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Volumn 260, Issue 3, 1996, Pages 359-368

Mimicking somatic hypermutation: Affinity maturation of antibodies displayed on bacteriophage using a bacterial mutator strain

Author keywords

Affinity maturation; Antibody; Mutagenesis; mutD5; Phage display

Indexed keywords

ANTIBODY AFFINITY; ANTIGEN BINDING; ARTICLE; BACTERIOPHAGE; BINDING AFFINITY; CELL MUTANT; CONTROLLED STUDY; ESCHERICHIA COLI; GENEALOGY; NONHUMAN; PHAGE DISPLAY; POINT MUTATION; PRIMARY IMMUNE RESPONSE; PRIORITY JOURNAL; SECONDARY IMMUNE RESPONSE; SOMATIC MUTATION;

EID: 0005229135     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1996.0406     Document Type: Article
Times cited : (193)

References (55)
  • 1
    • 0023161406 scopus 로고
    • Mutation drift and repertoire shift in the maturation of the immune response
    • Berek, C. & Milstein, C. (1987). Mutation drift and repertoire shift in the maturation of the immune response. Immunol. Rev. 96, 23-41.
    • (1987) Immunol. Rev. , vol.96 , pp. 23-41
    • Berek, C.1    Milstein, C.2
  • 2
    • 0026331458 scopus 로고
    • Maturation of the immune response in germinal centers
    • Berek, C., Berger, A. & Apel, M. (1991). Maturation of the immune response in germinal centers. Cell, 67, 1121-1129.
    • (1991) Cell , vol.67 , pp. 1121-1129
    • Berek, C.1    Berger, A.2    Apel, M.3
  • 3
    • 0023821895 scopus 로고
    • The dynamic nature of the antibody repertoire
    • Berek, C. & Milstein, C. (1988). The dynamic nature of the antibody repertoire. Immunol. Rev. 105, 5-26.
    • (1988) Immunol. Rev. , vol.105 , pp. 5-26
    • Berek, C.1    Milstein, C.2
  • 4
    • 0027499308 scopus 로고
    • Passenger transgenes reveal intrinsic specificity of the antibody hypermutation mechanism: Clustering, polarity, and specific hot spots
    • Betz, A. G., Rada, C., Pannell, R., Milstein, C. & Neuberger, M. S. (1993). Passenger transgenes reveal intrinsic specificity of the antibody hypermutation mechanism: clustering, polarity, and specific hot spots. Proc. Natl Acad. Sci. USA, 90, 2385-2388.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 2385-2388
    • Betz, A.G.1    Rada, C.2    Pannell, R.3    Milstein, C.4    Neuberger, M.S.5
  • 5
    • 0023604840 scopus 로고
    • A limited number of B cell lineages generates the heterogeneity of a secondary immune response
    • Blier, P. R. & Bothwell, A. (1987). A limited number of B cell lineages generates the heterogeneity of a secondary immune response. J. Immunol. 139, 3996-4006.
    • (1987) J. Immunol. , vol.139 , pp. 3996-4006
    • Blier, P.R.1    Bothwell, A.2
  • 6
    • 0014019617 scopus 로고
    • Origin of antibody variation
    • Brenner, S. & Milstein, C. (1966). Origin of antibody variation. Nature, 211, 242-243.
    • (1966) Nature , vol.211 , pp. 242-243
    • Brenner, S.1    Milstein, C.2
  • 7
    • 0029047689 scopus 로고
    • Enhancement and destruction of antibody function by somatic mutation: Unequal occurrence is controlled by V gene combinatorial associations
    • Chen, C., Roberts, V. A., Stevens, S., Brown, M., Stenzel-Poore, M. P. & Rittenberg, M. B. (1995). Enhancement and destruction of antibody function by somatic mutation: unequal occurrence is controlled by V gene combinatorial associations. EMBO J. 14, 2784-2794.
    • (1995) EMBO J. , vol.14 , pp. 2784-2794
    • Chen, C.1    Roberts, V.A.2    Stevens, S.3    Brown, M.4    Stenzel-Poore, M.P.5    Rittenberg, M.B.6
  • 8
    • 0027994717 scopus 로고
    • Toward a code for the interactions of zinc fingers with DNA: Selection of randomized fingers displayed on phage
    • Choo, Y. & Klug, A. (1994). Toward a code for the interactions of zinc fingers with DNA: selection of randomized fingers displayed on phage. Proc. Natl Acad. Sci. USA, 91, 111163-11167.
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 111163-111167
    • Choo, Y.1    Klug, A.2
  • 9
    • 0017222053 scopus 로고
    • Bacterial mutator genes and the control of spontaneous mutation
    • Cox, E. C. (1976). Bacterial mutator genes and the control of spontaneous mutation. Annu. Rev. Genet. 10, 135-156.
    • (1976) Annu. Rev. Genet. , vol.10 , pp. 135-156
    • Cox, E.C.1
  • 10
    • 0024720287 scopus 로고
    • Saturation of mismatch repair in the mutd5 mutator strain of Escherichia coli
    • Damagnez, V., Doutriaux, M. P. & Radman, M. (1989). Saturation of mismatch repair in the mutD5 mutator strain of Escherichia coli. J. Bacteriol. 171, 4494-4497.
    • (1989) J. Bacteriol. , vol.171 , pp. 4494-4497
    • Damagnez, V.1    Doutriaux, M.P.2    Radman, M.3
  • 11
    • 0025254304 scopus 로고
    • Regulated expression of foreign genes fused to lac: Control by glucose levels in growth medium
    • De Bellis, D. & Schwartz, I. (1990). Regulated expression of foreign genes fused to lac: control by glucose levels in growth medium. Nucl. Acids Res. 18, 1311-13XX.
    • (1990) Nucl. Acids Res. , vol.18
    • De Bellis, D.1    Schwartz, I.2
  • 12
    • 0015959011 scopus 로고
    • Conditional mutator gene in Echerichia coli: Isolation, mapping, and effector studies
    • Degnen, G. E. & Cox, E. C. (1974). Conditional mutator gene in Echerichia coli: isolation, mapping, and effector studies. J. Bacteriol. 117, 477-487.
    • (1974) J. Bacteriol. , vol.117 , pp. 477-487
    • Degnen, G.E.1    Cox, E.C.2
  • 13
    • 0017806301 scopus 로고
    • Nucleotide sequence heterogeneity of an RNA phage population
    • Domingo, E., Sabo, D., Taniguchi, T. & Weissmann, C. (1978). Nucleotide sequence heterogeneity of an RNA phage population. Cell, 13, 735-744.
    • (1978) Cell , vol.13 , pp. 735-744
    • Domingo, E.1    Sabo, D.2    Taniguchi, T.3    Weissmann, C.4
  • 14
    • 0001529751 scopus 로고
    • Determination of antibody affinity for haptens and antigens by means of fluorescence quenching
    • Eisen, H. N. (1964). Determination of antibody affinity for haptens and antigens by means of fluorescence quenching. Meth. Med. Res. 10, 115-121.
    • (1964) Meth. Med. Res. , vol.10 , pp. 115-121
    • Eisen, H.N.1
  • 15
    • 0028338333 scopus 로고
    • In vitro assembly of repertoires of antibody chains on the surface of phage by renaturation
    • Figini, M., Marks, J. D., Winter, G. & Griffiths, A. D. (1994). In vitro assembly of repertoires of antibody chains on the surface of phage by renaturation. J. Mol. Biol. 239, 68-79.
    • (1994) J. Mol. Biol. , vol.239 , pp. 68-79
    • Figini, M.1    Marks, J.D.2    Winter, G.3    Griffiths, A.D.4
  • 16
    • 0025856601 scopus 로고
    • Kinetic maturation of an immune response
    • Foote, J. & Milstein, C. (1991). Kinetic maturation of an immune response. Nature, 352, 530-532.
    • (1991) Nature , vol.352 , pp. 530-532
    • Foote, J.1    Milstein, C.2
  • 17
    • 0026559783 scopus 로고
    • Antibody framework residues affecting the conformation of the hypervariable loops
    • Foote, J. & Winter, G. (1992). Antibody framework residues affecting the conformation of the hypervariable loops. J. Mol. Biol. 224, 487-499.
    • (1992) J. Mol. Biol. , vol.224 , pp. 487-499
    • Foote, J.1    Winter, G.2
  • 18
    • 0016292997 scopus 로고
    • Mutational specificity of a conditional Escherichia coli mutator, mutD5
    • Fowler, R. G., Degnen, G. E. & Cox, E. C. (1974). Mutational specificity of a conditional Escherichia coli mutator, mutD5. Mol. Gen. Genet. 133, 179-191.
    • (1974) Mol. Gen. Genet. , vol.133 , pp. 179-191
    • Fowler, R.G.1    Degnen, G.E.2    Cox, E.C.3
  • 19
    • 0022483073 scopus 로고
    • Characterization of mutational specificity within the lacI gene for a mutD5 mutator strain of Escherichia coli defective in 3′ to 5′ exonuclease (proofreading) activity
    • Fowler, R. G., Schaaper, R. M. & Glickman, B. W. (1986). Characterization of mutational specificity within the lacI gene for a mutD5 mutator strain of Escherichia coli defective in 3′ to 5′ exonuclease (proofreading) activity. J. Bacteriol. 167, 130-137.
    • (1986) J. Bacteriol. , vol.167 , pp. 130-137
    • Fowler, R.G.1    Schaaper, R.M.2    Glickman, B.W.3
  • 22
    • 0026699293 scopus 로고
    • Selection of phage antibodies by binding affinity mimicking affinity maturation
    • Hawkins, R. E., Russell, S. J. & Winter, G. (1992). Selection of phage antibodies by binding affinity mimicking affinity maturation. J. Mol. Biol. 226, 889-896.
    • (1992) J. Mol. Biol. , vol.226 , pp. 889-896
    • Hawkins, R.E.1    Russell, S.J.2    Winter, G.3
  • 23
    • 0027768856 scopus 로고
    • The contribution of contact and non-contact residues of antibody in the affinity of binding to antigen: The interaction of mutant D1.3 antibodies with lysozyme
    • Hawkins, R. E., Russell, S. J., Baier, M. & Winter, G. (1993). The contribution of contact and non-contact residues of antibody in the affinity of binding to antigen: the interaction of mutant D1.3 antibodies with lysozyme. J. Mol. Biol. 234, 958-964.
    • (1993) J. Mol. Biol. , vol.234 , pp. 958-964
    • Hawkins, R.E.1    Russell, S.J.2    Baier, M.3    Winter, G.4
  • 24
    • 0023781763 scopus 로고
    • Genetic approach to facilitate purification of recombinant proteins with a novel metal chelate adsorbent
    • Hochuli, E., Bannwarth, W., Döbeli, H., Gentz, R. & Stüber, D. (1988). Genetic approach to facilitate purification of recombinant proteins with a novel metal chelate adsorbent. Bio/Technol. 6, 1321-1325.
    • (1988) Bio/Technol. , vol.6 , pp. 1321-1325
    • Hochuli, E.1    Bannwarth, W.2    Döbeli, H.3    Gentz, R.4    Stüber, D.5
  • 25
    • 0026055806 scopus 로고
    • Purification of his-tagged proteins in non-denaturing conditions suggests a convenient method for protein interaction studies
    • Hoffmann, A. & Roeder, R. G. (1991). Purification of His-tagged proteins in non-denaturing conditions suggests a convenient method for protein interaction studies. Nucl. Acids Res. 19, 6337-6338.
    • (1991) Nucl. Acids Res. , vol.19 , pp. 6337-6338
    • Hoffmann, A.1    Roeder, R.G.2
  • 26
    • 0026060620 scopus 로고
    • Intraclonal generation of antibody mutants in germinal centres
    • Jacob, J., Kelsoe, G., Rajewsky, K. & Weiss, U. (1991). Intraclonal generation of antibody mutants in germinal centres. Nature, 354, 389-392.
    • (1991) Nature , vol.354 , pp. 389-392
    • Jacob, J.1    Kelsoe, G.2    Rajewsky, K.3    Weiss, U.4
  • 28
    • 43949172221 scopus 로고
    • Cyclic re-entry of germinal center B cells and the efficiency of affinity maturation
    • Kepler, T. B. & Perelson, A. S. (1993). Cyclic re-entry of germinal center B cells and the efficiency of affinity maturation. Immunol. Today, 14, 412-415.
    • (1993) Immunol. Today , vol.14 , pp. 412-415
    • Kepler, T.B.1    Perelson, A.S.2
  • 29
    • 0003575039 scopus 로고
    • Stepwise intraclonal maturation of antibody affinity through somatic hypermutation
    • Kocks, C. & Rajewsky, K. (1988). Stepwise intraclonal maturation of antibody affinity through somatic hypermutation. Proc. Natl Acad. Sci. USA, 85, 8206-8210.
    • (1988) Proc. Natl Acad. Sci. USA , vol.85 , pp. 8206-8210
    • Kocks, C.1    Rajewsky, K.2
  • 30
    • 0027491651 scopus 로고
    • Tracing B cell development in human germinal centres by molecular analysis of single cells picked from histological sections
    • Küppers, R., Zhao, M., Hansmann, M. L. & Rajewsky, K. (1993). Tracing B cell development in human germinal centres by molecular analysis of single cells picked from histological sections. EMBO J. 12, 4955-4967.
    • (1993) EMBO J. , vol.12 , pp. 4955-4967
    • Küppers, R.1    Zhao, M.2    Hansmann, M.L.3    Rajewsky, K.4
  • 31
    • 0342367772 scopus 로고
    • Isolation of a thermostable enzyme variant by cloning and selection in a thermophile
    • Liao, H., McKenzie, T. & Hageman, R. (1986). Isolation of a thermostable enzyme variant by cloning and selection in a thermophile. Proc. Natl Acad. Sci. USA, 83, 576-580.
    • (1986) Proc. Natl Acad. Sci. USA , vol.83 , pp. 576-580
    • Liao, H.1    McKenzie, T.2    Hageman, R.3
  • 32
    • 0018257739 scopus 로고
    • Inheritance of antibody specificity. Anti-2-phenyloxazolone in the mouse
    • Mäkelä, O., Kaartinene, M., Pelkonen, J. L. T. & Karjalainen, K. J. (1978). Inheritance of antibody specificity. Anti-2-phenyloxazolone in the mouse. J. Exp. Med. 148, 1644-1660.
    • (1978) J. Exp. Med. , vol.148 , pp. 1644-1660
    • Mäkelä, O.1    Kaartinene, M.2    Pelkonen, J.L.T.3    Karjalainen, K.J.4
  • 34
    • 14744300211 scopus 로고
    • By-passing immunization: Building high affinity human antibodies by chain shuffling
    • Marks, J. D., Griffiths, A. D., Malmqvist, M., Clackson, T., Bye, J. M. & Winter, G. (1992). By-passing immunization: building high affinity human antibodies by chain shuffling. Bio/Technology, 10, 779-783.
    • (1992) Bio/Technology , vol.10 , pp. 779-783
    • Marks, J.D.1    Griffiths, A.D.2    Malmqvist, M.3    Clackson, T.4    Bye, J.M.5    Winter, G.6
  • 35
    • 0025226085 scopus 로고
    • Phage antibodies: Filamentous phage displaying antibody variable domains
    • McCafferty, J., Griffiths, A. D., Winter, G. & Chiswell, D. J. (1990). Phage antibodies: filamentous phage displaying antibody variable domains. Nature, 348, 552-554.
    • (1990) Nature , vol.348 , pp. 552-554
    • McCafferty, J.1    Griffiths, A.D.2    Winter, G.3    Chiswell, D.J.4
  • 36
    • 0008476550 scopus 로고
    • Generation of antibody diversity in the immune response of BALB/c mice to influenza virus hemagglutinin
    • McKean, D., Huppi, K., Bell, M., Staudt, L., Gerhard, W. & Weigert, M. (1984). Generation of antibody diversity in the immune response of BALB/c mice to influenza virus hemagglutinin. Proc. Natl Acad. Sci. USA, 81, 3180-3184.
    • (1984) Proc. Natl Acad. Sci. USA , vol.81 , pp. 3180-3184
    • McKean, D.1    Huppi, K.2    Bell, M.3    Staudt, L.4    Gerhard, W.5    Weigert, M.6
  • 37
    • 0003785155 scopus 로고
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Miller, J. H. (1972). Experiments in Molecular Genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1972) Experiments in Molecular Genetics
    • Miller, J.H.1
  • 38
    • 0023052239 scopus 로고
    • An hsp70-like protein in the ER: Identity with the 78kd glucose-regulated protein and immunoglobulin heavy chain binding protein
    • Munro, S. & Pelham, H. R. B. (1986). An hsp70-like protein in the ER: identity with the 78kd glucose-regulated protein and immunoglobulin heavy chain binding protein. Cell, 46, 291-300.
    • (1986) Cell , vol.46 , pp. 291-300
    • Munro, S.1    Pelham, H.R.B.2
  • 40
    • 0026443954 scopus 로고
    • Somatic hypermutagenesis in immunoglobulin gene. II. Influence of neighbouring base sequences on mutagenesis
    • Rogozin, I. B. & Kolchanov, N. A. (1992). Somatic hypermutagenesis in immunoglobulin gene. II. influence of neighbouring base sequences on mutagenesis. Biochim. Biophys. Acta, 1171, 11-18.
    • (1992) Biochim. Biophys. Acta , vol.1171 , pp. 11-18
    • Rogozin, I.B.1    Kolchanov, N.A.2
  • 41
    • 0346265834 scopus 로고
    • Mechanisms of mutagenesis in the Escherichia coli mutator mutD5: Role of DNA mismatch repair
    • Schaaper, R. M. (1988). Mechanisms of mutagenesis in the Escherichia coli mutator mutD5: role of DNA mismatch repair. Proc. Natl Acad. Sci. USA, 85, 8126-8130.
    • (1988) Proc. Natl Acad. Sci. USA , vol.85 , pp. 8126-8130
    • Schaaper, R.M.1
  • 42
    • 0027482444 scopus 로고
    • Base selection, proofreading, and mismatch repair during DNA replication in Escherichia coli
    • Schaaper, R. M. (1993). Base selection, proofreading, and mismatch repair during DNA replication in Escherichia coli. J. Biol. Chem. 268, 23762-23765.
    • (1993) J. Biol. Chem. , vol.268 , pp. 23762-23765
    • Schaaper, R.M.1
  • 43
    • 0024437947 scopus 로고
    • The extreme mutator effect of Escherichia coli mutD5 results from saturation of mismatch repair by excessive DNA replication errors
    • Schaaper, R. M. & Radman, M. (1989). The extreme mutator effect of Escherichia coli mutD5 results from saturation of mismatch repair by excessive DNA replication errors. EMBO J. 8, 3511-3516.
    • (1989) EMBO J. , vol.8 , pp. 3511-3516
    • Schaaper, R.M.1    Radman, M.2
  • 44
    • 0010219240 scopus 로고
    • A separate editing exonuclease for DNA replication: The epsilon subunit of Escherichia coli DNA polymerase III holoenzyme
    • Scheuermann, R. H. & Echols, H. (1984). A separate editing exonuclease for DNA replication: the epsilon subunit of Escherichia coli DNA polymerase III holoenzyme. Proc. Natl Acad. Sci. USA, 81, 7747-7751.
    • (1984) Proc. Natl Acad. Sci. USA , vol.81 , pp. 7747-7751
    • Scheuermann, R.H.1    Echols, H.2
  • 45
    • 0025358376 scopus 로고
    • Structural correlates of high antibody affinity: Three engineered amino acid substitutions can increase the affinity of an anti-p-azophenylarsonate antibody 200-fold
    • Sharon, J. (1990). Structural correlates of high antibody affinity: three engineered amino acid substitutions can increase the affinity of an anti-p-azophenylarsonate antibody 200-fold. Proc. Natl Acad. Sci. USA, 87, 4814-4817.
    • (1990) Proc. Natl Acad. Sci. USA , vol.87 , pp. 4814-4817
    • Sharon, J.1
  • 46
    • 0021679725 scopus 로고
    • Selection pressures on codon usage in the complete genome of bacteriophage T7
    • Sharp, P. M., Rogers, M. S. & McConnell, D. J. (1984). Selection pressures on codon usage in the complete genome of bacteriophage T7. J. Mol. Evol. 21, 150-160.
    • (1984) J. Mol. Evol. , vol.21 , pp. 150-160
    • Sharp, P.M.1    Rogers, M.S.2    McConnell, D.J.3
  • 48
    • 0023634094 scopus 로고
    • Production of single-stranded plasmid DNA
    • Vieira, J. & Messing, J. (1987). Production of single-stranded plasmid DNA. Methods Enzymol. 153, 3-11.
    • (1987) Methods Enzymol. , vol.153 , pp. 3-11
    • Vieira, J.1    Messing, J.2
  • 50
    • 0025978976 scopus 로고
    • Man-made antibodies
    • Winter, G. & Milstein, C. (1991). Man-made antibodies. Nature, 349, 293-299.
    • (1991) Nature , vol.349 , pp. 293-299
    • Winter, G.1    Milstein, C.2
  • 52
    • 0025269097 scopus 로고
    • Specificity of Escherichia coli mutD and mutL mutator strains
    • Wu, T. H., Clarke, C. H. & Marinus, M. G. (1990). Specificity of Escherichia coli mutD and mutL mutator strains. Gene, 87, 1-5.
    • (1990) Gene , vol.87 , pp. 1-5
    • Wu, T.H.1    Clarke, C.H.2    Marinus, M.G.3
  • 55
    • 0028128577 scopus 로고
    • Development of antibody diversity in single germinal centers: Selective expansion of high-affinity variants
    • Ziegner, M., Steinhauser, G. & Berek, C. (1994). Development of antibody diversity in single germinal centers: selective expansion of high-affinity variants. Eur. J. Immunol. 24, 2393-2400.
    • (1994) Eur. J. Immunol. , vol.24 , pp. 2393-2400
    • Ziegner, M.1    Steinhauser, G.2    Berek, C.3


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