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Volumn 89, Issue 6, 1997, Pages 849-858

The yeast tRNA splicing endonuclease: A tetrameric enzyme with two active site subunits homologous to the archaeal tRNA endonucleases

Author keywords

[No Author keywords available]

Indexed keywords

ENDONUCLEASE; POLYCLONAL ANTIBODY; TRANSFER RNA;

EID: 0030730820     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0092-8674(00)80270-6     Document Type: Article
Times cited : (195)

References (49)
  • 1
    • 0024935821 scopus 로고
    • RNA splicing in yeast
    • Abelson, J. (1991). RNA splicing in yeast. Harvey Lect. 85, 1-42.
    • (1991) Harvey Lect. , vol.85 , pp. 1-42
    • Abelson, J.1
  • 2
    • 0029906970 scopus 로고    scopus 로고
    • The 2′-5′ ligase from Escherichia coli
    • Arn, E.A.,and Abelson, J.N. (1996). The 2′-5′ ligase from Escherichia coli. J. Biol.Chem. 271, 31145-31153.
    • (1996) J. Biol.chem. , vol.271 , pp. 31145-31153
    • Arn, E.A.1    Abelson, J.N.2
  • 3
    • 0026574523 scopus 로고
    • Participation of the intron in the reaction catalyzed by the Xenopus tRNA splicing endonuclease
    • Baldi, M.I., Mattoccia, E., Bufardeci, E., Fabbri, S., and Tocchini-Valentini, G.P. (1992). Participation of the intron in the reaction catalyzed by the Xenopus tRNA splicing endonuclease. Science 255, 1404-1408.
    • (1992) Science , vol.255 , pp. 1404-1408
    • Baldi, M.I.1    Mattoccia, E.2    Bufardeci, E.3    Fabbri, S.4    Tocchini-Valentini, G.P.5
  • 4
    • 0029126514 scopus 로고
    • Analyzing protein-protein interactions using 2-hybrid system
    • Bartel, P.L., and Fields, S. (1995). Analyzing protein-protein interactions using 2-hybrid system. Meth. Enzymol. 254, 241-263.
    • (1995) Meth. Enzymol. , vol.254 , pp. 241-263
    • Bartel, P.L.1    Fields, S.2
  • 5
    • 0027452928 scopus 로고
    • Multiple nucleotide cofactor use by yeast ligase in tRNA splicing: Evidence for independent ATP- and GTP-binding sites
    • Belford, H.G., Westaway, S.K., Abelson, J., and Greer, C.L. (1993). Multiple nucleotide cofactor use by yeast ligase in tRNA splicing: evidence for independent ATP- and GTP-binding sites. J. Biol. Chem. 268, 2444-2450.
    • (1993) J. Biol. Chem. , vol.268 , pp. 2444-2450
    • Belford, H.G.1    Westaway, S.K.2    Abelson, J.3    Greer, C.L.4
  • 6
    • 0028137054 scopus 로고
    • Selfsplicing group-I intron in cyanobacterial initiator methionine tRNA: Evidence for lateral transfer of introns in bacteria
    • Biniszkiewicz, D., Cesnaviciene, E., and Shub, D.A. (1994). Selfsplicing group-I intron in cyanobacterial initiator methionine tRNA: evidence for lateral transfer of introns in bacteria. EMBO J. 13, 4629-4635.
    • (1994) EMBO J. , vol.13 , pp. 4629-4635
    • Biniszkiewicz, D.1    Cesnaviciene, E.2    Shub, D.A.3
  • 8
    • 0027403542 scopus 로고
    • An intron within the 16S rRNA gene of the archaeon Pyrobaculum aerophilum
    • Burggraf, S., Larsen, N., Woese, C.R., and Stetter, K.O. (1993). An intron within the 16S rRNA gene of the archaeon Pyrobaculum aerophilum. Proc. Natl. Acad. Sci. USA 90, 2547-2550.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 2547-2550
    • Burggraf, S.1    Larsen, N.2    Woese, C.R.3    Stetter, K.O.4
  • 9
    • 0003017978 scopus 로고
    • Structure and mechanism of the large catalytic RNAs: Group I and group II introns and ribonuclease P
    • R.F. Gesteland and J.F. Atkins, eds. (Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press)
    • Cech, T. (1993). Structure and mechanism of the large catalytic RNAs: group I and group II introns and ribonuclease P. In RNA World, R.F. Gesteland and J.F. Atkins, eds. (Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press), pp. 239-270.
    • (1993) RNA World , pp. 239-270
    • Cech, T.1
  • 10
    • 0030297537 scopus 로고    scopus 로고
    • A novel mechanism for regulating activity of a transcription factor that controls the unfolded protein response
    • Cox, J.S., and Walter, P. (1996). A novel mechanism for regulating activity of a transcription factor that controls the unfolded protein response. Cell 86, 391-404.
    • (1996) Cell , vol.86 , pp. 391-404
    • Cox, J.S.1    Walter, P.2
  • 13
    • 0024406857 scopus 로고
    • A novel genetic system to detect protein-protein interactions
    • Fields, S., and Song, O.K. (1989). A novel genetic system to detect protein-protein interactions. Nature 340, 245-246.
    • (1989) Nature , vol.340 , pp. 245-246
    • Fields, S.1    Song, O.K.2
  • 15
    • 0020794812 scopus 로고
    • RNA ligase in bacteria: Formation of a 2′,5′ linkage by an E. coli extract
    • Greer, C., Javor, G., and Abelson, J.N. (1983). RNA ligase in bacteria: formation of a 2′,5′ linkage by an E. coli extract. Cell 33, 899-906.
    • (1983) Cell , vol.33 , pp. 899-906
    • Greer, C.1    Javor, G.2    Abelson, J.N.3
  • 17
    • 0028685207 scopus 로고
    • Identification of interacting proteins using the 2-hybrid system
    • Hannon, G., and Bartel, P. (1995). Identification of interacting proteins using the 2-hybrid system. Meth. Mol. Cell. Biol. 5, 289-297.
    • (1995) Meth. Mol. Cell. Biol. , vol.5 , pp. 289-297
    • Hannon, G.1    Bartel, P.2
  • 18
    • 0003448569 scopus 로고
    • Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
    • Harlow, E., and Lane, D. (1988). Antibodies: A Laboratory Manual (Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press).
    • (1988) Antibodies: A Laboratory Manual
    • Harlow, E.1    Lane, D.2
  • 19
    • 0028983813 scopus 로고
    • Improvement of an in-gel digestion procedure for the micropreparation of internal protein fragments for amino acid sequencing
    • Hellman, U., Wernstedt, C., Gonez, J., and Heldin, C.H. (1995). Improvement of an in-gel digestion procedure for the micropreparation of internal protein fragments for amino acid sequencing. Anal. Biochem. 224, 451-455.
    • (1995) Anal. Biochem. , vol.224 , pp. 451-455
    • Hellman, U.1    Wernstedt, C.2    Gonez, J.3    Heldin, C.H.4
  • 20
    • 0025271545 scopus 로고
    • Accumulation of pre-tRNA splicing 2/3 intermediates in a Saccharomyces cerevisiae mutant
    • Ho, C.K., Rauhut, R., Vijayraghavan, U., and Abelson, J. (1990). Accumulation of pre-tRNA splicing 2/3 intermediates in a Saccharomyces cerevisiae mutant. EMBO J. 9, 1245-1252.
    • (1990) EMBO J. , vol.9 , pp. 1245-1252
    • Ho, C.K.1    Rauhut, R.2    Vijayraghavan, U.3    Abelson, J.4
  • 21
    • 0021716406 scopus 로고
    • A short amino-acid sequence able to specify nuclear location
    • Kalderon, D., Roberts, B.L., Richardson, W.D., and Smith, A.E. (1984). A short amino-acid sequence able to specify nuclear location. Cell 39, 499-509.
    • (1984) Cell , vol.39 , pp. 499-509
    • Kalderon, D.1    Roberts, B.L.2    Richardson, W.D.3    Smith, A.E.4
  • 22
    • 0022407822 scopus 로고
    • An intron in the 23S rRNA gene of the Archaebacterium Desulfurococcus mobilis
    • Kjems, J., and Garrett, R.A. (1985). An intron in the 23S rRNA gene of the Archaebacterium Desulfurococcus mobilis. Nature 318, 675-677.
    • (1985) Nature , vol.318 , pp. 675-677
    • Kjems, J.1    Garrett, R.A.2
  • 23
    • 0024517569 scopus 로고
    • Comparison of tRNA and rRNA intron splicing in the extreme thermophile and Archaebacterium Desulfurococcus mobilis
    • Kjems, J., Jensen, J., Olesen, T., and Garrett, R.A. (1989). Comparison Of tRNA and rRNA intron splicing in the extreme thermophile and Archaebacterium Desulfurococcus mobilis. Can. J. Microbiol. 35, 210-214.
    • (1989) Can. J. Microbiol. , vol.35 , pp. 210-214
    • Kjems, J.1    Jensen, J.2    Olesen, T.3    Garrett, R.A.4
  • 24
    • 0030730242 scopus 로고    scopus 로고
    • Properties of the H. volcanii tRNA intron endonuclease reveal a relationship between the archaeal and eucaryal tRNA intron processing systems
    • this issue
    • Kleman-Leyer, K., Armbruster, D.A., and Daniels,C.J. (1997). Properties of the H. volcanii tRNA intron endonuclease reveal a relationship between the archaeal and eucaryal tRNA intron processing systems. Cell, this issue.
    • (1997) Cell
    • Kleman-Leyer, K.1    Armbruster, D.A.2    Daniels, C.J.3
  • 25
    • 0021951252 scopus 로고
    • tRNA splicing in Saccharomyces cerevisiae: Secondary and tertiary structures of the substrates
    • Lee, M.C., and Knapp, G. (1985). tRNA splicing in Saccharomyces cerevisiae: secondary and tertiary structures of the substrates. J. Biol. Chem. 260, 3108-3115.
    • (1985) J. Biol. Chem. , vol.260 , pp. 3108-3115
    • Lee, M.C.1    Knapp, G.2
  • 26
    • 0026356891 scopus 로고
    • Predicting coiled coils from protein sequences
    • Lupas, A., Vandyke, M.,and Stock, J. (1991). Predicting coiled coils from protein sequences. Science 252, 1162-1164.
    • (1991) Science , vol.252 , pp. 1162-1164
    • Lupas, A.1    Vandyke, M.2    Stock, J.3
  • 27
    • 0028556367 scopus 로고
    • Dynamic RNA-RNA interactions in the spliceosome
    • Madhani, H.D., and Guthrie, C. (1994). Dynamic RNA-RNA interactions in the spliceosome. Annu. Rev. Genet. 28, 1-26.
    • (1994) Annu. Rev. Genet. , vol.28 , pp. 1-26
    • Madhani, H.D.1    Guthrie, C.2
  • 28
    • 0025991455 scopus 로고
    • An enzyme from Saccharomyces cerevisiae uses NAD+ to transfer the splice junction 2′-phosphate from ligated tRNA to an acceptor molecule
    • McCraith, S.M., and Phizicky, E.M. (1991). An enzyme from Saccharomyces cerevisiae uses NAD+ to transfer the splice junction 2′-phosphate from ligated tRNA to an acceptor molecule. J. Biol. Chem. 266, 11986-11992.
    • (1991) J. Biol. Chem. , vol.266 , pp. 11986-11992
    • McCraith, S.M.1    Phizicky, E.M.2
  • 29
    • 0027463641 scopus 로고
    • Yeast tRNA-splicing endonuclease cleaves precursor tRNA in a random pathway
    • Miao, F., and Abelson, J. (1993). Yeast tRNA-splicing endonuclease cleaves precursor tRNA in a random pathway. J. Biol. Chem. 268, 672-677.
    • (1993) J. Biol. Chem. , vol.268 , pp. 672-677
    • Miao, F.1    Abelson, J.2
  • 30
    • 0001877802 scopus 로고
    • Splicing of precursors to mRNAs by the spliceosome
    • R.F. Gesteland and J.F. Atkins, eds. (Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press)
    • Moore, M., Query, C.C., and Sharp, P. (1993). Splicing of precursors to mRNAs by the spliceosome. In RNA World, R.F. Gesteland and J.F. Atkins, eds. (Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press), pp. 303-349.
    • (1993) RNA World , pp. 303-349
    • Moore, M.1    Query, C.C.2    Sharp, P.3
  • 31
    • 0021768581 scopus 로고
    • Transfer RNA splicing in Saccharomyces cerevisiae: Defining the substrates
    • Ogden, R.C., Lee, M.C., and Knapp, G. (1984). Transfer RNA splicing in Saccharomyces cerevisiae: defining the substrates. Nucl. Acids Res. 12, 9367-9382.
    • (1984) Nucl. Acids Res. , vol.12 , pp. 9367-9382
    • Ogden, R.C.1    Lee, M.C.2    Knapp, G.3
  • 32
    • 0028340519 scopus 로고
    • Expression of a yeast intron-containing tRNA in the Archaeon Haloferax volcanii
    • Palmer, J.R., Nieuwlandt, D.T., and Daniels, C.J. (1994). Expression of a yeast intron-containing tRNA in the Archaeon Haloferax volcanii. J. Bacteriol. 176, 3820-3823.
    • (1994) J. Bacteriol. , vol.176 , pp. 3820-3823
    • Palmer, J.R.1    Nieuwlandt, D.T.2    Daniels, C.J.3
  • 33
    • 0020710638 scopus 로고
    • Precise excision of intervening sequences from precursor tRNAs by a membrane-associated yeast endonuclease
    • Peebles, C.L., Gegenheimer, P., and Abelson, J. (1983). Precise excision of intervening sequences from precursor tRNAs by a membrane-associated yeast endonuclease. Cell 32, 525-536.
    • (1983) Cell , vol.32 , pp. 525-536
    • Peebles, C.L.1    Gegenheimer, P.2    Abelson, J.3
  • 34
    • 0025155503 scopus 로고
    • Yeast tRNA-splicing endonuclease is a heterotrimeric enzyme
    • Rauhut, R., Green, P.R., and Abelson, J. (1990). Yeast tRNA-splicing endonuclease is a heterotrimeric enzyme. J. Biol. Chem. 265, 18180-18184.
    • (1990) J. Biol. Chem. , vol.265 , pp. 18180-18184
    • Rauhut, R.1    Green, P.R.2    Abelson, J.3
  • 35
    • 0026599998 scopus 로고
    • Self-splicing introns in tRNA genes of widely divergent bacteria
    • Reinholdhurek, B., and Shub, D.A. (1992). Self-splicing introns in tRNA genes of widely divergent bacteria. Nature 357, 173-176.
    • (1992) Nature , vol.357 , pp. 173-176
    • Reinholdhurek, B.1    Shub, D.A.2
  • 36
    • 0024291338 scopus 로고
    • Substrate recognition and splice site determination in yeast tRNA splicing
    • Reyes, V.M., and Abelson, J. (1988). Substrate recognition and splice site determination in yeast tRNA splicing. Cell 55, 719-730.
    • (1988) Cell , vol.55 , pp. 719-730
    • Reyes, V.M.1    Abelson, J.2
  • 37
    • 0026078249 scopus 로고
    • 2 interdependent basic domains in nucleoplasmin nuclear targeting sequence: Identification of a class of bipartite nuclear targeting sequence
    • Robbins, J., Dilworth, S.M., Laskey, R.A., and Dingwall, C. (1991). 2 interdependent basic domains in nucleoplasmin nuclear targeting sequence: identification of a class of bipartite nuclear targeting sequence. Cell 64, 615-623.
    • (1991) Cell , vol.64 , pp. 615-623
    • Robbins, J.1    Dilworth, S.M.2    Laskey, R.A.3    Dingwall, C.4
  • 39
    • 0030297538 scopus 로고    scopus 로고
    • tRNA ligase required for regulated mRNA splicing in the unfolded protein response
    • Sidrauski, C., Cox, J.S., and Walter, P. (1996). tRNA ligase required for regulated mRNA splicing in the unfolded protein response. Cell 86, 405-413.
    • (1996) Cell , vol.86 , pp. 405-413
    • Sidrauski, C.1    Cox, J.S.2    Walter, P.3
  • 40
    • 0024669291 scopus 로고
    • A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in saccharomyces cerevisiae
    • Sikorski, R.S., and Hieter, P. (1989). A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19-27.
    • (1989) Genetics , vol.122 , pp. 19-27
    • Sikorski, R.S.1    Hieter, P.2
  • 42
    • 0025133312 scopus 로고
    • Recognition of exonintron boundaries by the Halobacterium volcanii tRNA intron endonuclease
    • Thompson, L.D., and Daniels, C.J. (1990). Recognition of exonintron boundaries by the Halobacterium volcanii tRNA intron endonuclease. J. Biol. Chem. 265, 18104-18111.
    • (1990) J. Biol. Chem. , vol.265 , pp. 18104-18111
    • Thompson, L.D.1    Daniels, C.J.2
  • 43
    • 0024279638 scopus 로고
    • trp intron endonuclease from Halobacterium volcanii: Unique substrate recognition properties
    • trp intron endonuclease from Halobacterium volcanii: unique substrate recognition properties. J. Biol. Chem. 263, 17951-17959.
    • (1988) J. Biol. Chem. , vol.263 , pp. 17951-17959
    • Thompson, L.D.1    Daniels, C.J.2
  • 44
    • 0029871347 scopus 로고    scopus 로고
    • PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in Saccharomyces cerevisiae
    • Wach, A. (1996). PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in Saccharomyces cerevisiae. Yeast 12, 259-265.
    • (1996) Yeast , vol.12 , pp. 259-265
    • Wach, A.1
  • 45
    • 0027476368 scopus 로고
    • Novel activity of a yeast ligase deletion polypeptide: Evidence for GTP-dependent tRNA splicing
    • Westaway, S.K., Belford, H.G., Apostol, B.L., Abelson, J., and Greer, C.L. (1993). Novel activity of a yeast ligase deletion polypeptide: evidence for GTP-dependent tRNA splicing. J. Biol. Chem. 268, 2435-2443.
    • (1993) J. Biol. Chem. , vol.268 , pp. 2435-2443
    • Westaway, S.K.1    Belford, H.G.2    Apostol, B.L.3    Abelson, J.4    Greer, C.L.5
  • 46
    • 0023834872 scopus 로고
    • Structure and function of the yeast tRNA ligase gene
    • Westaway, S.K., Phizicky, E.M., and Abelson, J. (1988). Structure and function of the yeast tRNA ligase gene. J. Biol. Chem. 263, 3171-3176.
    • (1988) J. Biol. Chem. , vol.263 , pp. 3171-3176
    • Westaway, S.K.1    Phizicky, E.M.2    Abelson, J.3
  • 47
    • 0023904031 scopus 로고
    • Mutations affecting the tRNA-splicing endonuclease activity of saccharomyces cerevisiae
    • Winey, M., and Culbertson, M.R. (1988). Mutations affecting the tRNA-splicing endonuclease activity of Saccharomyces cerevisiae. Genetics 118, 609-617.
    • (1988) Genetics , vol.118 , pp. 609-617
    • Winey, M.1    Culbertson, M.R.2
  • 48
    • 0024756421 scopus 로고
    • Split tRNA genes and their products: A paradigm for the study of cell-function and evolution
    • Winey, M., and Culbertson, M.R. (1989). Split tRNA genes and their products: a paradigm for the study of cell-function and evolution. Yeast 5, 405-427.
    • (1989) Yeast , vol.5 , pp. 405-427
    • Winey, M.1    Culbertson, M.R.2
  • 49
    • 0027327598 scopus 로고
    • Molecular cloning of 2 DNA-binding proteins of maize that are structurally different but interact with the same sequence motif
    • Yanagisawa, S., and Izui, K. (1993). Molecular cloning of 2 DNA-binding proteins of maize that are structurally different but interact with the same sequence motif. J. Biol. Chem. 268, 16028-16036.
    • (1993) J. Biol. Chem. , vol.268 , pp. 16028-16036
    • Yanagisawa, S.1    Izui, K.2


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