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note
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32P signals were quantified by Phosphorlmager detection and are expressed as ratio to GAPDH.
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0027250250
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A rat brain cDNA library in the yeast-two hybrid prey vector pVP16 [A. B. Vojtek, S. M. Hollenberg, J. A. Cooper, Cell 74, 205 (1993)] was screened as described [S. Fields and O. Song, Nature 340, 245 (1994)] (14) with the bait vector pBTM116-NL2-1 (8). Of 16 prey clones isolated, pPrey500 encodes residues 1 to 287, and pPrey514 encodes residues 308 to 425 of PSD-95 (1). β-Galactosidase assays were corrected for protein concentration [M. D. Rose, F. Winston, P. Hieter, Methods in Yeast Genetics (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1990); Y. Hata and T. C. Südhof, J. Biol. Chem. 270, 13022 (1995)].
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A rat brain cDNA library in the yeast-two hybrid prey vector pVP16 [A. B. Vojtek, S. M. Hollenberg, J. A. Cooper, Cell 74, 205 (1993)] was screened as described [S. Fields and O. Song, Nature 340, 245 (1994)] (14) with the bait vector pBTM116-NL2-1 (8). Of 16 prey clones isolated, pPrey500 encodes residues 1 to 287, and pPrey514 encodes residues 308 to 425 of PSD-95 (1). β-Galactosidase assays were corrected for protein concentration [M. D. Rose, F. Winston, P. Hieter, Methods in Yeast Genetics (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1990); Y. Hata and T. C. Südhof, J. Biol. Chem. 270, 13022 (1995)].
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A rat brain cDNA library in the yeast-two hybrid prey vector pVP16 [A. B. Vojtek, S. M. Hollenberg, J. A. Cooper, Cell 74, 205 (1993)] was screened as described [S. Fields and O. Song, Nature 340, 245 (1994)] (14) with the bait vector pBTM116-NL2-1 (8). Of 16 prey clones isolated, pPrey500 encodes residues 1 to 287, and pPrey514 encodes residues 308 to 425 of PSD-95 (1). β-Galactosidase assays were corrected for protein concentration [M. D. Rose, F. Winston, P. Hieter, Methods in Yeast Genetics (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1990); Y. Hata and T. C. Südhof, J. Biol. Chem. 270, 13022 (1995)].
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Methods in Yeast Genetics
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A rat brain cDNA library in the yeast-two hybrid prey vector pVP16 [A. B. Vojtek, S. M. Hollenberg, J. A. Cooper, Cell 74, 205 (1993)] was screened as described [S. Fields and O. Song, Nature 340, 245 (1994)] (14) with the bait vector pBTM116-NL2-1 (8). Of 16 prey clones isolated, pPrey500 encodes residues 1 to 287, and pPrey514 encodes residues 308 to 425 of PSD-95 (1). β-Galactosidase assays were corrected for protein concentration [M. D. Rose, F. Winston, P. Hieter, Methods in Yeast Genetics (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1990); Y. Hata and T. C. Südhof, J. Biol. Chem. 270, 13022 (1995)].
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15644380154
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note
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+ channel isoform. The different prey vectors are from rat except for ZO-1 (mouse) and dlg-A (Drosophila) and encode the following residues; PSD-95, pVP16PSD-95-2 = 1-431; pVP16SAP90-5 = 69-150; pVP16SAP90-6 = 160-245. SAP102, PVP16SAP102-1 = 1-519. PSD-93, pVP16PSD-93-1 = 1-539. ZO1, pVP16ZO1-1 = 1-500. dlg-A, pVP16dlg-1 = 1-598. Nitric oxide synthase, PVP16NOS = 1-101.
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0030604722
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18 reversed-phase column (sequences: NMDAR2A, SNRRVYKKMPSIESDV; NL1-1, LPHPHPHPHSHSTTRV; NL1-2, LPHPHPHPHSHST; control, KFIEAGQYNSHLYGTSV). NMDAR2A and NL1-1 correspond to the COOH-terminus of NMDA2A and neuroligin 1, respectively. NL1 -2 is identical with NL1-1 except it lacks the last three, amino acids. The control peptide is composed of residues 597 to 613 from PSD-95/SAP90. Peptides were immobilized on a CM5 research grade sensor chip with the amine coupling kit (Pharmacia), equilibrated with 50 mM Hepes-NaOH (pH 8.0) containing 100 mM NaCI, and superfused with GST fusion proteins at different concentrations (flow rate, 20 μl/min). Binding activities (in resonance units) were measured as the difference between the baseline value determined 10 s before sample injection and the measurements taken at the indicated time points. All experiments were performed at 25°C. Data were analyzed with the BIA Evaluation program 2.1 (Pharmacia) [U. Joehnsson et al., BioTechniques 11, 520(1991)].
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Joehnsson, U.1
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15644366062
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note
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2, 0.2 M NaCl, and 0.5% NP-40 and eluted sequentially with 0.3 ml of the wash buffer containing 0.5 M NaCl and with 0.5 ml of 20 mM Hepes-NaOH (pH 8.0), 0.1 M NaCl, 10 mM EGTA, and 0.5% NP-40. Fractions were analyzed by SDS-polyacrylamide gel electrophoresis and by immunoblotting with antibodies to PSD-95 (polyclonal antiserum L667 and two independent monoclonal antibodies) and to neuroligin 1 (polyclonal antiserum L067). To exclude the possibility that PSD-95 directly interacts with neurexin 1β, extracts from COS cells transfected with full-length PSD-95 were affinity chromatographed on immobilized neurexin 1β in the absence and presence of recombinant neuroligin.
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15644381294
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note
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HEK293 cells were transfected with pCMVPSD95-1 encoding full-length rat PSD-95 either alone or together with pCMVNL18, pCMVNR2A, or pCMVNR1 encoding full-length neuroligin 1, NMDA2A, or NMDA1, respectively. Cells were stained with a mouse monoclonal antibody to PSD-95 and rabbit polyclonal antibodies to neuroligin 1 (L067) or the two NMDA receptors (from Chemicon). Images were obtained on a Bio-Rad MRC1024 confocal microscope.
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15644366198
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note
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Abbreviations for amino acids are as follows: A, Ala; C, Cys; D, Asp; E, Glu; F, Phe; G, Gly; H, His; I, lle; K, Lys; L, Leu; M, Met; N, Asn; P, Pro; Q, Gln; R, Arg; S, Ser; T, Thr; V, Val; W, Trp; Y, Tyr.
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36
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note
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We thank A. Roth, E. Borowicz, and I. Leznicki for excellent technical assistance; M. B. Kennedy (CalTech) for monoclonal antibodies to PSD-95; S. Nakanishi (Kyoto) for NMDA receptor cDNA clones; and M. Missler, M. S. Brown, and J. L. Goldstein for advice. Partially supported by grants from the NIH (RO1-MH52804), the Perot Family Foundation, and the ERATO (Japan Science and Technology Co.). Y.H. was supported by a postdoctoral fellowship from the HFSP, and T.W.R. from the DFG.
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