Trp86 → Phe replacement in bacteriorhodopsin affects a water molecule near Asp85 and light adaptation

Biochemistry

Volumn 36, Issue 18, 1997, Pages 5493-5498

  Hatanaka, Minoru ^a   Kashima, Ryuji ^a   Kandori, Hideki ^a   Friedman, Noga ^b   Sheves, Mordechai ^b   Needleman, Richard ^c   Lanyi, Janos K ^d   Maeda, Akio ^a  

^a KYOTO UNIVERSITY   (Japan)

^b WEIZMANN INSTITUTE OF SCIENCE   (Israel)

^c WAYNE STATE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^d UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIORHODOPSIN; PROTON PUMP; WATER; ASPARTIC ACID; PHENYLALANINE; RETINAL; TRYPTOPHAN;

AMINO ACID SUBSTITUTION; ARTICLE; CHROMATOPHORE; ISOMERISM; LIGHT ADAPTATION; NONHUMAN; PRIORITY JOURNAL; RETINA; CHEMISTRY; GENETICS; HALOBACTERIUM; INFRARED SPECTROSCOPY; LIGHT; METABOLISM; MUTATION; PHOTOCHEMISTRY; PHYSIOLOGY; PROTEIN BINDING;

ASPARTIC ACID; BACTERIORHODOPSINS; HALOBACTERIUM; LIGHT; MUTATION; PHENYLALANINE; PHOTOCHEMISTRY; PROTEIN BINDING; RETINALDEHYDE; SPECTROSCOPY, FOURIER TRANSFORM INFRARED; TRYPTOPHAN; WATER;

EID: 0030610908     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi970081k     Document Type: Article

References (41)

1. Aton, B., Doukas, A. G., Callender, R. H., Becher, B., & Ebrey, T. G. (1977) Biochemistry 16, 2995-2999.
2. Balashov, S. P., Govindjee, R., Kono, M., Imasheva, E. S., Lukashev, E., Ebrey, T. G., Crouch, R. K., Menick, D. R., & Feng, Y. (1993) Biochemistry 32, 10331-10343.
3. Balashov, S. P., Govindjee, R., Imasheva, E. S., Misra, S., Ebrey, T. G., Feng, Y., Crouch, R. K., & Menick, D. R. (1995) Biochemistry 34, 8820-8834.
4. Brown, L. S., Sasaki, J., Kandori, H., Maeda, A., Needleman, R., & Lanyi, J. K. (1995) J. Biol. Chem. 270, 27122-27126.
5. Casadio, R., & Stoeckenius, W. (1980) Biochemistry 19, 3374-3381.
6. Chang, C.-H., Liu, S.-Y., Jonas, R., & Govindjee, R. (1987) Biophys. J. 52, 617-623.
7. de Groot, H. J. M., Harbison, G. S., Herzfeld, J., & Griffin, R. G. (1989) Biochemistry 28, 3346-3353.
8. Dencher, N. A., Kohl, K. D., & Heyn, M. P. (1983) Biochemistry 22, 1323-1334.
9. Fischer, W. B., Sonar, S., Marti, T., Khorana, H. G., & Rothschild, K. J. (1994) Biochemistry 33, 12757-12762.
10. Fordor, S. P. A., Ames, J. B., Gebhard, R., van den Berg, E. M. M., Stoeckenius, W., Lugtenburg, J., & Mathies, R. A. (1988) Biochemistry 27, 7097-7101.
11. Friedman, N., Sheves, M., & Ottolenghi, M. (1989) J. Am. Chem. Soc. 111, 3203-3211.
12. Gärtner, W., Towner, P., Hopf, H., & Oesterhelt, D. (1983) Biochemistry 22, 2637-2644.
13. Govindjee, R., Kono, M., Balashov, S. P., Imasheva, E., Sheves, M., & Ebrey, T. G. (1995) Biochemistry 34, 4828-4838.
14. Grigorieff, N., Ceska, T. A., Downing, K. H., Baldwin, J. M., & Henderson, R. (1996) J. Mol. Biol. 259, 393-421.
15. Harbison, G. S., Smith, S. O., Pardoen, J. A., Winkel, C., Lugtenburg, J., Herzfeld, J., Mathies, R., & Griffin, R. G. (1984) Proc. Natl. Acad. Sci. U.S.A. 81, 1706-1709.
16. Hatanaka, M., Sasaki, J., Kandori, H., Ebrey, T. G., Needleman, R., Lanyi, J. K., & Maeda, A. (1996) Biochemistry 35, 6308-6312.
17. Henderson, R., Baldwin, J. M., Ceska, T. A., Zemlin, F., Beckman, E., & Downing, K. H. (1990) J. Mol. Biol. 213, 899-929.
18. Humphrey, W., Logunov, I., Schulten, K., & Sheves, M. (1994) Biochemistry 33, 3668-3678.
19. Kandori, H., Yamazaki, Y., Sasaki, J., Needleman, R., Lanyi, J. K., & Maeda, A. (1995) J. Am. Chem. Soc. 117, 2118-2119.
20. Kouyama, T., Bogomolni, R. A., & Stoeckenius, W. (1985) Biophys. J. 48, 201-208.
21. Livnah, N., & Sheves, M. (1993) Biochemistry 32, 7223-7228.
22. Lozier, R. H., Bogomolni, R. A., & Stoeckenius, W. (1975) Biophys. J. 15, 955-962.
23. Lugtenburg, J. (1985) Pure Appl. Chem. 57, 759-762.
24. Maeda, A., Iwasa, T., & Yoshizawa, T. (1980) Biochemistry 19, 3825-3831.
25. Maeda, A., Sasaki, J., Pfefferlé, J.-M., Shichida, Y., & Yoshizawa, T. (1991) Photochem. Photobiol. 54, 911-921.
26. Maeda, A., Sasaki, J., Shichida, Y., & Yoshizawa, T. (1992) Biochemistry 31, 462-467.
27. Maeda, A., Sasaki, J., Yamazaki, Y., Needleman, R., & Lanyi, J. K. (1994) Biochemistry 33, 1713-1717.
28. Mogi, T., Marti, T., & Khorana, H. G. (1989) J. Biol. Chem. 264, 14197-14201.
29. Needleman, R., Chang, M., Ni, B., Váró, G., Fornes, J., White, S. H., & Lanyi, J. K. (1991) J. Biol. Chem. 266, 11478-11484.
30. Oesterhelt, D., & Stoeckenius, W. (1974) Methods Enzymol. 31, 667-678.
31. Roepe, P., Gray, J., Lugtenburg, J., van den Berg, E. M. M., Herzfeld, J., & Rothschild, K. J. (1988) J. Am. Chem. Soc. 110, 7223-7224.
32. Rothschild, K. J., Gray, D., Mogi, T., Marti, T., Braiman, M. S., Stern, L. J., & Khorana, H. G. (1989) Biochemistry 28, 7052-7059.
33. Scherrer, P., Mathew, M. K., Sperling, W., & Stoeckenius, W. (1989) Biochemistry 28, 829-834.
34. Smith, S. O., Myers, A. B., Pardoen, J. A., Winkel, C., Mulder, P. P. J., Lugtenburg, J., & Mathies, R. A. (1984) Proc. Natl. Acad. Sci. U.S.A. 81, 2055-2059.
35. Smith, S. O., Pardoen, J. A., Lugtenburg, J., & Mathies, R. A. (1987) J. Phys. Chem. 91, 804-819.
36. Soppa, J., Otomo, J., Straub, J., Tittor, J., Meessen, S., & Oesterhelt, D. (1989) J. Biol. Chem. 264, 13049-13056.
37. Steinberg, G., Friedman, N., Sheves, M., & Ottolenghi, M. (1991) Photochem. Photobiol. 54, 969-976.
38. Tittor, J., Schweiger, U., Oesterhelt, D., & Bamberg, E. (1994) Biophys. J. 67, 1682-1690.
39. Towner, P., Gärtner, W., Walckhoff, B., Oesterhelt, D., & Hopf, H. (1980) FEBS Lett. 117, 363-367.
40. Weidlich, O., Schalt, B., Friedman, N., Sheves, M., Lanyi, J. K., Brown, L. S., & Siebert, F. (1996) Biochemistry 35, 10807-10814.
41. Yamazaki, Y., Sasaki, J., Hatanaka, M., Kandori, H., Maeda, A., Needleman, R., Shinada, T., Yoshihara, K., Brown, L. S., & Lanyi, J. K. (1995) Biochemistry 34, 577-582.