (1988) Nature , vol.335 , pp. 167-170
    • Hughes, A.L.1    Nei, M.2
  • 12
    • 0026681729 scopus 로고
    • Localization of Epstein-Barr virus cytotoxic T-cell epitopes using recombinant vaccinia: Implications for vaccine development
    • Khanna, R., S. R. Burrows, M. G. Kurilla, C. A. Jacob, I. S. Misko, T. B. Sculley, E. Kieff, and D. J. Moss. 1992. Localization of Epstein-Barr virus cytotoxic T-cell epitopes using recombinant vaccinia: implications for vaccine development. J. Exp. Med. 176:169-176.
    • (1992) J. Exp. Med. , vol.176 , pp. 169-176
    • Khanna, R.1    Burrows, S.R.2    Kurilla, M.G.3    Jacob, C.A.4    Misko, I.S.5    Sculley, T.B.6    Kieff, E.7    Moss, D.J.8
  • 13
    • 0029095056 scopus 로고
    • Immune regulation in Epstein-Barr virus-associated diseases
    • Khanna, R., S. R. Burrows, and D. J. Moss. 1995. Immune regulation in Epstein-Barr virus-associated diseases. Microbiol. Rev. 59:387-405.
    • (1995) Microbiol. Rev. , vol.59 , pp. 387-405
    • Khanna, R.1    Burrows, S.R.2    Moss, D.J.3
  • 14
    • 0025931944 scopus 로고
    • Expression of Epstein-Barr virus nuclear antigens in anti-IgM-stimulated B cells following recombinant vaccinia infection and their recognition by human cytotoxic T-cells
    • Khanna, R., C. A. Jacob, S. R. Burrows, M. G. Kurilla, E. Kieff, I. S. Misko, and D. J. Moss. 1991. Expression of Epstein-Barr virus nuclear antigens in anti-IgM-stimulated B cells following recombinant vaccinia infection and their recognition by human cytotoxic T-cells. Immunology 74:504-510.
    • (1991) Immunology , vol.74 , pp. 504-510
    • Khanna, R.1    Jacob, C.A.2    Burrows, S.R.3    Kurilla, M.G.4    Kieff, E.5    Misko, I.S.6    Moss, D.J.7
  • 15
    • 0027304232 scopus 로고
    • Presentation of endogenous viral peptide epitopes by anti-CD40 stimulated human B cells fallowing recombinant vaccinia infection
    • Khanna, R., C. A. Jacob, S. R. Burrows, and D. J. Moss. 1993. Presentation of endogenous viral peptide epitopes by anti-CD40 stimulated human B cells fallowing recombinant vaccinia infection. J. Immunol. Methods 164:41-49.
    • (1993) J. Immunol. Methods , vol.164 , pp. 41-49
    • Khanna, R.1    Jacob, C.A.2    Burrows, S.R.3    Moss, D.J.4
  • 16
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 19
    • 0028908939 scopus 로고
    • Epstein-Barr virus isolates with the major HLA B35.01-restricted cytotoxic T lymphocyte epitope are prevalent in a highly B35.01-positive African population
    • Lee, S. P., S. Morgan, J. Skinner, W. A. Thomas, S. R. Jones, J. Sutton, R. Khanna, H. C. Whittle, and A. B. Rickinson. 1995. Epstein-Barr virus isolates with the major HLA B35.01-restricted cytotoxic T lymphocyte epitope are prevalent in a highly B35.01-positive African population. Eur. J. Immunol. 25:102-110.
    • (1995) Eur. J. Immunol. , vol.25 , pp. 102-110
    • Lee, S.P.1    Morgan, S.2    Skinner, J.3    Thomas, W.A.4    Jones, S.R.5    Sutton, J.6    Khanna, R.7    Whittle, H.C.8    Rickinson, A.B.9
  • 20
    • 0026828398 scopus 로고
    • REAP: An integrated environment for the manipulation and phylogenic analysis of restriction data
    • McElroy, D., P. Moran, E. Bermingham, and I. Kornfield. 1992. REAP: an integrated environment for the manipulation and phylogenic analysis of restriction data. J. Hered. 83:157-158.
    • (1992) J. Hered. , vol.83 , pp. 157-158
    • McElroy, D.1    Moran, P.2    Bermingham, E.3    Kornfield, I.4
  • 21
    • 0023928773 scopus 로고
    • Cytotoxic T-cell clones discriminate between A- And B-type Epstein-Barr virus transformants
    • Moss, D. J., I. S. Misko, S. R. Burrows, K. Burman, R. McCarthy, and T. B. Sculley. 1988. Cytotoxic T-cell clones discriminate between A-and B-type Epstein-Barr virus transformants. Nature 331:719-721.
    • (1988) Nature , vol.331 , pp. 719-721
    • Moss, D.J.1    Misko, I.S.2    Burrows, S.R.3    Burman, K.4    McCarthy, R.5    Sculley, T.B.6
  • 23
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei, M., and T. Gojobori. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 3:418-426.
    • (1986) Mol. Biol. Evol. , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 25
    • 0024992268 scopus 로고
    • Viral escape by selection of cytotoxic T-cell-resistant virus variants in vivo
    • Pircher, H., D. Moskophidis, U. Rohrer, K. Bürki, and H. Hengartner. 1990. Viral escape by selection of cytotoxic T-cell-resistant virus variants in vivo. Nature 346:629-633.
    • (1990) Nature , vol.346 , pp. 629-633
    • Pircher, H.1    Moskophidis, D.2    Rohrer, U.3    Bürki, K.4    Hengartner, H.5
  • 26
    • 0017737483 scopus 로고
    • Comparative studies on adult donor lymphocytes infected by EB virus in vivo or in vitro: Origin of transformed cells arising in co-cultures with foetal lymphocytes
    • Rickinson, A. B., S. Finerty, and M. A. Epstein. 1977. Comparative studies on adult donor lymphocytes infected by EB virus in vivo or in vitro: origin of transformed cells arising in co-cultures with foetal lymphocytes. Int. J. Cancer 19:775-782.
    • (1977) Int. J. Cancer , vol.19 , pp. 775-782
    • Rickinson, A.B.1    Finerty, S.2    Epstein, M.A.3
  • 27
    • 0021325847 scopus 로고
    • Biological activity of recombinant human interleukin-2 produced in Escherichia coli
    • Rosenberg, S. A., E. A. Grimm, M. McGrogan, M. Doyle, E. Kawasaki, K. Koths, and D. F. Mark. 1984. Biological activity of recombinant human interleukin-2 produced in Escherichia coli. Science 223:1412-1414.
    • (1984) Science , vol.223 , pp. 1412-1414
    • Rosenberg, S.A.1    Grimm, E.A.2    McGrogan, M.3    Doyle, M.4    Kawasaki, E.5    Koths, K.6    Mark, D.F.7
  • 28
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 29
    • 0025255258 scopus 로고
    • Transcription of the Epstein-Barr virus genome during latency in growth-transformed lymphocytes
    • Sample, J., and E. Kieff. 1990. Transcription of the Epstein-Barr virus genome during latency in growth-transformed lymphocytes. J. Virol. 64:1667-1674.
    • (1990) J. Virol. , vol.64 , pp. 1667-1674
    • Sample, J.1    Kieff, E.2
  • 30
    • 0023683973 scopus 로고
    • Epstein-Barr virus nuclear antigens 1 and 2 in Burkitt lymphoma cell lines containing either 'A'- Or 'B'-type virus
    • Sculley, T. B., D. G. Sculley, J. H. Pope, G. W. Bornkamm, G. M. Lenoir, and A. B. Rickinson. 1988. Epstein-Barr virus nuclear antigens 1 and 2 in Burkitt lymphoma cell lines containing either 'A'-or 'B'-type virus. Intervirolouy 29:77-85.
    • (1988) Intervirolouy , vol.29 , pp. 77-85
    • Sculley, T.B.1    Sculley, D.G.2    Pope, J.H.3    Bornkamm, G.W.4    Lenoir, G.M.5    Rickinson, A.B.6
  • 31
    • 0001771498 scopus 로고
    • Evolution in mendelian populations
    • Wright, S. 1931. Evolution in mendelian populations. Genetics 16:97-159.
    • (1931) Genetics , vol.16 , pp. 97-159
    • Wright, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.