Who's who among the Saccharomyces cerevisiae actin-related proteins? A classification and nomenclature proposal for a large family

Yeast

Volumn 13, Issue 11, 1997, Pages 1053-1058

  Poch, Olivier ^a   Winsor, Barbara ^a  

^a INSTITUT DE BIOLOGIE MOLÉCULAIRE ET CELLULAIRE   (France)

Author keywords

Actin related proteins; Alignment; Genome; Nomenclature; S. cerevisiae

Indexed keywords

ACTIN; ACTIN RELATED PROTEIN; FUNGAL PROTEIN; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; ENZYME LOCALIZATION; GENOME; NOMENCLATURE; NONHUMAN; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE; SEQUENCE HOMOLOGY;

ACTINS; PHYLOGENY; SACCHAROMYCES CEREVISIAE; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY, AMINO ACID; TERMINOLOGY;

SACCHAROMYCES CEREVISIAE;

EID: 0030754347     PISSN: 0749503X     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-0061(19970915)13:11<1053::AID-YEA164>3.0.CO;2-4     Document Type: Article

References (28)

1. Bergez, P., Doignon, F. and Crouzet, M. (1995). The sequence of a 44,420 bp fragment located on the left arm of chromosome XIV from Saccharomyces cerevisiae. Yeast 11, 967-974.
2. Bork, P., Sander, C. and Valencia, A. (1992). An ATPase domain common to prokaryotic cell cycle proteins, sugar kinases, actin, and Hsp70 heat shock proteins. Proc. Natl. Acad. Sci. USA 89, 7290-7294.
3. Carlier, M. F. (1990). Actin polymerization and ATP hydrolysis. Adv. Biophys. 26, 51-73.
4. Clark, S. W. and Meyer, D. I. (1994). ACT3: a putative centractin homolog in S. cerevisiae is required for proper orientation of the mitotic spindle. J. Cell. Biol. 127, 129-138.
5. Devereux, J., Haeberli, P. and Smithies, O. (1984). A comprehensive set of sequence analysis of the VAX. Nucl. Acids Res. 12, 387-395.
6. Dujon, B. (1996). The yeast genome project: what did we learn? Trends Genet. 12, 263-270.
7. Frankel, S. and Mooseker, M. S. (1996). The actin-related proteins. Curr. Op. Cell. Biol. 8, 30-37.
8. Goffeau, A. (1994). Genes in search of functions. Nature 369, 101-102.
9. Harata, M., Karwan, M. A. and Wintersberger, U. (1994). An essential gene of Saccharomyces cerevisiae coding for an actin-related protein. Proc. Natl. Acad. Sci. USA 91, 8258-8262.
10. Hieter, P. D. E., Bassett, J. and Valle, D. (1996). The yeast genome - a common currency. Nat. Genet. 13253-13255.
11. Holmes, K. C., Sander, C. and Valencia, A. (1993). A new ATP-binding fold in actin, hexokinase and HSC70. Trends Cell. Biol. 3, 53-59.
12. Huang, M.-E., Souciet, J.-L., Chuat, J.-C. and Galibert, F. (1996). Identification of ACT4, a novel essential actin-related gene in the yeast Saccharomyces cerevisiae. Yeast 12, 839-848.
13. Jiang, Y. W. and Stillman, D. J. (1996). Epigenetic effects on yeast transcription caused by mutations in an actin-related protein present in the nucleus. Gen. Dev. 10, 604-619.
14. Kabsch, W., Mannherz, H. G., Suck, D., Pai, E. F. and Holmes, K. C. (1990). Atomic structure of the actin: DNaseI complex. Nature 347, 37-44.
15. Lees-Miller, J. P., Henry, G. and Helfman, D. M. (1992a). Identification of act2, an essential gene in the fission yeast Schizosaccharomyces pombe that encodes a protein related to actin. Proc. Natl. Acad. Sci. USA 89, 80-93.
16. Moreau, V., Madania, A., Martin, R. P. and Winsor, B. (1996). The Saccharomyces cerevisiae actin-related protein Arp2 is involved in the actin cytoskeleton. J. Cell. Biol. 134, 117-132.
17. Muhua, L., Karpova, T. S. and Cooper, J. A. (1994). A yeast actin-related protein homologous to that found in the vertebrate dynactin complex. Cell 78, 669-680.
18. Mullins, R. D., Kelleher, J. F. and Pollar, T. D. (1996). Actin' like actin? Trends Cell. Biol. 6, 208-212.
19. Oliver, S. G. (1996). From DNA sequence to biological function. Nature 379, 597-600.
20. Pollard, T. D. (1990). Actin. Curr. Op. Cell. Biol. 2, 33-40.
21. Pollard, T. D. (1993). Actin and actin-binding proteins. In Kreis, T. and Vale, R (Eds), Guide to the Cytoskeletal and Motor Proteins. Oxford University Press, pp. 3-11.
22. Schroer, T. A., Fyrberg, E., Cooper, J. A., et al. (1994). Actin-related protein nomenclature and classification. J. Cell. Biol. 127, 1777-1778.
23. Schwob, E., Alt, G., Andres, S., Dirheimer, G. and Martin, R. P. (1988). ACT2, a novel split gene coding for an actin-like protein. Yeast 4, S108.
24. Schwob, E. and Martin, R. P. (1992). New yeast actin-like gene required late in the cell cycle. Nature 355, 179-182.
25. Sheterline, P. and Sparrow, J. C. (1994). Actin. Protein Profile 1, 1-121.
26. Thompson, J. D., Higgins, D. G. and Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weights matrix choice. Nucl. Acids Res 22, 4673-1680.
27. Weber, V., Harata, M., Hauser, H. and Wintersberger, U. (1995). The actin-related protein Act3p of Saccharomyces cerevisiae is located in the nucleus. Mol. Biol. Cell. 6, 1263-1270.
28. Winsor, B. and Schiebel, E. (1997). An overview of the Saccharomyces cerevisiae microtubule and microfilament cytoskeleton. Yeast 13, 399-434.