Primary Homology Assessment, Characters and Character States

Cladistics

Volumn 13, Issue 3, 1997, Pages 275-283

  Hawkins, Julie A ^a   Hughes, Colin E ^a   Scotland, Robert W ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

PAGRUS MAJOR;

EID: 0000470352     PISSN: 07483007     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1096-0031.1997.tb00320.x     Document Type: Review

References (36)

1. Ax, P. (1987). "The Phylogenetic System". John Wiley and Sons, Chichester.
2. Bateman, R. M., DiMichele, W. A., and Willard, D. A. (1992). Experimental cladistic analysis of anatomically preserved arborescent Lycopsids from the Carboniferous of Eurasia, an essay on palaeobotanical phylogenetics. Ann. Missouri Bot. Garden 79, 500-559.
3. Bock, W. J. (1969). Comparative morphology in systematics. In "Systematic Biology, Proceedings of an International Conference Conducted at the University of Michigan, Ann Arbour, Michigan, June 14-16, 1967", pp. 411-448. National Academy of Sciences, Washington.
4. Bock, W. J. (1974). Philosophical foundations of classical evolutionary classification. Syst. Zool. 22, 375-392.
5. Brady, R. H. (1983). Parsimony, hierarchy and biological implications. In "Proceedings of the Second Meeting of the Willi Hennig Society. Advances in Cladistics 2" (N. Platnick, and V. Funk, Eds), pp. 49-59. Columbia University Press, New York.
6. Brady, R. H. (1985). On the independence of systematics. Cladistics 1, 113-126.
7. Brady, R. H. (1994). Explanation, description, and the meaning of "transformation" in taxonomic evidence. In "Models in Phylogeny Construction. Systematics Association Special Volume 52" (R. W. Scotland, D. J. Siebert, and D. M. Williams, Eds), pp. 11-30. Clarendon Press, Oxford.
8. Brower, A. V. Z., and Schawaroch, V. (1996). Three steps of homology assessment. Cladistics 12, 265-272.
9. Bryant, H. N. (1989). An evaluation of cladistic and character analyses as hypothetico-deductive procedures, and the consequences for character weighting. Syst. Zool. 38, 214-227.
10. Coddington, J., and Scharf, N. (1994). Problems with zero-length branches. Cladistics 10, 415-423.
11. de Pinna, M. C. C. (1991). Concepts and tests of homology in the cladistic paradigm. Cladistics 7, 367-394.
12. Farris, J. S. (1983). The logical basis of phylogenetic analysis. In "Proceedings of the Second Meeting of the Willi Hennig Society. Advances in Cladistics 2" (N. Platnick, and V. Funk, Eds), pp. 7-36. Columbia University Press, New York.
13. Felsenstein, J. (1982). Numerical methods for inferring evolutionary trees. Quart. Rev. Biol. 57, 379-404.
14. Geoffroy Saint-Hilaire, E. (1830). "Principes de Philosophie Zoologique, discutés en Mars 1830, au Sein de l'Académie Royale des Sciences". Pichon et Dider, Paris.
15. Goloboff, P. A. (1995). Parsimony and weighting: A reply to Turner and Zandee. Cladistics 11, 91-104.
16. Grimes, J. (1995). Generic relationships of Mimosoideae tribe Ingeae, with emphasis on the New World Pithecellobium complex. In "Advances in Legume Systematics. Part 7. Phylogeny" (M. D. Crisp, and J. J. Doyle, Eds), pp. 101-121. Royal Botanic Gardens, Kew.
17. Hennig, W. (1966). "Phylogenetic Systematics". University of Illinois Press, Urbana, Illinois.
18. Jardine, N. (1969). The observational and theoretical components of homology: A study on the morphology of the dermal skull-roofs of rhipidistian fishes. Biol. J. Linnean Soc. 1, 327-361.
19. Maddison, W. P. (1993). Missing data versus missing characters in phylogenetic analysis. Syst. Biol. 42, 576-581.
20. Nelson, G. J. (1994). Homology and Systematics. In "Homology, the Hierarchical Basis of Comparative Biology" (B. K. Hall, Ed.), pp. 101-149. Academic Press, San Diego.
21. Patterson, C. (1982). Morphological characters and homology. In "Problems of Phylogenetic Reconstruction" (K. A. Joysey, and A. E. Friday, Eds), pp. 21-74. Academic Press, London and New York.
22. Patterson, C. (1988). Homology in classical and molecular biology. Mol. Biol. Evol. 5, 603-625.
23. Pimentel, R. A., and Riggins, R. (1987). The nature of cladistic data. Cladistics 3, 201-209.
24. Platnick, N. J. (1979). Philosophy and the transformation of cladistics. Syst. Zool. 28, 537-546.
25. Platnick, N. I., Griswold, C. E., and Coddington, J. A. (1991). On missing entries in cladistic analysis. Cladistics 7, 337-343.
26. Pleijel, F. (1995). On character coding for phylogeny reconstruction. Cladistics 11, 309-315.
27. Pogue, M. G., and Mickevich, M. F. (1990). Character definitions and character state delineation: The bête-noire of phylogenetic inference. Cladistics 6, 319-361.
28. Rieppel, O. (1988). "Fundamentals of Comparative Biology". Birkhauser Verlag, Berlin.
29. Riggins, R., and Farris, J. S. (1983). Cladistics and the roots of angiosperms. Syst. Bot. 8, 96-101.
30. Schoch, R. M. (1986). "Phylogeny Reconstruction in Paleontology". Van Norstrand-Reinhold, New York.
31. Scotland, R. W., and Williams, D. M. (1993). Multistate characters and cladograms: When are two stamens more similar to three stamens than to four? A reply to Lipscomb. Cladistics 9, 343-350.
32. Smith, A. (1994). "Systematics and the Fossil Record: Documenting Evolutionary Pathways". Blackwell Scientific, Oxford.
33. Stevens, P. F. (1991). Character states, morphological variation and phylogenetic analysis: A review. Syst. Bot. 16, 553-583.
34. Wiley, E. O. (1981). "Phylogenetics. The Theory and Practice of Phylogenetic Systematics". John Wiley and Sons, New York.
35. Wilkinson, M. (1995a). A comparison of two methods of character construction. Cladistics 11, 297-308.
36. Wilkinson, M. (1995b). Arbitrary resolutions, missing entries, and the problem of zero-length branches in parsimony analysis. Syst. Biol. 44, 108-111.