메뉴 건너뛰기




Volumn 264, Issue 5, 1996, Pages 878-890

Interactions between RuvA and RuvC at Holliday junctions: Inhibition of junction cleavage and formation of a RuvA-RuvC-DNA complex

Author keywords

Branch migration; DNA repair; Recombination

Indexed keywords

BACTERIAL ENZYME; MAGNESIUM ION;

EID: 0030596061     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1996.0684     Document Type: Article
Times cited : (74)

References (49)
  • 1
    • 0030575805 scopus 로고    scopus 로고
    • Bypass of DNA heterologies during RuvAB-mediated three- and four-strand branch migration
    • Adams, D. E. & West, S. C. (1996). Bypass of DNA heterologies during RuvAB-mediated three- and four-strand branch migration. J. Mol. Biol. 263, 582-596.
    • (1996) J. Mol. Biol. , vol.263 , pp. 582-596
    • Adams, D.E.1    West, S.C.2
  • 2
    • 0028043495 scopus 로고
    • Dissociation of RecA filaments from duplex DNA by the RuvA and RuvB DNA repair proteins
    • Adams, D. E., Tsaneva, I. R. & West, S. C. (1994). Dissociation of RecA filaments from duplex DNA by the RuvA and RuvB DNA repair proteins. Proc. Natl Acad. Sci. USA, 91, 9901-9905.
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 9901-9905
    • Adams, D.E.1    Tsaneva, I.R.2    West, S.C.3
  • 3
    • 0028120546 scopus 로고
    • Atomic structure of the RuvC resolvase: A Holliday junction-specific endonuclease from E. coli
    • Ariyoshi, M., Vassylyev, D. G., Iwasaki, H., Nakamura, H., Shinagawa, H. & Morikawa, K. (1994). Atomic structure of the RuvC resolvase: a Holliday junction-specific endonuclease from E. coli. Cell, 78, 1063-1072.
    • (1994) Cell , vol.78 , pp. 1063-1072
    • Ariyoshi, M.1    Vassylyev, D.G.2    Iwasaki, H.3    Nakamura, H.4    Shinagawa, H.5    Morikawa, K.6
  • 4
    • 0029018205 scopus 로고
    • RuvC protein resolves Holliday junctions via cleavage of the continuous (non-crossover) strands
    • Bennett, R. J. & West, S. C. (1995a). RuvC protein resolves Holliday junctions via cleavage of the continuous (non-crossover) strands. Proc. Natl Acad. Sci. USA, 92, 5635-5639.
    • (1995) Proc. Natl Acad. Sci. USA , vol.92 , pp. 5635-5639
    • Bennett, R.J.1    West, S.C.2
  • 5
    • 0029087265 scopus 로고
    • Structural analysis of the RuvC-Holliday junction complex reveals an unfolded junction
    • Bennett, R. J. & West, S. C. (1995b). Structural analysis of the RuvC-Holliday junction complex reveals an unfolded junction. J. Mol. Biol. 252, 213-226.
    • (1995) J. Mol. Biol. , vol.252 , pp. 213-226
    • Bennett, R.J.1    West, S.C.2
  • 6
    • 0027376095 scopus 로고
    • Resolution of Holliday junctions by RuvC resolvase: Cleavage specificity and DNA distortion
    • Bennett, R. J., Dunderdale, H, J. & West, S. C. (1993). Resolution of Holliday junctions by RuvC resolvase: cleavage specificity and DNA distortion. Cell, 74, 1021-1031.
    • (1993) Cell , vol.74 , pp. 1021-1031
    • Bennett, R.J.1    Dunderdale, H.J.2    West, S.C.3
  • 7
    • 0028050328 scopus 로고
    • Substrate specificity of the Escherichia coli RuvC protein
    • Benson, F. E. & West, S. C. (1994). Substrate specificity of the Escherichia coli RuvC protein. J. Biol. Chem. 269, 5195-5201.
    • (1994) J. Biol. Chem. , vol.269 , pp. 5195-5201
    • Benson, F.E.1    West, S.C.2
  • 8
    • 0024296285 scopus 로고
    • Nucleotide sequencing of the ruv region of Escherichia coli K-12 reveals a LexA regulated operon encoding two genes
    • Benson F. E., Illing, G. T., Sharples, G. J. & Lloyd, R. G. (1988). Nucleotide sequencing of the ruv region of Escherichia coli K-12 reveals a LexA regulated operon encoding two genes. Nucl. Acids Res. 16, 1541-1549.
    • (1988) Nucl. Acids Res. , vol.16 , pp. 1541-1549
    • Benson, F.E.1    Illing, G.T.2    Sharples, G.J.3    Lloyd, R.G.4
  • 9
    • 0025248057 scopus 로고
    • The three-way junction is a Y-shaped molecule in which there is no helix-helix stacking
    • Duckett, D. R. & Lilley, D. M. J. (1990). The three-way junction is a Y-shaped molecule in which there is no helix-helix stacking. EMBO J. 9, 1659-1664.
    • (1990) EMBO J. , vol.9 , pp. 1659-1664
    • Duckett, D.R.1    Lilley, D.M.J.2
  • 10
    • 0025125851 scopus 로고
    • The role of metal ions in the conformation of the four-way junction
    • Duckett, D. R., Murchie, A. I. H. & Lilley, D. M. J. (1990). The role of metal ions in the conformation of the four-way junction. EMBO J. 9, 583-590.
    • (1990) EMBO J. , vol.9 , pp. 583-590
    • Duckett, D.R.1    Murchie, A.I.H.2    Lilley, D.M.J.3
  • 11
    • 0026331068 scopus 로고
    • Formation and resolution of recombination intermediates by E. coli RecA and RuvC proteins
    • Dunderdale, H. J., Benson, F. E., Parsons, C. A., Sharples, G. J., Lloyd, R. G. & West, S. C. (1991). Formation and resolution of recombination intermediates by E. coli RecA and RuvC proteins. Nature, 354, 506-510.
    • (1991) Nature , vol.354 , pp. 506-510
    • Dunderdale, H.J.1    Benson, F.E.2    Parsons, C.A.3    Sharples, G.J.4    Lloyd, R.G.5    West, S.C.6
  • 12
    • 0028050325 scopus 로고
    • Cloning, overexpression, purification and characterization of the Escherichia coli RuvC Holliday junction resolvase
    • Dunderdale, H. J., Sharples, G. J., Lloyd, R. G. & West, S. C. (1994). Cloning, overexpression, purification and characterization of the Escherichia coli RuvC Holliday junction resolvase. J. Biol. Chem. 269, 5187-5194.
    • (1994) J. Biol. Chem. , vol.269 , pp. 5187-5194
    • Dunderdale, H.J.1    Sharples, G.J.2    Lloyd, R.G.3    West, S.C.4
  • 13
    • 84959678845 scopus 로고
    • A mechanism for gene conversion in fungi
    • Holliday, R. (1964). A mechanism for gene conversion in fungi. Genet. Res. Camb. 5, 282-304.
    • (1964) Genet. Res. Camb. , vol.5 , pp. 282-304
    • Holliday, R.1
  • 14
    • 0026064725 scopus 로고
    • E. coli RuvC protein is an endonuclease that resolves the Holliday structure, an intermediate of homologous recombination
    • Iwasaki, H., Takahagi, M., Shiba, T., Nakata, A. & Shinagawa, H. (1991). E. coli RuvC protein is an endonuclease that resolves the Holliday structure, an intermediate of homologous recombination. EMBO J. 10, 4381-4389.
    • (1991) EMBO J. , vol.10 , pp. 4381-4389
    • Iwasaki, H.1    Takahagi, M.2    Shiba, T.3    Nakata, A.4    Shinagawa, H.5
  • 15
    • 0028067935 scopus 로고
    • RuvA and RuvB proteins facilitate the bypass of heterologous DNA insertions during RecA protein-mediated DNA strand exchange
    • Iype, L. E., Wood, E. A., Inman, R. B. & Cox, M. M. (1994). RuvA and RuvB proteins facilitate the bypass of heterologous DNA insertions during RecA protein-mediated DNA strand exchange. J. Biol. Chem. 269, 24967-24978.
    • (1994) J. Biol. Chem. , vol.269 , pp. 24967-24978
    • Iype, L.E.1    Wood, E.A.2    Inman, R.B.3    Cox, M.M.4
  • 18
    • 0026009412 scopus 로고
    • Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG
    • Lloyd, R. G. (1991). Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG. J. Bacteriol. 173, 5414-5418.
    • (1991) J. Bacteriol. , vol.173 , pp. 5414-5418
    • Lloyd, R.G.1
  • 19
    • 0025924538 scopus 로고
    • Genetic analysis of the recG locus of Escherichia coli K-12 and of its role in recombination and DNA repair
    • Lloyd, R. G. & Buckman, C. (1991). Genetic analysis of the recG locus of Escherichia coli K-12 and of its role in recombination and DNA repair. J. Bacteriol. 173, 1004-1011.
    • (1991) J. Bacteriol. , vol.173 , pp. 1004-1011
    • Lloyd, R.G.1    Buckman, C.2
  • 20
    • 0000349496 scopus 로고    scopus 로고
    • Homologous recombinationular biology
    • (Neidhardt, F. C., Curtiss, R., III, Ingraham, J. L., Lin, E. C. C., Low, K. B., Magasanik, B., Reznikoff, W. S., Riley, M., Schaechter, M. & Umbarger, H. E., eds), 2nd edit., ASM Press, Washington, DC
    • Lloyd, R. G. & Low, K. B. (1996). Homologous recombination. In Escherichia coli and Salmonella Cellular and Molecular Biology (Neidhardt, F. C., Curtiss, R., III, Ingraham, J. L., Lin, E. C. C., Low, K. B., Magasanik, B., Reznikoff, W. S., Riley, M., Schaechter, M. & Umbarger, H. E., eds), 2nd edit., pp. 2236-2255, ASM Press, Washington, DC.
    • (1996) Escherichia Coli and Salmonella Cellular and Molecular Biology , pp. 2236-2255
    • Lloyd, R.G.1    Low, K.B.2
  • 21
    • 0027397630 scopus 로고
    • Dissociation of synthetic Holliday junctions by E. coli RecG protein
    • Lloyd, R. G. & Sharples, G. J. (1993). Dissociation of synthetic Holliday junctions by E. coli RecG protein. EMBO J. 12, 17-22.
    • (1993) EMBO J. , vol.12 , pp. 17-22
    • Lloyd, R.G.1    Sharples, G.J.2
  • 22
    • 0021223652 scopus 로고
    • Effect of ruv mutations on recombination and DNA repair in Escherichia coli K12
    • Lloyd, R. G., Benson, F. E. & Shurvinton, C. E. (1984). Effect of ruv mutations on recombination and DNA repair in Escherichia coli K12. Mol. Gen. Genet. 194, 303-309.
    • (1984) Mol. Gen. Genet. , vol.194 , pp. 303-309
    • Lloyd, R.G.1    Benson, F.E.2    Shurvinton, C.E.3
  • 23
    • 0029871788 scopus 로고    scopus 로고
    • Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82
    • Mahdi, A. A., Sharples, G. J., Mandal, T. N. & Lloyd, R. G. (1996). Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82. J. Mol. Biol. 257, 561-573.
    • (1996) J. Mol. Biol. , vol.257 , pp. 561-573
    • Mahdi, A.A.1    Sharples, G.J.2    Mandal, T.N.3    Lloyd, R.G.4
  • 24
    • 0027236687 scopus 로고
    • Resolution of Holliday intermediates in recombination and DNA repair: Indirect suppression of ruvA, ruvB and ruvC mutations
    • Mandal, T. N., Mahdi, A. A., Sharples, G. J. & Lloyd, R. G. (1993). Resolution of Holliday intermediates in recombination and DNA repair: indirect suppression of ruvA, ruvB and ruvC mutations. J. Bacteriol. 175, 4325-4334.
    • (1993) J. Bacteriol. , vol.175 , pp. 4325-4334
    • Mandal, T.N.1    Mahdi, A.A.2    Sharples, G.J.3    Lloyd, R.G.4
  • 25
    • 0028170790 scopus 로고
    • Hexameric rings of E. Coli RuvB protein: Cooperative assembly, processivity, and ATPase activity
    • Mitchell, A. H. & West, S. C. (1994). Hexameric rings of E. coli RuvB protein: Cooperative assembly, processivity, and ATPase activity. J. Mol. Biol. 243, 208-215.
    • (1994) J. Mol. Biol. , vol.243 , pp. 208-215
    • Mitchell, A.H.1    West, S.C.2
  • 26
    • 0027261464 scopus 로고
    • Formation of a RuvAB-Holliday junction complex in vitro
    • Parsons, C. A. & West, S. C. (1993). Formation of a RuvAB-Holliday junction complex in vitro. J. Mol. Biol. 232, 397-405.
    • (1993) J. Mol. Biol. , vol.232 , pp. 397-405
    • Parsons, C.A.1    West, S.C.2
  • 27
    • 0025359444 scopus 로고
    • Interaction of a four-way junction in DNA with T4 endonuclease VII
    • Parsons, C. A., Kemper, B. & West, S. C. (1990). Interaction of a four-way junction in DNA with T4 endonuclease VII. J. Biol. Chem. 265, 9285-9289.
    • (1990) J. Biol. Chem. , vol.265 , pp. 9285-9289
    • Parsons, C.A.1    Kemper, B.2    West, S.C.3
  • 28
    • 0026741832 scopus 로고
    • Interaction of E. coli RuvA and RuvB proteins with synthetic Holliday junctions
    • Parsons, C. A., Tsaneva, I., Lloyd, R. G. & West, S. C. (1992). Interaction of E. coli RuvA and RuvB proteins with synthetic Holliday junctions. Proc. Natl. Acad. Sci. USA, 89, 5452-5456.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 5452-5456
    • Parsons, C.A.1    Tsaneva, I.2    Lloyd, R.G.3    West, S.C.4
  • 29
    • 0028968305 scopus 로고
    • Structure of a multisubunit complex that promotes DNA branch migration
    • Parsons, C. A., Stasiak, A., Bennett, R. J. & West, S. C. (1995a). Structure of a multisubunit complex that promotes DNA branch migration. Nature, 374, 375-378.
    • (1995) Nature , vol.374 , pp. 375-378
    • Parsons, C.A.1    Stasiak, A.2    Bennett, R.J.3    West, S.C.4
  • 30
    • 0028788048 scopus 로고
    • The E. coli RuvAB proteins branch migrate Holliday junctions through heterologous DNA sequences in a reaction facilitated by SSB
    • Parsons, C. A., Stasiak, A. & West, S. C. (1995b). The E. coli RuvAB proteins branch migrate holliday junctions through heterologous DNA sequences in a reaction facilitated by SSB. EMBO J. 14, 5736-5744.
    • (1995) EMBO J. , vol.14 , pp. 5736-5744
    • Parsons, C.A.1    Stasiak, A.2    West, S.C.3
  • 32
    • 0029142820 scopus 로고
    • Identification of four acidic amino acids that constitute the catalytic center of the RuvC Holliday junction resolvase
    • Saito, A., Iwasaki, H., Ariyoshi, M., Morikawa, K. & Shinagawa, H. (1995). Identification of four acidic amino acids that constitute the catalytic center of the RuvC Holliday junction resolvase. Proc. Natl Acad. Sci. USA, 92, 7470-7474.
    • (1995) Proc. Natl Acad. Sci. USA , vol.92 , pp. 7470-7474
    • Saito, A.1    Iwasaki, H.2    Ariyoshi, M.3    Morikawa, K.4    Shinagawa, H.5
  • 33
    • 0028043346 scopus 로고
    • Genetic recombination in E. coli: RuvC protein cleaves Holliday junctions at resolution hotspots in vitro
    • Shah, R., Bennet, R. J. & West, S. C. (1994a). Genetic recombination in E. coli: RuvC protein cleaves Holliday junctions at resolution hotspots in vitro. Cell, 79, 853-864.
    • (1994) Cell , vol.79 , pp. 853-864
    • Shah, R.1    Bennet, R.J.2    West, S.C.3
  • 34
    • 0028272139 scopus 로고
    • Activation of RuvC Holliday junction resolvase in vitro
    • Shah, R., Bennett, R. J. & West, S. C. (1994b). Activation of RuvC Holliday junction resolvase in vitro. Nucl. Acids Res. 22, 2490-2497.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 2490-2497
    • Shah, R.1    Bennett, R.J.2    West, S.C.3
  • 35
    • 0025720560 scopus 로고
    • Resolution of Holliday junctions in Escherichia coli: Identification of the ruvC gene product as a 19-Kilodalton protein
    • Sharples, G. J. & Lloyd, R. G. (1991). Resolution of Holliday junctions in Escherichia coli: Identification of the ruvC gene product as a 19-Kilodalton protein. J. Bacteriol. 173, 7711-7715.
    • (1991) J. Bacteriol. , vol.173 , pp. 7711-7715
    • Sharples, G.J.1    Lloyd, R.G.2
  • 36
    • 0025332556 scopus 로고
    • Molecular and functional analysis of the ruv region of Escherichia coli K-12 reveals three genes involved in DNA repair and recombination
    • Sharples, G. J., Benson, F. E., Illing, G. T. & Lloyd, R. G. (1990). Molecular and functional analysis of the ruv region of Escherichia coli K-12 reveals three genes involved in DNA repair and recombination. Mol. Gen. Genet. 221, 219-226.
    • (1990) Mol. Gen. Genet. , vol.221 , pp. 219-226
    • Sharples, G.J.1    Benson, F.E.2    Illing, G.T.3    Lloyd, R.G.4
  • 37
    • 0028590083 scopus 로고
    • Processing of intermediates in recombination and DNA repair: Identification of a new endonuclease that specifically cleaves Holliday junctions
    • Sharples, G. J., Chan, S. C., Mahdi, A. A., Whitby, M. C. & Lloyd, R. G. (1994a). Processing of intermediates in recombination and DNA repair: identification of a new endonuclease that specifically cleaves Holliday junctions. EMBO J. 13, 6133-6142.
    • (1994) EMBO J. , vol.13 , pp. 6133-6142
    • Sharples, G.J.1    Chan, S.C.2    Mahdi, A.A.3    Whitby, M.C.4    Lloyd, R.G.5
  • 38
    • 0028224716 scopus 로고
    • A mutation in helicase motif III of E. coli RecG protein abolishes branch migration of Holliday junctions
    • Sharples, G. J., Whitby, M. C., Ryder, L. & Lloyd, R. G. (1994b). A mutation in helicase motif III of E. coli RecG protein abolishes branch migration of Holliday junctions. Nucl. Acids Res. 22, 308-313.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 308-313
    • Sharples, G.J.1    Whitby, M.C.2    Ryder, L.3    Lloyd, R.G.4
  • 39
    • 0024076249 scopus 로고
    • Structure and regulation of the Escherichia coli ruv operon involved in DNA repair and recombination
    • Shinagawa, H., Makino, K., Amemura, M., Kimura, S., Iwasaki, H. & Nakata, A. (1988). Structure and regulation of the Escherichia coli ruv operon involved in DNA repair and recombination. J. Bacteriol. 170, 4322-4329.
    • (1988) J. Bacteriol. , vol.170 , pp. 4322-4329
    • Shinagawa, H.1    Makino, K.2    Amemura, M.3    Kimura, S.4    Iwasaki, H.5    Nakata, A.6
  • 40
    • 0020024650 scopus 로고
    • Damage to DNA induces expression of the ruv gene of Escherichia coli
    • Shurvinton, C. E. & Lloyd, R. G. (1982). Damage to DNA induces expression of the ruv gene of Escherichia coli. Mol. Gen. Genet. 185, 352-355.
    • (1982) Mol. Gen. Genet. , vol.185 , pp. 352-355
    • Shurvinton, C.E.1    Lloyd, R.G.2
  • 42
    • 0025940780 scopus 로고
    • Molecular analysis of the Escherichia coli ruvC gene, which encodes a Holliday junction-specific endonuclease
    • Takahagi, M., Iwasaki, H., Nakata, A. & Shinagawa, H. (1991). Molecular analysis of the Escherichia coli ruvC gene, which encodes a Holliday junction-specific endonuclease. J. Bacteriol. 173, 5747-5753.
    • (1991) J. Bacteriol. , vol.173 , pp. 5747-5753
    • Takahagi, M.1    Iwasaki, H.2    Nakata, A.3    Shinagawa, H.4
  • 43
    • 0028339115 scopus 로고
    • Structural requirements of substrate DNA for binding to and cleavage by RuvC, a Holliday junction resolvase
    • Takahagi, M., Iwasaki, H. & Shinagawa, H. (1994). Structural requirements of substrate DNA for binding to and cleavage by RuvC, a Holliday junction resolvase. J. Biol. Chem. 269, 15132-15139.
    • (1994) J. Biol. Chem. , vol.269 , pp. 15132-15139
    • Takahagi, M.1    Iwasaki, H.2    Shinagawa, H.3
  • 44
    • 0026444104 scopus 로고
    • Purification and physical properties of the RuvA and RuvB proteins of Escherichia coli
    • Tsaneva, I. R., Illing, G. T., Lloyd, R. G. & West, S. C. (1992a). Purification and physical properties of the RuvA and RuvB proteins of Escherichia coli. Mol. Gen. Genet. 235, 1-10.
    • (1992) Mol. Gen. Genet. , vol.235 , pp. 1-10
    • Tsaneva, I.R.1    Illing, G.T.2    Lloyd, R.G.3    West, S.C.4
  • 45
    • 0026633047 scopus 로고
    • ATP-dependent branch migration of Holliday junctions promoted by the RuvA and RuvB proteins of E. coli
    • Tsaneva, I. R., Müller, B. & West, S. C. (1992b). ATP-dependent branch migration of Holliday junctions promoted by the RuvA and RuvB proteins of E. coli. Cell, 69, 1171-1180.
    • (1992) Cell , vol.69 , pp. 1171-1180
    • Tsaneva, I.R.1    Müller, B.2    West, S.C.3
  • 46
    • 0026689684 scopus 로고
    • Enzymes and molecular mechanisms of genetic recombination
    • West, S. C. (1992). Enzymes and molecular mechanisms of genetic recombination. Annu. Rev. Biochem. 61, 603-640.
    • (1992) Annu. Rev. Biochem. , vol.61 , pp. 603-640
    • West, S.C.1
  • 47
    • 0029911566 scopus 로고    scopus 로고
    • The RuvABC proteins and Holliday junction processing in Escherichia coli
    • West, S. C. (1996). The RuvABC proteins and Holliday junction processing in Escherichia coli. J. Bacteriol. 178, 1237-1241.
    • (1996) J. Bacteriol. , vol.178 , pp. 1237-1241
    • West, S.C.1
  • 48
    • 0027438781 scopus 로고
    • Reverse branch migration of Holliday junctions by RecG protein: A new mechanism for resolution of intermediates in recombination and DNA repair
    • Whitby, M. C, Ryder, L. & Lloyd, R. G. (1993). Reverse branch migration of Holliday junctions by RecG protein: a new mechanism for resolution of intermediates in recombination and DNA repair. Cell, 75, 341-350.
    • (1993) Cell , vol.75 , pp. 341-350
    • Whitby, M.C.1    Ryder, L.2    Lloyd, R.G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.