Residues at the carboxy terminus of T4 DNA polymerase are important determinants for interaction with the polymerase accessory proteins

Biochemistry

Volumn 36, Issue 34, 1997, Pages 10474-10481

  Goodrich, Leo D ^a   Lin, Tsung Chung ^c   Spicer, Eleanor K ^b   Jones, Christopher ^c   Konigsberg, William H ^c  

^a Protein Sciences Corp   (United States)

^b MEDICAL UNIVERSITY OF SOUTH CAROLINA   (United States)

^c YALE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE; DOUBLE STRANDED DNA; EXONUCLEASE; PROTEIN; SINGLE STRANDED DNA;

ARTICLE; CARBOXY TERMINAL SEQUENCE; CRYSTAL STRUCTURE; DNA BINDING; DNA TEMPLATE; MUTANT; NONHUMAN; PRIORITY JOURNAL;

AMINO ACID SEQUENCE; BACTERIOPHAGE T4; CLONING, MOLECULAR; DNA REPLICATION; DNA-BINDING PROTEINS; DNA-DIRECTED DNA POLYMERASE; ENZYME ACTIVATION; EXONUCLEASES; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUTAGENESIS; RECOMBINANT PROTEINS; SEQUENCE DELETION; SEQUENCE HOMOLOGY, AMINO ACID; TRANS-ACTIVATORS; VIRAL PROTEINS;

EID: 0030765020     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9708949     Document Type: Article

References (44)

1. Alberts, B. M., Barry, J., Bedinger, B. P., Burke, R. L., Hibner, U., Liu, C. C., & Sheridan, R. (1980) UCLA Symp. Mol. Cell Biol. 19, 449-473.
2. Andrake, M., Guild, N., Hsu, T., Gold, L., Tuerk, C., & Karam, J. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 7942-7946.
3. Barry, J., & Alberts, B. (1972) Proc. Natl. Acad. Sci. U.S.A. 69, 2717-2721.
4. Bedinger, P., & Alberts, B. M. (1983) J. Biol. Chem. 258, 9649-9656.
5. Berdis, A. J., Soumillion, P., & Benkovic, S. J. (1996) Proc. Nat. Acad. Sci. U.S.A. 93, 12822-12827.
6. Berthomme, H., Monahan, S. J., Parris, D. S., Jacquemont, B., & Epstein, A. L. (1995) J. Virol. 69, 2811-2818.
7. Capson, T. L., Benkovic, S. J., & Nossal, N. G. (1991) Cell 65, 249-258.
8. Cha, T.-A., & Alberts, B. M. (1989) J. Biol. Chem. 264, 12220-12225.
9. de Waard, A., Paul, A. V., & Lehman, I. R. (1965) Proc. Natl. Acad. Sci. U.S.A. 54, 1241-1248.
10. Digard, P., Bebrin, W. R., Weisshart, K., & Coen, D. M. (1993) J. Virol. 67, 398-406.
11. Herendeen, D. R., Kassavetis, G. A., Barry, J., Alberts, B. M., & Geidushek, E. P. (1989) Science 245, 952-958.
12. Hernandez, T. R., & Lehman, I. R. (1990) J. Biol. Chem. 265, 11227-11232.
13. Hinton, D. M., Silver, L. L., & Nossal, N. G. (1985) J. Biol. Chem. 260, 12851-12857.
14. Ikura, M., Clore, G. M., Gronenborn, A. M., Zhu, G., Klee, C. B., & Bax, A. (1992) Science 256, 632-638.
15. Jarvis, T. C., Paul, L. S., & von Hippel, P. H. (1989a) J. Biol. Chem. 264, 12709-12716.
16. Jarvis, T. C., Paul, L. S., Hockensmith, J. W., & von Hippel, P. H. (1989b) J. Biol. Chem. 264, 12717-12729.
17. Kaboord, B. F., & Benkovic, S. J. (1995) Curr. Biol. 5, 149-157.
18. Kong, X.-P., Onrust, R., O'Donnell, M., & Kuriyan, J. (1992) Cell 69, 425-437.
19. Kornberg, A., & Baker, T. A. (1992) DNA Replication, 2nd ed., W. H. Freeman & Co., New York.
20. Kunkel, T. A. (1985) Proc. Natl. Acad. Sci. U.S.A. 82, 488-492.
21. Lin, T.-C., Karam, G., & Konigsberg, W. H. (1994) J. Biol. Chem. 269, 19286-19294.
22. Liu, C. C., & Alberts, B. M. (1981) J. Biol. Chem. 256, 2813-2820.
23. Mace, D. C., & Alberts, B. M. (1984a) J. Mol. Biol. 177, 279-293.
24. Mace, D. C., & Alberts, B. M. (1984b) J. Mol. Biol. 177, 313-327.
25. Morris, C. F., Hama-Inaba, H., Mace, D., Sinha, N. K., & Alberts, B. (1979) J. Biol. Chem. 254, 6787-6796.
26. Nossal, N. G. (1974) in DNA Replication (Wickner, R., Ed.) pp 71-81, Marcel Dekker, Inc., New York.
27. Nossal, N. G. (1979) J. Biol. Chem. 254, 6026-6031.
28. Nossal, N. G. (1992) FASEB J. 6, 871-878.
29. Nossal, N. G., & Peterlin, B. M. (1979) J. Biol. Chem. 254, 6032-6037.
30. Nossal, N. G., & Alberts, B. M. (1983) in Bacteriophage T4 (Mathews, C. K., Kutter, E. M., Mosig, G., & Berget, P. B., Eds.) pp 71-81, American Society for Microbiology, Washington, DC.
31. Onrust, R., Stukenberg, P. T., & O'Donnell, M. (1991) J. Biol. Chem. 266, 21681-21686.
32. Richardson, R. W., & Nossal, N. G. (1989) J. Biol. Chem. 264, 4732-4739.
33. Sambrook, J., Fritsch, E. F., & Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
34. Sancar, A., & Hearst, J. E. (1993) Science 259, 1415-1420.
35. Sattar, A. K. M., Lin, T. C., Jones, C., & Konigsberg, W. H. (1996) Biochemistry 35, 16621-16629.
36. Shamoo, Y., Friedman, A. M., Parsons, M. R., Konigsberg, W. H., & Steitz, T. A. (1995) Nature 376, 362-366.
37. Spicer, E. K., Rush, J., Fung, C, Reha-Krantz, L. J., Karam, J. D., & Konigsberg, W. H. (1988) J. Biol. Chem. 263, 7478-7486.
38. Stow, N. (1993) Nucleic Acids Res. 21, 87-92.
39. Stukenberg, P. T., Studwell-Vaughn, P. S., & O'Donnell, M. (1991) J. Biol. Chem. 266, 11328-11334.
40. Venkatesan, M., & Nossal, N. G. (1982) J. Biol. Chem. 257, 12435-12443.
41. Wang, C.-C., Yeh, L.-S., & Karam, J. (1996) J. Biol. Chem., 270, 26558-26564.
42. Wang, J., Sattar A. K. M., Wang, C. C., Karam, J., Konigsberg, W. H., & Steitz, T. A. (1997) Cell (in press).
43. Winkelman, J. W., Kassavetis, G. A., & Geidushek, E. P. (1994) J. Bacteriol. 176, 1164-1171.
44. Young, M. C., Reddy, M. K., & von Hippel, P. H. (1992) Biochemistry 31, 8675-8690.