메뉴 건너뛰기




Volumn 118, Issue 36, 1996, Pages 8710-8712

Nonempirical calculations of a hydrated RNA duplex

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CALCULATION; HYDRATION; RNA STRUCTURE; THEORY;

EID: 0029845690     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja9612209     Document Type: Article
Times cited : (47)

References (42)
  • 2
    • 0004273321 scopus 로고
    • Proteins: A Theoretical Perspective of Dynamics, Structure and Thermodynamics; Prigodinen, I., Rice, S. Eds.; Wiley: New York
    • Brooks, C. L., III; Karplus, M.; Petitt, B. M. In Proteins: A Theoretical Perspective of Dynamics, Structure and Thermodynamics; Prigodinen, I., Rice, S. Eds.; Wiley Series on Advances in Chemical Physics, Vol. 71: Wiley: New York, 1988.
    • (1988) Wiley Series on Advances in Chemical Physics , vol.71
    • Brooks III, C.L.1    Karplus, M.2    Petitt, B.M.3
  • 23
    • 0025272625 scopus 로고
    • Hydration patterns fairly consistent with experiment have been obtained also by Monte Carlo calculations on the RNA duplex in aqueous solution (Subramanian, P. S.; Pitchumani, S.; Beveridge, D. L.; Berman, H. Biopolymers 1990, 29, 771-783).
    • (1990) Biopolymers , vol.29 , pp. 771-783
    • Subramanian, P.S.1    Pitchumani, S.2    Beveridge, D.L.3    Berman, H.4
  • 24
    • 2542632353 scopus 로고
    • X-ray structures have been determined also for other two salts of GpC: with ammonium (Aggarwal, A.; Islam, A. S.; Kuroda, R.; Sanderson, M. R.; Neidle, S. Acta Crystallogr. 1983, B39, 98) and with calcium (Hingerty, B.; Subramanian, E.; Stellman, S. D.; Sato, T.; Broyde, S. B.; Langridge, R. Acta Crystallogr. 1976, B32, 2998).
    • (1983) Acta Crystallogr. , vol.B39 , pp. 98
    • Aggarwal, A.1    Islam, A.S.2    Kuroda, R.3    Sanderson, M.R.4    Neidle, S.5
  • 25
    • 0011344170 scopus 로고
    • X-ray structures have been determined also for other two salts of GpC: with ammonium (Aggarwal, A.; Islam, A. S.; Kuroda, R.; Sanderson, M. R.; Neidle, S. Acta Crystallogr. 1983, B39, 98) and with calcium (Hingerty, B.; Subramanian, E.; Stellman, S. D.; Sato, T.; Broyde, S. B.; Langridge, R. Acta Crystallogr. 1976, B32, 2998).
    • (1976) Acta Crystallogr. , vol.B32 , pp. 2998
    • Hingerty, B.1    Subramanian, E.2    Stellman, S.D.3    Sato, T.4    Broyde, S.B.5    Langridge, R.6
  • 33
    • 0037855162 scopus 로고
    • Max-Planck-Institut für Festkörperforschung, Stuttgart, with the help of the group for numerically intensive computations of IBM Research Laboratory Zurich and the Abteilung Parrinello of MPI Stuttgart
    • CPMD version 2.5, written by Jürg Mutter, Max-Planck-Institut für Festkörperforschung, Stuttgart, 1995, with the help of the group for numerically intensive computations of IBM Research Laboratory Zurich and the Abteilung Parrinello of MPI Stuttgart.
    • (1995) CPMD Version 2.5
    • Mutter, J.1
  • 35
    • 10144247185 scopus 로고    scopus 로고
    • The atomic coordinates of our optimized structure are available by anonymous ftp
    • The atomic coordinates of our optimized structure are available by anonymous ftp (address: parrixl.mpi-stuttgart.mpg.de, directory pub/ outgoing).
  • 36
    • 10144227702 scopus 로고    scopus 로고
    • note
    • -3 kcal/mol for all the atoms.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.