Polyadenylation of telomerase RNA in budding yeast

RNA

Volumn 3, Issue 11, 1997, Pages 1337-1351

  Chapon, Christine ^a   Cech, Thomas R ^a   Zaug, Arthur J ^a  

^a UNIVERSITY OF COLORADO   (United States)

Author keywords

Cell cycle regulation; Polyadenylation; Stable RNA; Telomerase RNA; Transcription

Indexed keywords

RNA; TELOMERASE;

ARTICLE; CELL CYCLE G1 PHASE; CELL CYCLE S PHASE; KLUYVEROMYCES; NONHUMAN; POLYADENYLATION; PRIORITY JOURNAL; PROMOTER REGION; RNA ANALYSIS; RNA STRUCTURE; RNA TRANSCRIPTION; SACCHAROMYCES CEREVISIAE;

BASE SEQUENCE; G1 PHASE; KLUYVEROMYCES; MOLECULAR SEQUENCE DATA; POLY A; RNA, FUNGAL; SACCHAROMYCES CEREVISIAE; TELOMERASE; TRANSCRIPTION, GENETIC;

KLUYVEROMYCES; KLUYVEROMYCES LACTIS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCETALES;

EID: 0030721677     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (79)

1. Avilion AA, Harrington LA, Greider CW. 1992. Tetrahymena telomerase RNA levels increase during macronuclear development. Dev Genet 13:80-86.
2. Baker EJ. 1993. Control of poly(A) length. In: Belasco JG, Brawerman G, eds. Control of messenger RNA stability. San Diego: Academic Press, Inc. Harcourt Brace Jovanovich. pp 367-415.
3. Baserga SJ, Steitz JA. 1993. The diverse world of small ribonucleoproteins. In: Gesteland RF, Atkins JF, eds. The RNA world. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press. pp 359-381.
4. Blackburn EH. 1993. Telomerase. In: Gesteland RF, Atkins JF, eds. The RNA world. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press. pp 557-576.
5. Blasco MA, Funk W, Villeponteau B, Greider CW. 1995. Functional characterization and developmental regulation of mouse telometase RNA. Science 269:1267-1270.
6. Blasco MA, Rizen M, Greider CW, Hanahan D. 1996. Differential regulation of telomerase activity and telomerase RNA during multi-stage tumorigenesis. Nature Genetics 12:200-204.
7. Bodnar AG, Kim NW, Effors RB, Chiu CP. 1996. Mechanism of telomerase induction during T cell activation. Exp Cell Res 228:58-64.
8. Broccoli AG, Godley LA, Donehower LA, Varmus HE, de Lange T. 1996. Telomerase activation in mouse mammary tumors: Lack of detectable telomere shortening and evidence for regulation of telomerase RNA with cell proliferation. Mol Cell Biol 16:3765-3772.
9. Brockdorff N, Ashworth A, Kay GF, McCabe VM, Norris DP, Cooper PJ, Swift S, Rastan S. 1992. The product of the mouse Xist gene is a 15 kb inactive X-specific transcript containing no conserved ORF and located in the nucleus. Cell 71:515-526.
10. Brown CJ, Hendrich BD, Rupert JL, Lafrenière RG, Xing Y, Lawrence J, Willard HF. 1992. The human XIST gene: Analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localizaed within the nucleus. Cell 71:527-542.
11. Buchkovich KJ, Greider CW. 1996. Telomerase regulation during entry into the cell cycle in normal human T cells. Mol Biol Cell 7:1443-1454.
12. Caponigro G, Parker R. 1996. Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae. Microbiol Rev 60:233-249.
13. Church GM, Gilbert W. 1984. Genomic sequencing. Proc Natl Acad Sci USA 81:1991-1995.
14. Clemson CM, McNeil JA, Willard HF, Lawrence JB. 1996. XIST RNA paints inactive X chromosome at interphase: Evidence for a novel RNA involoved in nuclear/chromosome structure. J Cell Biol 132:259-275.
15. Dahlberg JE, Lund E. 1988. The genes and transcription of the major small nuclear RNAs. In: Birnstiel MI., ed. Structure and function of the major and minor small nuclear ribonucleoprotein particles. Heidelberg, Germany: Springer-Verlag. pp 38-70.
16. de Lange T. 1994. Activation of telomerase in a human tumor. Proc Natl Acad Sci USA 91:2882-2885.
17. Dieci G, Hermann-Le Denmat S, Lukhtanov E, Thuriaux P, Werner M, Sentenac A. 1995. A universally conserved region of the largest subunit participates in the active site of RNA polymerase III. EMBO J 14:3766-3776.
18. Dou Wei Y, Collinge DB, Smedegaard-Petersen V, Thordal-Christensen H. 1996. Characterization of the transcript of a new class of retroposon-type repetitive element cloned from the powdery mildew fungus, Erysiphe graminis. Mol Gen Genet 250:477-482.
19. Eckner R, Ellmeier W, Birnstiel ML. 1991. Mature mRNA 3′ end formation stimulates RNA export from the nucleus. EMBO J 10:3513-3522.
20. Fang G, Cech TR. 1995. Telomerase RNA localized in the replication band and spherical subnuclear organelles in hypotrichous ciliates. J Cell Biol 130:243-253.
21. Feng J, Funk WD, Wang SS, Weinrich SL, Avilion AA, Chiu CP, Adams RR, Chang E, Allsopp RC, Yu J, Le S, West MD, Harley CB, Andrews WH, Greider CW, Villeponteau B. 1995. The RNA component of human telomerase. Science 269:1236-1241.
22. Futcher B. 1993. Analysis of the cell cycle in Saccharomyces cerevisiae. In: Fantes P, ed. The cell cycle. A practical approach. Oxford: IRL Press. pp 69-92.
23. Gall JG. 1991. Spliceosomes and snurposomes. Science 252:1499-1500.
24. Gellie DR. 1991. The cap and poly(A) tail function synergistically to regulate mRNA translational efficiency. Genes & Dev 5:2108-2116.
25. Geiduschek EP, Tocchini-Valentini GP. 1988. Transcription by RNA polymerase III. Annu Rev Biochem 57:873-914.
26. Greider CW. 1996. Telomere length regulation. Annu Rev Biochem 65:337-365.
27. Greider CW, Blackburn EH. 1989. A telomeric sequence in the RNA of Tetrahymena telomerase required for telomere repeat synthesis. Nature 337:331-337.
28. Guo Z, Russo P, Yun DF, Butler JS, Sherman F. 1995. Redundant 3′-end-forming signals for the yeast CYCI mRNA. Proc Natl Acad Sci 92:4211-4214.
29. Guo Z, Sherman F. 1996. 3′-End-forming signals of yeast mRNA. Trends Biochem Sci 21:477-481.
30. Guthrie C, Patterson B. 1988. Spliceosomal snRNAs. Annu Rev Genet 22:387-419.
31. Hahn S, Hoar ET, Guarente L. 1985. Each of there "TATA elements" specifies a subset of the transcription initiation sites at the CYC-1 promoter of Saccharomyces cerevisiae. Proc Natl Acad Sci USA 82:8562-8566.
32. Heidmann S, Obermaier B, Vogel K, Domdey H. 1992. Identification of pre-mRNA polyadenylation sites in Saccharomyces cerevisiae. Mol Cell Biol 12:4215-4229.
33. Hogan NC, Traverse KL, Sullivan DE, Pardue ML. 1994. The nucleuslimited Hsr-omega-n transcript is a polyadenylated RNA with a regulated intranuclear turnover. J Cell Biol 125:21-30.
34. Holt SE, Wright WE, Shay JW. 1997. Multiple pathways for the regulation of telomerase activity. Eur J Cancer 33:761-766.
35. Huang Y, Carmichael GG. 1996. Role of polyadenylation in nucleocytoplasmic transport of mRNA. Mol Cell Biol 16:1534-1542.
36. Izaurralde E, Mattaj IW. 1995. RNA export. Cell 81:153-159.
37. Jacobson A, Peltz SW. 1996. Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells. Annu Rev Biochem 65:693-739.
38. Köhrer K, Domdey H. 1991. Preparation of high molecular weight RNA. Mathods Enzymol 194:398-405.
39. Kretzner L, Rymond BC, Rosbash M. 1987. S. cerevisiae U1 RNA is large and has limited primary sequence homology to metazoan U1 snRNA. Cell 50:593-602.
40. Lamond AI, Carmo-Fonseca M. 1993. The coiled body. Trends Cell Biol 3:198-204.
41. Liang S, Briggs MW, Butler JS. 1997. Regulation of tRNA suppressor activity by an intron-encoded polyadenylation signal. RNA 3:648-659.
42. Lingner J, Hendrick LL, Cech TR. 1994. Telomerase RNAs of different ciliates have a common secondary structure and a permuted template. Genes & Dev 8:1984-1998.
43. Lingner J. Hughes TR, Shevchenko A, Mann M, Lundblad V, Cech TR. 1997. Reverse transcriptase motifs in the catalytic subunit of telomerase. Science 276:561-567.
44. Lingner J, Radtke I, Wahle E, Keller W. 1991. Purification and characterization of poly(A) polymerase from Saccharomyces cerevisiae. J Biol Chem 266:8741-8746.
45. Lührmann R, Kastner B, Bach M. 1990. Structure of spliceosomal snRNPs and their role in pre-mRNA splicing. Biochim Biophys Acta 1087:265-292.
46. Lundblad V, Wright WE. 1996. Telomeres and telomerase: A simple picture becomes complex. Cell 87:369-375.
47. Mangin M, Ares M Jr, Weiner AM. 1985. U1 small nuclear RNA genes are subjected to dosage compensation in mouse cells. Science 229:272-275.
48. McEachern MJ, Blackburn EH. 1995. Runaway telomere elongation caused by telomerase RNA gene mutations. Nature 376:403-409.
49. McCormick-Graham M, Romero DP. 1995. Ciliate telomerase RNA structural features. Nucleic Acids Res 23:1091-1097.
50. McCormick-Graham M, Romero DP. 1996. A single telomerase RNA is sufficient for the synthesis of variable telomeric DNA repeats in ciliates of the genus Paramecium. Mol Cell Biol 16:1871-1879.
51. McKinney JD, Chang F. Heintz N, Cross FR. 1993. Nagative regulation of FAR1 at the start of the yeast cell cycle. Genes & Dev 7:833-843.
52. Melek M, Davis BT, Shippen DE. 1994. Oligonucleotides complementary to the Oxytricha nova telomerase RNA delineate the template domain and uncover a novel mode of primer utilization. Mol Cell Biol 14:7827-7838.
53. Minvielle-Sebastia L, Preker PJ, Keller W. 1994. RNA14 and RNA15 proteins as components of a yeast pre-mRNA 3′-end processing factor. Science 266:1702-1705.
54. Minvielle-Sebastia L, Winsor B, Bonneaud N, Lacroute F. 1991. Mutations in the yeast RNA14 and RNA15 genes result in an abnormal mRNA decay rate; sequence analysis reveals and RNA-binding domain in the RNA15 protein. Mol Cell Biol 11:3075-3087.
55. Neuman de Vegvar HE, Dahlberg JE. 1990. Nucleocytoplasmic transport and processing of small nuclear RNA precursors. Mol Cell Biol 10:3365-3375.
56. Noble SM, Guthrie C. 1996. Transcriptional pulse-chase analysis reveals a role for a novel snRNP-associated protein in the manufacture of spliceosomal snRNPs. EMBO J 15:4368-4379.
57. Nonet M, Scafe C, Sexton J, Young R. 1987. Eucaryotic RNA polymerase conditional mutant that rapidly ceases mRNA synthesis. Mol Cell Biol 7:1602-1611.
58. Parry HD, Scherly D, Mattaj IW. 1989. "Snurpogenesis:" The components and assembly of U snRNP components. Trends Biochem Sci 14:15-19.
59. Peltz SW, Jacobson A. 1993. mRNA turnover in Saccharomyces cerevisiae. In: Belasco JG, Brawerman G, eds. Control of messenger RNA stability. San Diego: Academic Press, Inc. Harcount Brace Jovanovich. pp 291-328.
60. Price CM, Adams AK, Vermeesch JR. 1994. Accumulation of telomerase RNA and telomere protein transcripts during telomere synthesis in Euplotes. J Euk Microbiol 41:267-275.
61. Romero DP, Blackburn EH. 1991. A conserved secondary structure for telomerase RNA. Cell 67:343-353.
62. Rose MD, Winston F, Hieter P. 1990. In: Methods in yeast genetics. A laboratory manual. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press. pp 177-186.
63. Schiestl RH, Gietz RD. 1989. High efficiency transformation of intact yeast cells using single stranded nucleic acids as carrier. Curr Genet 16:339-346.
64. Shippen-Lentz D, Blackburn EH. 1990. Functional evidence for an RNA template in telomerase. Science 247:546-552.
65. Shulman RW, Warner JR. 1978. Ribosomal RNA transcription in a mutant of Saccharomyces cerevisiae defective in ribosomal protein synthesis. Mol Gen Genet 161:221-223.
66. Siliciano PG, Haltiner Jones M, Guthrie C. 1987. Saccharomyces cerevisiae has a U1-like small nuclear RNA with unexpected properties. Science 237:1484-1487.
67. Singer MS, Gottschling DE. 1994. TLC1: Template RNA component of Saccharomyces cerevisiae telomerase. Science 266:404-409.
68. Spector DL. 1993. Macromolecular domains within the cell nucleus. Annu Rev Cell Biol 9:265-315.
69. Stone EM, Pillus L. 1996. Activation of an MAP kinase cascade leads to Sir3p hyperphosphorylation and strengthens transcriptional silencing. J Cell Biol 135:571-583.
70. Stutz F, Liao XC, Rosbash M. 1993. U1 small nuclear ribonucleprotein particle-protein interactions are revealed in Saccharomyces cerevisiae by in vivo competition assays. Mol Cell Biol 13:2126-2133.
71. Tarun SZ, Sachs AB. 1995. A common function for mRNA 5′ and 3′ ends in translation initiation in yeast. Genes & Dev 9:2997-3007.
72. Terns MP, Lund E, Dehlberg JE. 1993. A pre-export U1 snRNP in Xenopus laevis oocyte nuclei. Nucleic Acids Res 21:4569-4573.
73. Tranguch AJ, Engelke DR. 1993. RNase P RNAs from yeast. J Biol Chem 268:14045-14055.
74. Weng NP, Levine BL, June CH, Hodes RJ. 1996. Regulated expression of telomerase activity in human T lymphocyte development and activation. J Exp Med 183:2471-2479.
75. Xu F, Lin-Chao S, Cohen SN, 1993. The Escherichia coli pcnB gene promotes adenylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates. Proc Natl Acad Sci 90:6756-6760.
76. Yu GL, Bradley JD, Attardi LD, Blackburn EH. 1990. In vivo alteration of telomere sequences and senescence caused by mutated Tetrahymena telomerase RNAs. Nature 344:126-132.
77. Zakian VA. 1996. Structure, function, and replication of Saccharomyces cerevisiae telomeres. Annu Rev Genet 30:141-172.
78. Zaug AJ, Cech TR. 1995. Analysis of the structure of Tetrahymena nuclear RNAs in vivo: Telomerase RNA, the self-splicing rRNA intron, and U2 snRNA. RNA 1:363-374.
79. Zaug AJ, Lingner J, Cech TR. 1996. Method for determining RNA 3′ ends and application to human telomerase RNA. Nucleic Acids Res 24:532-533.