Initiator protein π can bind independently to two domains of the γ origin core of plasmid R6K: The direct repeats and the A+T-rich segment

Nucleic Acids Research

Volumn 24, Issue 10, 1996, Pages 1936-1942

  Levchenko, Igor ^a,b   Filutowicz, Marcin ^a  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

^b HOWARD HUGHES MEDICAL INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DEOXYRIBONUCLEASE I; DNA BINDING PROTEIN; HYDROXYL RADICAL; INITIATION FACTOR; PLASMID DNA;

ARTICLE; BINDING SITE; CONTROLLED STUDY; DNA REPLICATION ORIGIN; DNA SEQUENCE; DNA STRAND BREAKAGE; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN PURIFICATION; TANDEM REPEAT; TRANSCRIPTION REGULATION;

ADENINE; BASE SEQUENCE; BINDING SITES; DEOXYRIBONUCLEASE ECORI; DEOXYRIBONUCLEASE I; DEOXYRIBONUCLEASES, TYPE II SITE-SPECIFIC; DNA; DNA FOOTPRINTING; DNA HELICASES; DNA-BINDING PROTEINS; HYDROXYL RADICAL; MOLECULAR SEQUENCE DATA; PLASMIDS; REPETITIVE SEQUENCES, NUCLEIC ACID; THYMINE; TRANS-ACTIVATORS;

EID: 0029951580     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/24.10.1936     Document Type: Article

References (33)

1. Wu, F., Levchenko, I. and Filutowicz, M. (1995) J. Bacteriol., 177, 6338-6345.
2. Filutowicz, M., Dellis, S., Levchenko, I., Urh, M., Wu, F. and York, D. (1994) Progress in Nucleic Acid Research and Molecular Biology. Academic Press, Inc., San Diego, CA., Vol. 48.
3. Inuzuka, M. and Helinski, D. R. (1978) Proc. Natl Acad. Sci. USA, 75, 5381-5385.
4. Kolter, R., Inuzuka, M. and Helinski, D. R. (1978) Cell, 15, 1199-1208.
5. Filutowicz, M., McEachern, M. J. and Helinski, D. R. (1986) Proc. Natl Acad. Sci. USA, 83, 9645-9649.
6. Dellis, S. and Filutowicz, M. (1991) J. Bacteriol., 173, 1279-1286.
7. Shafferman, A., Kolter, R., Stalker, D. M. and Helinski, D. R. (1982) J. Mol. Biol., 161, 57-76.
8. Filutowicz, M., Davis, G., Greener, A. and Helinski, D. (1985a) Nucleic Acids Res., 13, 103-114.
9. Kelley, W. L. and Bastia, D. (1985) Proc. Natl Acad. Sci. USA, 82, 2574-2578.
10. Filutowicz, M., McEachern, M. J., Greener, A., Mukhopadhyay, P., Uhlenhopp, E., Durland, R. and Helinski, D. R. (1985b) In Helinski, D. R., Cohen, S. N., Clewell, D. B., Jackson, D. A. and Hollaender, A. (eds) Plasmids in Bacteria. Plenum Publishing Corporation, New York, pp. 125-140.
11. Filutowicz, M., Uhlenhopp, E. and Helinski, D. R. (1985c) J. Mol. Biol., 187, 225-239.
12. Germino, J. and Bastia, D. (1983) Cell, 34, 125-134.
13. York, D. and Filutowicz, M. (1993) J. Biol. Chem., 268, 21854-21861.
14. McEachern, M. J., Filutowicz, M. and Helinski, D. R. (1985) Proc. Natl Acad. Sci. USA, 82, 1480-1484.
15. Urh, M., Flashner, Y., Shafferman, A. and Filutowicz, M. (1995) J. Bacteriol., 177, 6732-6739.
16. Kolter, R. and Helinski, D. R. (1982) J. Mol. Biol., 161, 45-56.
17. Bramhill, D. and Kornberg, A. (1988) Cell, 54, 915-918.
18. Marians, K. J. (1992) Annu. Rev. Biochem., 61, 673-719.
19. Filutowicz, M. and Inman, R. B. (1991) J. Biol. Chem., 266, 24077-24083.
20. McEachern, M. J., Bott, M. A., Tooker, P. A. and Helinski, D. R. (1989) Proc. Natl Acad. Sci. USA, 86, 7942-7946.
21. Tullius, T. D., Dombroski, B. A., Churchill, M. E. A. and Kam, L. (1987) Methods Enzymol., 155, 537-558.
22. Greener, A., Filutowicz, M., McEachern, M. J. and Helinski, D. R. (1990) Mol. Gen. Genet., 224, 24-32.
23. Stalker, D. M., Kolter, R. and Helinski, D. R. (1979) Proc. Natl Acad. Sci. USA, 76, 1150-1154.
24. Filutowicz, M. and Appelt, K. (1988) Nucleic Acids Res., 16, 3829-3841.
25. Kelley, W. L. and Bastia, D. (1991) J. Biol. Chem., 266, 15924-15937.
26. Kelley, W. L., Patel, I. and Bastia, D. (1992) Proc. Natl Acad. Sci. USA, 89, 5078-5082.
27. Germino, J. and Bastia, D. (1983) Cell, 32, 131-140.
28. Moitoso de Vargas, L., Pargellis, C. A., Hasan, N. M., Bushman, E. W. and Landy, A. (1988) Cell, 54, 923-929.
29. Leung, P. C., Teplow, D. B. and Harshey, R. M. (1989) Nature, 338, 656-658.
30. Yung, B. Y.-M. and Kornberg, A. (1989) J. Biol Chem., 264, 6146-6150.
31. Kim, Y.-J. and Meyer, R. J. (1991) J. Bacteriol., 173, 5539-5545.
32. Dellis, S., Feng, J. and Filutowicz, M. (1996) J. Mol. Biol., 257, 550-560.
33. Sigman, D. S. and Chen, Ch-h. (1990) Annu. Rev. Biochem., 59, 207-236.