Validation studies of the CTT STR multiplex system

Journal of Forensic Sciences

Volumn 42, Issue 4, 1997, Pages 701-707

  Budowle, Bruce ^a,b   Moretti, Tamyra R ^a   Keys, Kathleen M ^a   Koons, Barbara W ^a   Smerick, Jill B ^a  

^a FBI LABORATORY   (United States)

^b Federal Bureau of Investigation   (United States)

Author keywords

CSF1PO; DNA typing; Forensic science; Genetic markers; Multiplex amplification; Polymerase chain reaction; Short tandem repeat loci; THO1; TPOX; Validation studies

Indexed keywords

DNA;

ARTICLE; BLOOD; BODY FLUID; CONTAMINATION; CONTROLLED STUDY; DNA DETERMINATION; FEMALE; FORENSIC IDENTIFICATION; GENE AMPLIFICATION; GENE LOCUS; HUMAN; MAJOR CLINICAL STUDY; MALE; NUCLEOTIDE REPEAT; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RELIABILITY; SALIVA; SEXUAL CRIME; SPERM; STORAGE; SUNLIGHT; TANDEM REPEAT; VALIDATION PROCESS;

EID: 0030793491     PISSN: 00221198     EISSN: None     Source Type: Journal    
DOI: 10.1520/jfs14187j     Document Type: Article

References (22)

1. Edwards A, Civitello A, Hammond HA, Caskey CT. DNA typing and genetic mapping with trimeric and tetrameric tandem repeats. Am J Hum Genet 1991;49:746-56.
2. Edwards A, Hammond HA, Jin L, Caskey CT, Chakraborty R. Genetic variation at five trimeric and tetrameric repeat loci in four human population groups. Genomics 1992;12:241-53.
3. Saiki RK, Scharf S, Faloona T, Mullis KB, Horn GT, Erlich HA, et al. Enzymatic amplification of beta-globin genomic sequences and restriction analysis for diagnosis of sickle cell anemia. Science 1985;230:1350-4.
4. Urquhart A, Oldroyd NJ, Kimpton CP, Gill P. Highly discriminating heptaplex short tandem repeat PCR system for forensic identification. BioTechniques 1995;18:116-21.
5. Lins AM, Sprecher CJ, Puers C, Schumm JW. Multiplex sets for the amplification of polymorphic short tandem repeat loci-silver stain and fluorescent detection. BioTechniques 1996;20:882-9.
6. Polymeropoulos MH, Xiao H, Rath DS, Merril CR. Tetranucleotide repeat polymorphism at the human tyrosine hydrolase gene (TH). Nucleic Acids Res 1991;19:3753.
7. Anker R, Steinbreuck T, Donnis-Keller H. Tetranucleotide repeat polymorphism at the human thyroid peroxidase (hTPO) locus. Hum Mol Genet 1992;1:137.
8. Hammond HA, Jin L, Zhong Y, Caskey CT, Chakraborty R. Evaluation of 13 short tandem repeat loci for use in personal identification applications. Am J Hum Genet 1994;55:175-89.
9. Baechtel FS, Presley KW, Smerick JB. D1S80 typing of DNA from simulated forensic specimens. J Forensic Sci 1995;40:536-45.
10. Budowle B, Lindsey JA, DeCou JA, Koons BW, Giusti AM, Comey CT. Validation and population studies of the Loci LDLR, GYPA, HBGG, D7S8, and Gc (PM loci), and HLA-DQa using a multiplex amplification and typing procedure. J Forensic Sci 1995;40:45-54.
11. Comey CT, Budowle B. Validation studies on the analysis of the HLA-DQ alpha locus using the polymerase chain reaction. J Forensic Sci 1991;36:1633-48.
12. Comey CT, Koons BW, Presley KW, Smerick JB, Sobieralski CA, Stanley DM, et al. DNA extraction strategies for amplified fragment length polymorphism analysis. J Forensic Sci 1994;39:1254-69.
13. Waye JS, Presley L, Budowle B, Shutler GG, Fourney RM. A simple method for quantifying human genomic DNA in forensic specimen extracts. Biotechniques 1989;7:852-5.
14. Budowle B, Baechtel FS, Comey CT, Giusti AM, Klevan L. Simple protocols for typing forensic biological evidence: Chemiluminescent detection for human DNA quantitation and RFLP analyses and manual typing of PCR amplified polymorphisms. Electrophoresis 1995;16:1559-67.
15. Huang NE, Schumm J, Budowle B. Chinese population data on three tetrameric short tandem repeat loci - HUMTHO1, TPOX, and CSF2PO - derived using multiplex PCR and manual typing. Forensic Sci Int 1995;71:131-6.
16. Hochmeister MN, Budowle B, Borer UV, Eggmann UT, Comey CT, Dirnhofer R. Typing of DNA extracted from compact bone tissue from human remains. J Forensic Sci 1991;36:1649-61.
17. Budowle B, Chakraborty R, Giusti AM, Eisenberg AJ, Allen RC. Analysis of the variable number of tandem repeats locus D1S80 by the polymerase chain reaction followed by high resolution polyacrylamide gel electrophoresis. Am J Hum Genet 1991;48:137-44.
18. Hochmeister MN, Budowle B, Schumm JW, Sprecher CJ, Borer UV, Dirnhofer R. Swiss population data and forensic efficiency values on 3 tetrameric short tandem repeat loci-HUMTHO1, TPOX, and CSF1PO - derived using a STR multiplex system. Int J Leg Med 1995;107:246-9.
19. Hauge XY, Litt M. A study of the origin of 'shadow bands' seen when typing dinucleotide repeat polymorphisms by the PCR. Hum Mol Genet 1993;2:411-5.
20. Saiki RK, Walsh S, Levenson CH, Erlich HA. Genetic analysis of amplified DNA with immobilized sequence-specific oligonucleotide probes. Proc Nat Acad Sci USA, 1989;86:6230-4.
21. Riley GR, Johnston T, Aulinskas T, Coleman BS. Testing species specificity of CTT and D1S80. Paper presented at annual meeting, American Academy of Forensic Sciences, Nashville, TN, 1996.
22. Grouse CA, Schumm J. Investigation of species specificity using nine PCR-based human STR systems. J Forensic Sci 1996; 40:952-6.