Serologic and phylogenetic characterization of HIV-1 subtypes in Uganda

AIDS

Volumn 11, Issue 15, 1997, Pages 1823-1832

  Brennan, Catherine A ^a   Lund, Jennifer K ^a   Golden, Alan ^a   Yamaguchi, Julie ^a   Vallari, Ana S ^a   Phillips, Jack F ^a   Kataaha, Peter K ^b   Jackson, J Brooks ^c   Devare, Sushil G ^a  

^a ABBOTT LABORATORIES   (United States)

^b Department of Molecular Genetics   (Uganda)

^c DEPARTMENT OF PATHOLOGY   (United States)

Author keywords

env; gag; Genetic subtype; HIV 1; Immunoassay detection; Phylogenetic analysis; Uganda

Indexed keywords

ANTIGEN P24; GLYCOPROTEIN GP 41;

ARTICLE; BLOOD DONOR; ENZYME IMMUNOASSAY; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; IMMUNOASSAY; IMMUNOBLOTTING; MAJOR CLINICAL STUDY; PHYLOGENY; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEROLOGY; UGANDA;

EID: 0030779694     PISSN: 02699370     EISSN: None     Source Type: Journal    
DOI: 10.1097/00002030-199715000-00006     Document Type: Article

References (29)

1. Myers G, Korber B, Hahn BH, et al. (Eds): Human Retroviruses and AIDS 1995. Los Alamos: Theoretical Biology and Biophysics, Los Alamos National Laboratory; 1995.
2. Robertson DL, Sharp PM, McCutchan FE, Hahn BH: Recombination in HIV-1. Nature 1995, 374:124-126.
3. Anderson RM, Schwartländer B, McCutchan F, Hu D: Implications of genetic variability in HIV for epidemiology and public health [letter]. Lancet 1996, 347:1778-1779.
4. Janssens W, Buvé A, Nkengasong JN: The puzzle of HIV-1 subtypes in Africa. AIDS 1997, 11:705-712.
5. Louwagie J, McCutchan FE, Mascola J, et al.: Genetic subtypes of HIV-1. AIDS Res Hum Retroviruses 1993, 9 (suppl I): S147-S150.
6. Leitner T: Genetic subtypes of HIV-1. In Human Retroviruses and AIDS 1996. Edited by Myers G, Korber B, Foley B, Jeang KT, Mellors JW, Wain-Hobson S. Los Alamos: Theoritical Biology and Biophysics Group, Los Alamos National Laboratory; 1996.
7. Louwagie J, McCutchan FE, Peeters M, et al.: Phylogenetic analysis of gag genes from 70 international HIV-1 isolates provides evidence for multiple genotypes. AIDS 1993, 7:769-780.
8. Louwagie J, Janssens W, Mascola J, et al.: Genetic diversity of the envelope glycoprotein from human immunodeficiency virus type 1 isolates of African origin. J Virol 1995, 69:263-271.
9. Loussert-Ajaka I, Chaix M-L, Korber B, et al.: Variability of human immunodeficiency virus type 1 group O strains isolated from Cameroonian patients living in France. J Virol 1995, 69:5640-5649.
10. Rayfield MA, Sullivan P, Bandea CJ, et al.: HIV-1 group O virus identified for the first time in the United States. Emerging Infect Dis 1996, 2:209-212.
11. Mas A, Quiñones-Mateu ME, Soriano V, Domingo F: env gene characterization of the first HIV type 1 group O Spanish isolate. AIDS Res Hum Retroviruses 1996, 12:1647-1649.
12. Brodine SK, Mascola JR, Weiss PJ, et al.: Detection of diverse HIV-1 genetic subtypes in the USA [letter]. Lancet 1995, 346:1198-1199.
13. McCutchan FE, Hegerich PA, Brennan TP, et al.: Genetic variants of HIV-1 in Thailand. AIDS Res Hum Retroviruses 1992, 8:1887-1895.
14. Soto-Ramirez LE, Renjifo B, McLane MF, et al.: HIV-1 Langerhans' cell tropism associated with heterosexual transmission of HIV. Science 1996, 271:1291-1293.
15. Nunn AJ, Kengeya-Kayondo JF, Malamba SS, Seeley JA, Mulder DW: Risk factors for HIV-1 infection in adults in a rural Ugandan community: a population study. AIDS 1994, 8:81-86.
16. Sewankambo NK, Wawer MJ, Gray RH, et al.: Demographic impact of HIV infection in rural Rakai district, Uganda: results of a population-based cohort study. AIDS 1994, 8:1707-1713.
17. Buonaguro L, Del Gaudio E, Monaco M, et al.. Heteroduplex mobility assay: phylogenetic analysis of V region sequences of human immunodeficiency virus type 1 isolates from Gulu, Northern Uganda. J Virol 1995, 69:7971-7981.
18. Horn DL, Guay L, Mmiro F, et al.: HIV-1 seroprevalence rates in women attending a prenatal clinic in Kampala, Uganda. Pediatr AIDS HIV Infect Fetus Adolesc 1993, 4:74-77.
19. Nunn AJ, Wagner HU, Okongo JM, et al.: HIV-1 infection in a Ugandan town on the trans-African highway: prevalence and risk factors. Int J STD AIDS 1996, 7:123-130.
20. Bruce C, Clegg C, Featherstone A, et al.: Presence of multiple genetic subtypes of human immunodeficiency virus type 1 provirus in Uganda. AIDS Res Hum Retroviruses 1994, 10:1543-1550.
21. Bachmann MH, Delwart EL, Shpaer EG, et al.: Rapid genetic characterization of HIV type 1 strains from four World Health Organization-sponsored vaccine evaluation sites using a heteroduplex mobility assay. AIDS Res Hum Retroviruses 1994, 10:1345-1353.
22. WHO Network for HIV Isolation and Characterization: HIV type 1 variation in World Health Organization-sponsored vaccine evaluation sites: genetic screening, sequence analysis, and preliminary biological characterization of selected viral strains. AIDS Res Hum Retroviruses 1994, 10:1327-1343.
23. Kaleebu P, Bobkov A, Cheing-Popov R, Bieniaez P, Garaev M, Weber J: Identification of HIV-1 subtype G from Uganda. AIDS Res Hum Retroviruses 1995, 11:657-659.
24. Janssens W, Heyndrickx L, Van de Peer Y, et al.: Molecular phylogeny of part of the env gene of HIV-1 strains isolated in Côte d'Ivoire. AIDS 1994, 8:21-26.
25. Loussert-Ajaka I, Ly T-D, Chaix M-L, et al.: HIV-1/HIV-2 seronegativity in HIV-1 subtype O infected patients. Lancet 1994, 343:1393-1394.
26. Schable C, Zekeng L, Pau C-P, et al.: Sensitivity of United States HIV antibody tests for detection of HIV-1 group O infections [letter]. Lancet 1994, 344:1333-1334.
27. ANT70 virus in Cameroon and Gabon [letter]. AIDS 1993, 7:1536-1538.
28. Gürtler L, Hauser PH, Eberle J, et al.: A new subtype of human immunodeficiency virus type 1 (MVP5180) from Cameroon. J Virol 1994, 68:1581-1585.
29. Zekeng L, Gurtler L, Afane Ze E, et al.: Prevalence of HIV-1 subtype O infection in Cameroon: preliminary results [letter]. AIDS 1994, 8:1626-1628.