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Volumn 118, Issue 51, 1996, Pages 12902-12908

Steric effects on the amide isomer equilibrium of prolyl peptides. Synthesis and conformational analysis of N-acetyl-5-tert-butylproline N′-methylamides

Author keywords

[No Author keywords available]

Indexed keywords

AMIDE; AMINO ACID DERIVATIVE; PROLINE DERIVATIVE;

EID: 0030461902     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja962013b     Document Type: Article
Times cited : (149)

References (62)
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    • and refs 15-19 therein
    • The characterization and reactivity of other distorted amides is discussed: (a) Shao, H.; Jiang, X.; Gantzel, P.; Goodman, M. Chem. Biol. 1994, 1, 231 and refs 15-19 therein. (b) Bennet, A. J.; Somayaji, V.; Brown, R. S.; Santarsiero, B. D. J. Am. Chem. Soc. 1991, 113, 7563. (c) Bennet, A. J.; Wang, Q.-P.; Slebocka-Tilk, H.; Somayaji. V.; Brown, R. S. J. Am. Chem. Soc. 1990, 112, 6383.
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    • note
    • 2O) (21.6) 21.9, (22.8) 24.5, 26.3 (26.4), 30.2 (31.9), (47.4) 49, 60.8 (62.3), 173.5 (173.7), 175.1) 175.2.
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    • and refs therein
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    • The effect of the medium on the rotational barriers for amide isomerization is discussed: (a) Wiberg, K. B.; Rablen, P. R.; Rush, D. J.; Keith, T. A. J. Am. Chem. Soc. 1995, 117, 4261 and refs therein. The effect of solvent on the rate of cis-trans isomerization N-terminal to proline is reviewed (b) Stein, R. L. Adv. Protein Chem. 1993, 44, 1.
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    • The measured rates of magnetization transfer from trans to cis isomer for 1 were 0.1970 at 55 °C, 0.5030 at 60 °C and 1.0007 at 70 °C; for 3 the rates were 0.2368 at 65 °C, 0.5567 at 75 °C and 0.8626 at 85 °C. The values for the energy barriers and uncertainties were calculated as described: (a) Mariappan, S. V. S.; Rabenstein, D. L. J. Org. Chem. 1992, 57, 6675. (b) Freeman, R. A Handbook of Nuclear Magnetic Resonance; John Wiley & Sons, Inc.: New York, 1988; pp 198-202. (c) Perrin, C. L.; Thoburn, J. D.; Kresge. A. J. J. Am. Chem. Soc. 1992, 114, 8800.
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    • The measured rates of magnetization transfer from trans to cis isomer for 1 were 0.1970 at 55 °C, 0.5030 at 60 °C and 1.0007 at 70 °C; for 3 the rates were 0.2368 at 65 °C, 0.5567 at 75 °C and 0.8626 at 85 °C. The values for the energy barriers and uncertainties were calculated as described: (a) Mariappan, S. V. S.; Rabenstein, D. L. J. Org. Chem. 1992, 57, 6675. (b) Freeman, R. A Handbook of Nuclear Magnetic Resonance; John Wiley & Sons, Inc.: New York, 1988; pp 198-202. (c) Perrin, C. L.; Thoburn, J. D.; Kresge. A. J. J. Am. Chem. Soc. 1992, 114, 8800.
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    • The measured rates of magnetization transfer from trans to cis isomer for 1 were 0.1970 at 55 °C, 0.5030 at 60 °C and 1.0007 at 70 °C; for 3 the rates were 0.2368 at 65 °C, 0.5567 at 75 °C and 0.8626 at 85 °C. The values for the energy barriers and uncertainties were calculated as described: (a) Mariappan, S. V. S.; Rabenstein, D. L. J. Org. Chem. 1992, 57, 6675. (b) Freeman, R. A Handbook of Nuclear Magnetic Resonance; John Wiley & Sons, Inc.: New York, 1988; pp 198-202. (c) Perrin, C. L.; Thoburn, J. D.; Kresge. A. J. J. Am. Chem. Soc. 1992, 114, 8800.
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    • 7 hydrogen bonding, yet may be due in part to intermolecular hydrogen bonding as discussed: (b) Rao, C. P.; Balaram, P.; Rao, C. N. R. Biopolymers 1983, 22, 2091 as well as in the references in 29.
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    • The use of IR spectroscopy to study intramolecular hydrogen bonds in model peptides is presented: (a) Haque, T. S.; Little, J. C.; Gellman, S. H. J. Am. Chem. Soc. 1994, 116, 4105. (b) Maxfield, F. R.; Leach, S. J.; Stimson, E. R.; Powers, S. P.; Scheraga, H. A. Biopolymers 1979, 18, 2507. (c) Avignon, M.; Huong, P. V. Biopolymers 1970, 9, 427.
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    • The use of IR spectroscopy to study intramolecular hydrogen bonds in model peptides is presented: (a) Haque, T. S.; Little, J. C.; Gellman, S. H. J. Am. Chem. Soc. 1994, 116, 4105. (b) Maxfield, F. R.; Leach, S. J.; Stimson, E. R.; Powers, S. P.; Scheraga, H. A. Biopolymers 1979, 18, 2507. (c) Avignon, M.; Huong, P. V. Biopolymers 1970, 9, 427.
    • (1979) Biopolymers , vol.18 , pp. 2507
    • Maxfield, F.R.1    Leach, S.J.2    Stimson, E.R.3    Powers, S.P.4    Scheraga, H.A.5
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    • The use of IR spectroscopy to study intramolecular hydrogen bonds in model peptides is presented: (a) Haque, T. S.; Little, J. C.; Gellman, S. H. J. Am. Chem. Soc. 1994, 116, 4105. (b) Maxfield, F. R.; Leach, S. J.; Stimson, E. R.; Powers, S. P.; Scheraga, H. A. Biopolymers 1979, 18, 2507. (c) Avignon, M.; Huong, P. V. Biopolymers 1970, 9, 427.
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    • note
    • The Ψ, φ, and ω values for the calculated energy minima of the trans- and cis-isomers in 1-3 are as follows: 1 trans-isomer; 128°. -57°, -179°; 1 cis-isomer; 131°, -59°, 0°; 2 trans-isomer, 5°, -77°, -169°; 2 cis-isomer; 1°, -82°, 9°; a second minima was also obtained with slightly higher energy (Δ = 0.6 kj/mol) for 2 cis-isomer. 133°, -70°, 17°; 3 trans-isomer; 122°, -25°, 152°; 3 cis-isomer; 126°, -26°, -32°. The ring puckering for all minima in 1-3 was consistent with an S conformation.
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    • The importance of type VI β-turns in PPIase catalyzed isomerization of X-Pro bonds is presented: Fischer, S.; Michnick, S.; Karplus, M. Biochemistry 1993, 32, 13830.
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    • Traub. W.; Shmueli, U. In Aspects of Protein Structure; Ramachandran, G. N., Ed.; Academic Press: New York, 1963; pp 81-92.
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