-
4
-
-
0025196845
-
-
Taylor, J-S.; Garrett, D. S.; Brockie, I. R.; Svoboda, D. L.; Telser, J. Biochemistry 1990, 29, 8858-8866.
-
(1990)
Biochemistry
, vol.29
, pp. 8858-8866
-
-
Taylor, J.-S.1
Garrett, D.S.2
Brockie, I.R.3
Svoboda, D.L.4
Telser, J.5
-
5
-
-
0029338999
-
-
Kim, J-K; Patel, D.; Choi, B-S. Photochem. Photobiol. 1995, 62, 44-50.
-
(1995)
Photochem. Photobiol.
, vol.62
, pp. 44-50
-
-
Kim, J.-K.1
Patel, D.2
Choi, B.-S.3
-
6
-
-
0028863468
-
-
Vassylyev, D. G.; Kashiwagi, T.; Mikami, Y.; Ariyoshi, M.; Iwai, S.; Ohtsuka, E.; Morikawa, K. Cell 1995, 83, 773-782.
-
(1995)
Cell
, vol.83
, pp. 773-782
-
-
Vassylyev, D.G.1
Kashiwagi, T.2
Mikami, Y.3
Ariyoshi, M.4
Iwai, S.5
Ohtsuka, E.6
Morikawa, K.7
-
7
-
-
0021760450
-
-
Rao, S. N.; Keepers, J. W.; Kollman, P. A. Nucleic Acids Res. 1984, 12, 4789-4807.
-
(1984)
Nucleic Acids Res.
, vol.12
, pp. 4789-4807
-
-
Rao, S.N.1
Keepers, J.W.2
Kollman, P.A.3
-
8
-
-
0021908112
-
-
Pearlman, D. A.; Holbrook, S. R.; Pirkle, D. H.; Kim, S-H. Science 1985, 227, 1304-1308.
-
(1985)
Science
, vol.227
, pp. 1304-1308
-
-
Pearlman, D.A.1
Holbrook, S.R.2
Pirkle, D.H.3
Kim, S.-H.4
-
9
-
-
0020493719
-
-
Dickerson, R. E.; Drew, H. R.; Conner, B. N.; Wing, R. M.; Fratini, A. V.; Kopka, M. L. Science 1982, 216, 475-485.
-
(1982)
Science
, vol.216
, pp. 475-485
-
-
Dickerson, R.E.1
Drew, H.R.2
Conner, B.N.3
Wing, R.M.4
Fratini, A.V.5
Kopka, M.L.6
-
10
-
-
0025214519
-
-
Alderfer, J. L.; G. Raghunathan, G.; Kieber-Emmons, T.; Rein, R. J. Biomol. Struct. Dyn. 1990, 7, 899-913.
-
(1990)
J. Biomol. Struct. Dyn.
, vol.7
, pp. 899-913
-
-
Alderfer, J.L.1
G. Raghunathan, G.2
Kieber-Emmons, T.3
Rein, R.4
-
12
-
-
0029804674
-
-
Miaskiewicz, K.; Miller, J.; Cooney, M.; Osman, R. J. Am. Chem. Soc. 1996, 118, 9156-9163.
-
(1996)
J. Am. Chem. Soc.
, vol.118
, pp. 9156-9163
-
-
Miaskiewicz, K.1
Miller, J.2
Cooney, M.3
Osman, R.4
-
14
-
-
0029633186
-
-
Pearlman, D. A.; Case, D. A.; Caldwell, J. W.; Ross, W. S.; Cheatham, T. E.; Debolt, S.; Ferguson, D.; Seibel, G.; Kollman, P. A. Comput. Phys. Commun. 1995, 91, 1-41.
-
(1995)
Comput. Phys. Commun.
, vol.91
, pp. 1-41
-
-
Pearlman, D.A.1
Case, D.A.2
Caldwell, J.W.3
Ross, W.S.4
Cheatham, T.E.5
Debolt, S.6
Ferguson, D.7
Seibel, G.8
Kollman, P.A.9
-
15
-
-
0029011701
-
-
Cornell, W. D.; Cieplak, P.; Bayly, C. I.; Gould, I. R.; Merz, K. M.; Ferguson, D. M.; Spellmeyer, D. C.; Fox, T.; Caldwell, J. W.; Kollman, P. A. J. Am. Chem. Soc. 1995, 117, 5179-5197.
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 5179-5197
-
-
Cornell, W.D.1
Cieplak, P.2
Bayly, C.I.3
Gould, I.R.4
Merz, K.M.5
Ferguson, D.M.6
Spellmeyer, D.C.7
Fox, T.8
Caldwell, J.W.9
Kollman, P.A.10
-
16
-
-
33646940952
-
-
Ryckaert, J. P.; Ciccotti, G.; Berendsen, H. J. C. J. Comp. Phys. 1977, 23, 327-341.
-
(1977)
J. Comp. Phys.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.P.1
Ciccotti, G.2
Berendsen, H.J.C.3
-
17
-
-
33750587438
-
-
Berendsen, H. J. C.; Postma, J. P. M.; van Gunsteren, W. F.; DiNola, A.; Haak, J. R. J. Comp. Phys. 1984, 81, 3684-3690.
-
(1984)
J. Comp. Phys.
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
DiNola, A.4
Haak, J.R.5
-
18
-
-
33645961739
-
-
Essmann, U.; Perera, L.; Berkowitz, M. L.; Darden, T.; Lee, H.; Pedersen, L. G. J. Chem. Phys. 1995, 103, 8577-8593.
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 8577-8593
-
-
Essmann, U.1
Perera, L.2
Berkowitz, M.L.3
Darden, T.4
Lee, H.5
Pedersen, L.G.6
-
19
-
-
0024556774
-
-
Ravishanker, G.; Swaminathan, S.; Beveridge, D. L.; Lavery, R.; Sklenar, H. J. Biomol. Struct. Dyn. 1989, 6, 669-99.
-
(1989)
J. Biomol. Struct. Dyn.
, vol.6
, pp. 669-699
-
-
Ravishanker, G.1
Swaminathan, S.2
Beveridge, D.L.3
Lavery, R.4
Sklenar, H.5
-
23
-
-
0030953141
-
Molecular Dynamics Simulations Highlight the Structural Differences among DNA:DNA, RNA:RNA and DNA:RNA Hybrid Duplexes
-
submitted for publication
-
Analysis of the counterions and hydration of PME simulated DNA structures is discussed in the following: Cheatham, T. E.; Kollman, P. A. Molecular Dynamics Simulations Highlight the Structural Differences Among DNA:DNA, RNA:RNA and DNA:RNA Hybrid Duplexes. J. Am. Chem. Soc. submitted for publication.
-
J. Am. Chem. Soc.
-
-
Cheatham, T.E.1
Kollman, P.A.2
-
25
-
-
0022069873
-
-
Cadet, J.; Hruska, F. E.; Grand, A. Biopolymers 1985, 24, 897-903.
-
(1985)
Biopolymers
, vol.24
, pp. 897-903
-
-
Cadet, J.1
Hruska, F.E.2
Grand, A.3
-
27
-
-
0027215760
-
-
Taylor, J-S.; Svoboda, D. L.; Smith, C. A.; Sancar, A. J. Biol. Chem. 1993, 268, 10694-10700.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 10694-10700
-
-
Taylor, J.-S.1
Svoboda, D.L.2
Smith, C.A.3
Sancar, A.4
-
28
-
-
1842401412
-
-
Cheatham, T. E.; Konerding, D.; James, T. L.; Kollman, P. A. Work in progress
-
Cheatham, T. E.; Konerding, D.; James, T. L.; Kollman, P. A. Work in progress.
-
-
-
|