-
1
-
-
0024039519
-
Splice site selection dominates over poly(A) site choice in RNA production from complex adenovirus transcription units
-
Adami, G., and J. R. Nevins. 1988. Splice site selection dominates over poly(A) site choice in RNA production from complex adenovirus transcription units. EMBO J. 7:2107-2116.
-
(1988)
EMBO J.
, vol.7
, pp. 2107-2116
-
-
Adami, G.1
Nevins, J.R.2
-
2
-
-
0025843597
-
Site-directed ribose methylation identifies 2′-OH groups in polyadenylation substrates critical for AAUAAA recognition and poly(A) addition
-
Bardwell, V. J., M. Wickens, S. Bienroth, W. Keller, B. S. Sproat, and A. I. Lamond. 1991. Site-directed ribose methylation identifies 2′-OH groups in polyadenylation substrates critical for AAUAAA recognition and poly(A) addition. Cell 65:125-133.
-
(1991)
Cell
, vol.65
, pp. 125-133
-
-
Bardwell, V.J.1
Wickens, M.2
Bienroth, S.3
Keller, W.4
Sproat, B.S.5
Lamond, A.I.6
-
3
-
-
0027439688
-
Assembly of a processive messenger RNA polyadenylation complex
-
Bienroth, S., W. Keller, and E. Wahle. 1993. Assembly of a processive messenger RNA polyadenylation complex. EMBO J. 12:585-594.
-
(1993)
EMBO J.
, vol.12
, pp. 585-594
-
-
Bienroth, S.1
Keller, W.2
Wahle, E.3
-
4
-
-
0026009674
-
Purification of the cleavage and polyadenylation factor involved in the 3′-processing of messenger RNA precursors
-
Bienroth, S., E. Wahle, C. Suter-Crazzolara, and W. Keller. 1991. Purification of the cleavage and polyadenylation factor involved in the 3′-processing of messenger RNA precursors. J. Biol. Chem. 266:19768-19776.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 19768-19776
-
-
Bienroth, S.1
Wahle, E.2
Suter-Crazzolara, C.3
Keller, W.4
-
5
-
-
0029382603
-
Finding splice sites within a wilderness of RNA
-
Black, D. L. 1995. Finding splice sites within a wilderness of RNA. RNA 1:763-771.
-
(1995)
RNA
, vol.1
, pp. 763-771
-
-
Black, D.L.1
-
6
-
-
0027471377
-
The human U1 snRNP-specific U1A protein inhibits polyadenylation of its own pre-mRNA
-
Boelens, W. C., E. J. R. Jansen, W. J. van Nenrooij, R. Stripecke, I. W. Mattaj, and S. I. Gunderson. 1993. The human U1 snRNP-specific U1A protein inhibits polyadenylation of its own pre-mRNA. Cell 72:881-892.
-
(1993)
Cell
, vol.72
, pp. 881-892
-
-
Boelens, W.C.1
Jansen, E.J.R.2
Van Nenrooij, W.J.3
Stripecke, R.4
Mattaj, I.W.5
Gunderson, S.I.6
-
7
-
-
0029120391
-
Cleavage site determinants in the mammalian polyadenylation signal
-
Chen, F., C. C. MacDonald, and J. Wilusz. 1995. Cleavage site determinants in the mammalian polyadenylation signal. Nucleic Acids Res. 23:2614-2620.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 2614-2620
-
-
Chen, F.1
MacDonald, C.C.2
Wilusz, J.3
-
8
-
-
0028356057
-
Sequence and position requirements for uridylate-rich downstream elements of polyadenylation signals
-
Chou, Z.-F., F. Chen, and J. Wilusz. 1994. Sequence and position requirements for uridylate-rich downstream elements of polyadenylation signals. Nucleic Acids Res. 22:2525-2531.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 2525-2531
-
-
Chou, Z.-F.1
Chen, F.2
Wilusz, J.3
-
9
-
-
0024547945
-
Poly(A) polymerase purified from HcLa cell nuclear extract is required for both cleavage and polyadenylation of pre-mRNA in vitro
-
Christofori, G., and W. Keller. 1989. Poly(A) polymerase purified from HcLa cell nuclear extract is required for both cleavage and polyadenylation of pre-mRNA in vitro. Mol. Cell. Biol. 9:193-203.
-
(1989)
Mol. Cell. Biol.
, vol.9
, pp. 193-203
-
-
Christofori, G.1
Keller, W.2
-
10
-
-
0023661279
-
Analysis of mRNA 3′ end formation by modification interference: The only modifications which prevent processing lie in AAUAAA and the poly(A) site
-
Conway, L., and M. Wickens. 1987. Analysis of mRNA 3′ end formation by modification interference: the only modifications which prevent processing lie in AAUAAA and the poly(A) site. EMBO J. 6:4177-4184.
-
(1987)
EMBO J.
, vol.6
, pp. 4177-4184
-
-
Conway, L.1
Wickens, M.2
-
11
-
-
0026516824
-
Analysis of the 5′-AAUAAA motif and its flanking sequence in human RNA: Relevance to cDNA library sorting
-
Day, I. N. M. 1992. Analysis of the 5′-AAUAAA motif and its flanking sequence in human RNA: relevance to cDNA library sorting. Gene 110:245-249.
-
(1992)
Gene
, vol.110
, pp. 245-249
-
-
Day, I.N.M.1
-
12
-
-
0029562737
-
The global folding of four-way helical junctions in RNA, including that in U1 snRNA
-
Duckett, D. R., A. I. H. Murchie, and D. M. J. Lilley. 1995. The global folding of four-way helical junctions in RNA, including that in U1 snRNA. Cell 83:1027-1036.
-
(1995)
Cell
, vol.83
, pp. 1027-1036
-
-
Duckett, D.R.1
Murchie, A.I.H.2
Lilley, D.M.J.3
-
13
-
-
0026463514
-
Activation of HIV-1 prc-mRNA 3′ processing in vitro requires both an upstream clement and TAR
-
Gilmartin, G. M., E. S. Fleming, and J. Oetjen. 1992. Activation of HIV-1 prc-mRNA 3′ processing in vitro requires both an upstream clement and TAR. EMBO J. 11:4419-4428.
-
(1992)
EMBO J.
, vol.11
, pp. 4419-4428
-
-
Gilmartin, G.M.1
Fleming, E.S.2
Oetjen, J.3
-
14
-
-
0028815108
-
CPSF recognition of an HIV-1 mRNA 3′-processing enhancer: Multiple sequence contacts involved in poly(A) site definition
-
Gilmartin, G. M., E. S. Fleming, J. Oetjen, and B. R. Graveley. 1995. CPSF recognition of an HIV-1 mRNA 3′-processing enhancer: multiple sequence contacts involved in poly(A) site definition. Genes Dev. 9:72-83.
-
(1995)
Genes Dev.
, vol.9
, pp. 72-83
-
-
Gilmartin, G.M.1
Fleming, E.S.2
Oetjen, J.3
Graveley, B.R.4
-
15
-
-
0030053316
-
Sequences regulating poly(A) site selection within the adenovirus major late transcription unit influence the interaction of constitutive processing factors with the pre-mRNA
-
Gilmartin, G. M., S.-L. Hung, J. D. DeZazzo, E. S. Fleming, and M. J. Imperiale. 1996. Sequences regulating poly(A) site selection within the adenovirus major late transcription unit influence the interaction of constitutive processing factors with the pre-mRNA. J. Virol. 70:1775-1783.
-
(1996)
J. Virol.
, vol.70
, pp. 1775-1783
-
-
Gilmartin, G.M.1
Hung, S.-L.2
DeZazzo, J.D.3
Fleming, E.S.4
Imperiale, M.J.5
-
16
-
-
0024805402
-
An ordered pathway of assembly of components required for polyadenylation site recognition and processing
-
Gilmartin, G. M., and J. R. Nevins. 1989. An ordered pathway of assembly of components required for polyadenylation site recognition and processing. Genes Dev. 3:2180-2189.
-
(1989)
Genes Dev.
, vol.3
, pp. 2180-2189
-
-
Gilmartin, G.M.1
Nevins, J.R.2
-
17
-
-
0024468838
-
Alterations in the pre-mRNA topology of the bovine growth hormone polyadenylation region decrease poly(A) site efficiency
-
Gimmi, E. R., M. E. Reff, and I. C. Deckman. 1989. Alterations in the pre-mRNA topology of the bovine growth hormone polyadenylation region decrease poly(A) site efficiency. Nucleic Acids Res. 17:6983-6998.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 6983-6998
-
-
Gimmi, E.R.1
Reff, M.E.2
Deckman, I.C.3
-
18
-
-
0030067697
-
A common mechanism for the enhancement of mRNA 3′ processing by U3 sequences in two distantly related lentiviruses
-
Graveley, B. R., and G. M. Gilmartin. 1996. A common mechanism for the enhancement of mRNA 3′ processing by U3 sequences in two distantly related lentiviruses. J. Virol. 70:1612-1617.
-
(1996)
J. Virol.
, vol.70
, pp. 1612-1617
-
-
Graveley, B.R.1
Gilmartin, G.M.2
-
19
-
-
0028173689
-
The human UlA snRNP protein regulates polyadenylation via a direct interaction with poly(A) polymerase
-
Gunderson, S. I., K. Beyer, G. Martin, W. Keller, W. C. Boelens, and I. W. Mattaj. 1994. The human UlA snRNP protein regulates polyadenylation via a direct interaction with poly(A) polymerase. Cell 76:531-541.
-
(1994)
Cell
, vol.76
, pp. 531-541
-
-
Gunderson, S.I.1
Beyer, K.2
Martin, G.3
Keller, W.4
Boelens, W.C.5
Mattaj, I.W.6
-
20
-
-
0025830138
-
Use of electrophoretic mobility to determine the secondary structure of a small antisense RNA
-
Jacques, J.-P., and M. M. Susskind. 1991. Use of electrophoretic mobility to determine the secondary structure of a small antisense RNA. Nucleic Acids Res. 19:2971-2977.
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 2971-2977
-
-
Jacques, J.-P.1
Susskind, M.M.2
-
21
-
-
0029069868
-
No end yet to messenger RNA 3′ processing!
-
Keller, W. 1995. No end yet to messenger RNA 3′ processing! Cell 81:829-832.
-
(1995)
Cell
, vol.81
, pp. 829-832
-
-
Keller, W.1
-
22
-
-
0026041206
-
Cleavage and polyadenylation factor CPF specifically interacts with the pre-mRNA 3′ processing signal AAUAAA
-
Keller, W., S. Bienroth, K. M. Lang, and G. Christofori. 1991. Cleavage and polyadenylation factor CPF specifically interacts with the pre-mRNA 3′ processing signal AAUAAA. EMBO J. 10:4241-4249.
-
(1991)
EMBO J.
, vol.10
, pp. 4241-4249
-
-
Keller, W.1
Bienroth, S.2
Lang, K.M.3
Christofori, G.4
-
23
-
-
0024841809
-
Enzymatic approaches to probing of RNA secondary and tertiary structure
-
Knapp, G. 1989. Enzymatic approaches to probing of RNA secondary and tertiary structure. Methods Enzymol. 180:192-212.
-
(1989)
Methods Enzymol.
, vol.180
, pp. 192-212
-
-
Knapp, G.1
-
24
-
-
0023904860
-
The complete sequence of dystrophin predicts a rod-shaped cytoskeletal protein
-
Koenig, M., A. P. Monaco, and L. M. Kunkel. 1988. The complete sequence of dystrophin predicts a rod-shaped cytoskeletal protein. Cell 53:219-228.
-
(1988)
Cell
, vol.53
, pp. 219-228
-
-
Koenig, M.1
Monaco, A.P.2
Kunkel, L.M.3
-
25
-
-
0027173194
-
The Leptomonas collosoma spliced leader RNA can switch between two alternate structural forms
-
LeCuyer, K. A., and D. M. Crothers. 1993. The Leptomonas collosoma spliced leader RNA can switch between two alternate structural forms. Biochemistry 32:5301-5311.
-
(1993)
Biochemistry
, vol.32
, pp. 5301-5311
-
-
LeCuyer, K.A.1
Crothers, D.M.2
-
26
-
-
0024693747
-
Definition of an efficient synthetic poly(A) site
-
Levitt, N., D. Breggs, A. Gil, and N. J. Proudfoot. 1989. Definition of an efficient synthetic poly(A) site. Genes Dev. 3:1019-1025.
-
(1989)
Genes Dev.
, vol.3
, pp. 1019-1025
-
-
Levitt, N.1
Breggs, D.2
Gil, A.3
Proudfoot, N.J.4
-
27
-
-
0030067593
-
An intron enhancer recognized by splicing factors activates polyadenylation
-
Lou, H., R. F. Gagel, and S. M. Berget. 1996. An intron enhancer recognized by splicing factors activates polyadenylation. Genes Dev. 10:208-219.
-
(1996)
Genes Dev.
, vol.10
, pp. 208-219
-
-
Lou, H.1
Gagel, R.F.2
Berget, S.M.3
-
28
-
-
0028269622
-
Direct interaction of the U1 snRNP-A protein with the upstream efficiency element of the SV40 late polyadenylation signal
-
Lutz, C. S., and J. C. Alwine. 1994. Direct interaction of the U1 snRNP-A protein with the upstream efficiency element of the SV40 late polyadenylation signal. Genes Dev. 8:576-586.
-
(1994)
Genes Dev.
, vol.8
, pp. 576-586
-
-
Lutz, C.S.1
Alwine, J.C.2
-
29
-
-
0030024350
-
Interaction between the U1 snRNP-A protein and the 160-kD subunit of cleavage-polyadenylation specificity factor increases polyadenylation efficiency in vitro
-
Lutz, C. S., K. G. K. Murthy, N. Schek, J. P. O'Connor, J. L. Manley, and J. C. Alwine. 1996. Interaction between the U1 snRNP-A protein and the 160-kD subunit of cleavage-polyadenylation specificity factor increases polyadenylation efficiency in vitro. Genes Dev. 10:325-337.
-
(1996)
Genes Dev.
, vol.10
, pp. 325-337
-
-
Lutz, C.S.1
Murthy, K.G.K.2
Schek, N.3
O'Connor, J.P.4
Manley, J.L.5
Alwine, J.C.6
-
30
-
-
0028025647
-
The 64-kilodalton subunit of the CstF polyadenylation factor binds to pre-mRNA downstream of the cleavage site and influences cleavage site location
-
MacDonald, C. C., J. Wilusz, and T. Shenk. 1994. The 64-kilodalton subunit of the CstF polyadenylation factor binds to pre-mRNA downstream of the cleavage site and influences cleavage site location. Mol. Cell. Biol. 14:6647-6654.
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 6647-6654
-
-
MacDonald, C.C.1
Wilusz, J.2
Shenk, T.3
-
31
-
-
0029090065
-
Upstream sequence elements enhance poly(A) site efficiency of the C2 complement gene and are phylogenetically conserved
-
Moreira, A., M. Wollerton, J. Monks, and N. J. Proudfoot. 1995. Upstream sequence elements enhance poly(A) site efficiency of the C2 complement gene and are phylogenetically conserved. EMBO J. 14:3809-3819.
-
(1995)
EMBO J.
, vol.14
, pp. 3809-3819
-
-
Moreira, A.1
Wollerton, M.2
Monks, J.3
Proudfoot, N.J.4
-
32
-
-
0026694636
-
Characterization of the multisubunit cleavage-polyadenylation specificity factor from calf thymus
-
Murthy, K. G. K., and J. L. Manley. 1992. Characterization of the multisubunit cleavage-polyadenylation specificity factor from calf thymus. J. Biol. Chem. 267:14804-14811.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 14804-14811
-
-
Murthy, K.G.K.1
Manley, J.L.2
-
33
-
-
0025935848
-
Mutation of the AAUAAA polyadenylation signal depresses in vitro splicing of proximal but not distal introns
-
Niwa, M., and S. M. Berget. 1991. Mutation of the AAUAAA polyadenylation signal depresses in vitro splicing of proximal but not distal introns. Genes Dev. 5:2086-2095.
-
(1991)
Genes Dev.
, vol.5
, pp. 2086-2095
-
-
Niwa, M.1
Berget, S.M.2
-
34
-
-
0024988383
-
In vitro polyadenylation is stimulated by the presence of an upstream intron
-
Niwa, M., S. D. Rose, and S. M. Berget. 1990. In vitro polyadenylation is stimulated by the presence of an upstream intron. Genes Dev. 4:1552-1559.
-
(1990)
Genes Dev.
, vol.4
, pp. 1552-1559
-
-
Niwa, M.1
Rose, S.D.2
Berget, S.M.3
-
35
-
-
0027025314
-
Balanced efficiencies of splicing and cleavage-polyadenylation arc required for μs and μm mRNA regulation
-
Peterson, M. L. 1992. Balanced efficiencies of splicing and cleavage-polyadenylation arc required for μs and μm mRNA regulation. Gene Expr. 2:319-327.
-
(1992)
Gene Expr.
, vol.2
, pp. 319-327
-
-
Peterson, M.L.1
-
36
-
-
0029991323
-
m, involved in the 3′ end processing of messenger RNA precursors
-
m, involved in the 3′ end processing of messenger RNA precursors. J. Biol. Chem. 271:6107-6113.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 6107-6113
-
-
Rüegsegger, U.1
Beyer, K.2
Keller, W.3
-
37
-
-
0025029405
-
Point mutations in AAUAAA and the poly(A) addition site: Effects on the accuracy and efficiency of cleavage and polyadenylation in vitro
-
Sheets, M. D., S. C. Ogg, and M. P. Wickens. 1990. Point mutations in AAUAAA and the poly(A) addition site: effects on the accuracy and efficiency of cleavage and polyadenylation in vitro. Nucleic Acids Res. 18:5799-5805.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 5799-5805
-
-
Sheets, M.D.1
Ogg, S.C.2
Wickens, M.P.3
-
38
-
-
0025695149
-
A multisubunit factor, CstF, is required for polyadenylation of mammalian pre-mRNAs
-
Takagaki, Y., J. L. Manley, C. C. MacDonald, J. Wilusz, and T. Shenk. 1990. A multisubunit factor, CstF, is required for polyadenylation of mammalian pre-mRNAs. Genes Dev. 4:2112-2120.
-
(1990)
Genes Dev.
, vol.4
, pp. 2112-2120
-
-
Takagaki, Y.1
Manley, J.L.2
MacDonald, C.C.3
Wilusz, J.4
Shenk, T.5
-
39
-
-
0024762583
-
Four factors are required for 3′-end cleavage of pre-mRNAs
-
Takagaki, Y., L. C. Ryner, and J. L. Manley. 1989. Four factors are required for 3′-end cleavage of pre-mRNAs. Genes Dev. 3:1711-1724.
-
(1989)
Genes Dev.
, vol.3
, pp. 1711-1724
-
-
Takagaki, Y.1
Ryner, L.C.2
Manley, J.L.3
-
40
-
-
0025336457
-
Bulge loops used to measure the helical twist of RNA in solution
-
Tang, R. S., and D. E. Draper. 1990. Bulge loops used to measure the helical twist of RNA in solution. Biochemistry 29:5232-5327.
-
(1990)
Biochemistry
, vol.29
, pp. 5232-5327
-
-
Tang, R.S.1
Draper, D.E.2
-
41
-
-
0027981980
-
Bend and helical twist associated with a symmetric internal loop from 5S ribosomal RNA
-
Tang, R. S., and D. E. Draper. 1994. Bend and helical twist associated with a symmetric internal loop from 5S ribosomal RNA. Biochemistry 33:10089-10093.
-
(1994)
Biochemistry
, vol.33
, pp. 10089-10093
-
-
Tang, R.S.1
Draper, D.E.2
-
42
-
-
0026785025
-
Elements upstream of the AAUAAA within the human immunodeficiency virus polyadenylation signal are required for efficient polyadenylation in vitro
-
Valsamakis, A., N. Schek, and J. C. Alwine. 1992. Elements upstream of the AAUAAA within the human immunodeficiency virus polyadenylation signal are required for efficient polyadenylation in vitro. Mol. Cell. Biol. 12:3699-3705.
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 3699-3705
-
-
Valsamakis, A.1
Schek, N.2
Alwine, J.C.3
-
43
-
-
0025965164
-
The human immunodeficiency virus type 1 polyadenylation signal: A 3′ long terminal repeat element upstream of the AAUAAA necessary for efficient polyadenylylation
-
Valsamakis, A., S. Zeichner, S. Carswell, and J. C. Alwine. 1991. The human immunodeficiency virus type 1 polyadenylation signal: a 3′ long terminal repeat element upstream of the AAUAAA necessary for efficient polyadenylylation. Proc. Natl. Acad. Sci. USA 88:2108-2112.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 2108-2112
-
-
Valsamakis, A.1
Zeichner, S.2
Carswell, S.3
Alwine, J.C.4
-
44
-
-
0025987814
-
Isolation and expression of cDNA clones encoding mammalian poly(A) polymerase
-
Wahle, E., G. Martin, E. Schiltz, and W. Keller. 1991. Isolation and expression of cDNA clones encoding mammalian poly(A) polymerase. EMBO J. 10:4251-4257.
-
(1991)
EMBO J.
, vol.10
, pp. 4251-4257
-
-
Wahle, E.1
Martin, G.2
Schiltz, E.3
Keller, W.4
-
45
-
-
0028895435
-
Poly(A) tail length control is caused by termination of processive synthesis
-
Wahle, E. 1995. Poly(A) tail length control is caused by termination of processive synthesis. J. Biol. Chem. 270:2800-2808.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 2800-2808
-
-
Wahle, E.1
-
46
-
-
0028988016
-
3′-End cleavage and polyadenylation of mRNA precursors
-
Wahle, E. 1995. 3′-End cleavage and polyadenylation of mRNA precursors. Biochim. Biophys. Acta 1261:183-194.
-
(1995)
Biochim. Biophys. Acta
, vol.1261
, pp. 183-194
-
-
Wahle, E.1
-
47
-
-
0026085473
-
Poly(A) site efficiency reflects the stability of complex formation involving the downstream ele-ment
-
Weiss, E. A., G. M. Gilmartin, and J. R. Nevins. 1991. Poly(A) site efficiency reflects the stability of complex formation involving the downstream ele-ment. EMBO J. 10:215-219.
-
(1991)
EMBO J.
, vol.10
, pp. 215-219
-
-
Weiss, E.A.1
Gilmartin, G.M.2
Nevins, J.R.3
-
48
-
-
0025230365
-
Polyadenylation of mRNA: Minimal substrates and a requirement for the 2′ hydroxyl of the U in AAUAAA
-
Wigley, P. L., M. D. Sheets, D. A. Zarkower, M. E. Whitmer, and M. Wickens. 1990. Polyadenylation of mRNA: minimal substrates and a requirement for the 2′ hydroxyl of the U in AAUAAA. Mol. Cell. Biol. 10:1705-1713.
-
(1990)
Mol. Cell. Biol.
, vol.10
, pp. 1705-1713
-
-
Wigley, P.L.1
Sheets, M.D.2
Zarkower, D.A.3
Whitmer, M.E.4
Wickens, M.5
-
49
-
-
0023661376
-
Specific pre-cleavage and post-cleavage complexes involved in the formation of SV40 late mRNA 3′ termini in vitro
-
Zarkower, D., and M. Wickens. 1987. Specific pre-cleavage and post-cleavage complexes involved in the formation of SV40 late mRNA 3′ termini in vitro. EMBO J. 6:4185-4192.
-
(1987)
EMBO J.
, vol.6
, pp. 4185-4192
-
-
Zarkower, D.1
Wickens, M.2
|