메뉴 건너뛰기




Volumn 15, Issue 5, 1996, Pages 297-336

Indirect mass spectrometric methods for characterizing and sequencing oligonucleotides

Author keywords

[No Author keywords available]

Indexed keywords


EID: 0000390381     PISSN: 02777037     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1098-2787(1996)15:5<297::AID-MAS2>3.0.CO;2-D     Document Type: Article
Times cited : (115)

References (95)
  • 1
    • 0027569925 scopus 로고
    • Antisense DNA oligo" nucleotides I: The use of ionspray tandem mass spectrometry for the sequence verification of methylphosphonate oligodeoxyribonucleotides
    • Baker, T. R.; Keough, T.; Dobson, R. L. M.; Riley, T. A.; Hasselfield, J. A.; Hesselberth, P. E. "Antisense DNA oligo" nucleotides I: The use of ionspray tandem mass spectrometry for the sequence verification of methylphosphonate oligodeoxyribonucleotides," Rapid Commun. Mass Spectrom. 1993, 7, 190-194.
    • (1993) Rapid Commun. Mass Spectrom. , vol.7 , pp. 190-194
    • Baker, T.R.1    Keough, T.2    Dobson, R.L.M.3    Riley, T.A.4    Hasselfield, J.A.5    Hesselberth, P.E.6
  • 2
    • 0029025875 scopus 로고
    • Mass and sequence verification of modified oligonucleotides using electrospray tandem mass spectrometry
    • Barry, J. P.; Vouros, P.; Schepdael, A. V.; Law, S.-J. "Mass and sequence verification of modified oligonucleotides using electrospray tandem mass spectrometry," J. Mass Spectrom. 1995, 30, 993-1006.
    • (1995) J. Mass Spectrom. , vol.30 , pp. 993-1006
    • Barry, J.P.1    Vouros, P.2    Schepdael, A.V.3    Law, S.-J.4
  • 4
    • 0030201121 scopus 로고    scopus 로고
    • Oligonucleotide sequence and composition determined by matrix-assisted laser desorption/ionization
    • Bentzley, C. M.; Johnston, M. V.; Larsen, B. S.; Gutteridge, S. "Oligonucleotide sequence and composition determined by matrix-assisted laser desorption/ionization," Anal. Chem. 1996, 68, 2141-2146.
    • (1996) Anal. Chem. , vol.68 , pp. 2141-2146
    • Bentzley, C.M.1    Johnston, M.V.2    Larsen, B.S.3    Gutteridge, S.4
  • 5
    • 0029691295 scopus 로고    scopus 로고
    • Electrospray tandem mass spectrometry of nucleotides
    • Boschenok, J.; Sheil, M. M. "Electrospray tandem mass spectrometry of nucleotides," Rapid Commun. Mass Spectrom. 1996, 10, 144-149.
    • (1996) Rapid Commun. Mass Spectrom. , vol.10 , pp. 144-149
    • Boschenok, J.1    Sheil, M.M.2
  • 7
    • 0027492777 scopus 로고
    • 5S rRNA modification in the hyperthermophilic archaea Sulfolobus solfataricus and pyrodictium occultum
    • Bruenger, E.; Kowalak, J. A.; Kuchino, Y.; McCloskey, J. A.; Mizushima, H.; Stetter, K. O.; Grain, P. F. "5S rRNA modification in the hyperthermophilic archaea Sulfolobus solfataricus and pyrodictium occultum," FASEB J. 1993, 7, 196-200.
    • (1993) FASEB J. , vol.7 , pp. 196-200
    • Bruenger, E.1    Kowalak, J.A.2    Kuchino, Y.3    McCloskey, J.A.4    Mizushima, H.5    Stetter, K.O.6    Grain, P.F.7
  • 8
    • 0029739851 scopus 로고    scopus 로고
    • Peptide nucleic acid characterization by MALDI-TOF mass spectrometry
    • Butler, J. M.; Jiang-Baucom, P.; Huang, M.; Belgrader, P.; Girard, J. "Peptide nucleic acid characterization by MALDI-TOF mass spectrometry," Anal. Chem. 1996, 68, 3283-3287.
    • (1996) Anal. Chem. , vol.68 , pp. 3283-3287
    • Butler, J.M.1    Jiang-Baucom, P.2    Huang, M.3    Belgrader, P.4    Girard, J.5
  • 9
    • 0022498663 scopus 로고
    • Fast atom bombardment combined with tandem mass spectrometry for the study of dinucleotides
    • Cerny, R. L.; Gross, M. L.; Grotjahn, L. "Fast atom bombardment combined with tandem mass spectrometry for the study of dinucleotides," Anal. Biochem. 1986, 156, 424-435.
    • (1986) Anal. Biochem. , vol.156 , pp. 424-435
    • Cerny, R.L.1    Gross, M.L.2    Grotjahn, L.3
  • 10
    • 0023187427 scopus 로고
    • Fast atom bombardment combined with tandem mass spectrometry for determining structures of small oligonucleotides
    • Cerny, R. L.; Tomer, K. B.; Gross, M. L.; Grotjahn, L. "Fast atom bombardment combined with tandem mass spectrometry for determining structures of small oligonucleotides," Anal. Biochem. 1987, 165, 175-182.
    • (1987) Anal. Biochem. , vol.165 , pp. 175-182
    • Cerny, R.L.1    Tomer, K.B.2    Gross, M.L.3    Grotjahn, L.4
  • 11
    • 0028981485 scopus 로고
    • Detection of ΔF508 mutation of the cystic fibrosis gene by matrix-assisted laser desorption/ionization mass spectrometry
    • Ch'ang, L. Y.; Tang, K.; Schell, M.; Ringelberg, C.; Matteson, K. J.; Allman, S. L.; Chen, C. H. "Detection of ΔF508 mutation of the cystic fibrosis gene by matrix-assisted laser desorption/ionization mass spectrometry," Rapid Commun. Mass Spectrom. 1995, 9, 772-774.
    • (1995) Rapid Commun. Mass Spectrom. , vol.9 , pp. 772-774
    • Ch'ang, L.Y.1    Tang, K.2    Schell, M.3    Ringelberg, C.4    Matteson, K.J.5    Allman, S.L.6    Chen, C.H.7
  • 12
    • 0030123298 scopus 로고    scopus 로고
    • MALDI for fast DNA analysis and sequencing
    • Chen, C. H.; Taranenko, N. I.; Zhu, Y.; Allman, S. L. "MALDI for fast DNA analysis and sequencing," LRA 1996, 8, 87-99.
    • (1996) LRA , vol.8 , pp. 87-99
    • Chen, C.H.1    Taranenko, N.I.2    Zhu, Y.3    Allman, S.L.4
  • 13
    • 0002958608 scopus 로고
    • Mass spectrometry for the analysis of carcinogen-DNA adducts
    • Chiarelli, M. P.; Lay, J. O. "Mass spectrometry for the analysis of carcinogen-DNA adducts," Mass Spectrom. Rev. 1992, 11, 447-493.
    • (1992) Mass Spectrom. Rev. , vol.11 , pp. 447-493
    • Chiarelli, M.P.1    Lay, J.O.2
  • 14
    • 0029117357 scopus 로고
    • Collision-induced dissociation: Readings and commentary
    • Cooks, G. R. "Collision-induced dissociation: Readings and commentary," J. Mass Spectrom. 1995, 30, 1215-1221.
    • (1995) J. Mass Spectrom. , vol.30 , pp. 1215-1221
    • Cooks, G.R.1
  • 15
    • 0001374853 scopus 로고
    • Mass spectrometric techniques in nucleic acid research
    • Grain, P. F. "Mass spectrometric techniques in nucleic acid research," Mass Spectrom. Rev. 1990, 9, 505-554.
    • (1990) Mass Spectrom. Rev. , vol.9 , pp. 505-554
    • Grain, P.F.1
  • 17
    • 0029128485 scopus 로고
    • Mass spectrometry of nucleic acids: The promise of matrix-assisted laser desorption-ionization (MALDI) mass spectrometry
    • Fitzgerald, M. C.; Smith, L. M. "Mass spectrometry of nucleic acids: The promise of matrix-assisted laser desorption-ionization (MALDI) mass spectrometry," Annu. Rev. Biophys. Biomol. Struct. 1995, 24, 117-140.
    • (1995) Annu. Rev. Biophys. Biomol. Struct. , vol.24 , pp. 117-140
    • Fitzgerald, M.C.1    Smith, L.M.2
  • 18
    • 84990647399 scopus 로고
    • The analysis of mock DNA sequencing reactions using matrix-assisted laser desorption/ionization mass spectrometry
    • Fitzgerald, M. C.; Zhu, L.; Smith, L. M. "The analysis of mock DNA sequencing reactions using matrix-assisted laser desorption/ionization mass spectrometry," Rapid Commun. Mass Spectrom. 1993, 7, 895-897.
    • (1993) Rapid Commun. Mass Spectrom. , vol.7 , pp. 895-897
    • Fitzgerald, M.C.1    Zhu, L.2    Smith, L.M.3
  • 19
    • 0024283277 scopus 로고
    • DNA and RNA sequence determination based on phosphorothioate chemistry
    • Gish, G.; Eckstein, F. "DNA and RNA sequence determination based on phosphorothioate chemistry," Science 1988, 240, 1520-1522.
    • (1988) Science , vol.240 , pp. 1520-1522
    • Gish, G.1    Eckstein, F.2
  • 20
    • 0029188041 scopus 로고
    • Sequencing of oligonucleotides using high performance liquid chromatography and electrospray mass spectrometry
    • Glover, R. P.; Sweetman, G. M. A.; Farmer, P. B.; Roberts, G. C. K. "Sequencing of oligonucleotides using high performance liquid chromatography and electrospray mass spectrometry," Rapid Commun. Mass Spectrom. 1995, 9, 897-901.
    • (1995) Rapid Commun. Mass Spectrom. , vol.9 , pp. 897-901
    • Glover, R.P.1    Sweetman, G.M.A.2    Farmer, P.B.3    Roberts, G.C.K.4
  • 21
    • 0029194414 scopus 로고
    • Utility of organic bases for improved electrospray mass spectrometry of oligonucleotides
    • Greig, M.; Griffey, R. H. "Utility of organic bases for improved electrospray mass spectrometry of oligonucleotides," Rapid Commun. Mass Spectrom. 1995, 9, 97-102.
    • (1995) Rapid Commun. Mass Spectrom. , vol.9 , pp. 97-102
    • Greig, M.1    Griffey, R.H.2
  • 22
    • 0020480473 scopus 로고
    • Ultrafast sequencing of oligodeoxyribonucleotides by FAB-mass spectrometry
    • Grotjahn, L.; Frank, R.; Bloecker, H. "Ultrafast sequencing of oligodeoxyribonucleotides by FAB-mass spectrometry," Nucleic Acids Res. 1982, 10, 4671-4678.
    • (1982) Nucleic Acids Res. , vol.10 , pp. 4671-4678
    • Grotjahn, L.1    Frank, R.2    Bloecker, H.3
  • 23
    • 0000677052 scopus 로고
    • Ion trap collisional activation of the deprotonated deoxymononucleoside and deoxydinucleoside monophosphates
    • Habibi-Goudarzi, S.; McLuckey, S. A. "Ion trap collisional activation of the deprotonated deoxymononucleoside and deoxydinucleoside monophosphates," J. Am. Soc. Mass Spectrom. 1995, 6, 102-113.
    • (1995) J. Am. Soc. Mass Spectrom. , vol.6 , pp. 102-113
    • Habibi-Goudarzi, S.1    McLuckey, S.A.2
  • 24
    • 0007493591 scopus 로고
    • A new method for sequence determination of large oligonucleotides
    • Holley, R. W.; Madison, J. T.; Zamir, A. "A new method for sequence determination of large oligonucleotides," Biochem. Biophys. Res. Commun. 1964, 17, 389-394.
    • (1964) Biochem. Biophys. Res. Commun. , vol.17 , pp. 389-394
    • Holley, R.W.1    Madison, J.T.2    Zamir, A.3
  • 25
  • 26
    • 0030019589 scopus 로고    scopus 로고
    • Detection of bacterial DNA polymerase chain reaction products by matrix-assisted laser desorption/ionization mass spectrometry
    • Hurst, G. B.; Doktycz, M. J.; Vass, A. A.; Buchanan, M. V. "Detection of bacterial DNA polymerase chain reaction products by matrix-assisted laser desorption/ionization mass spectrometry," Rapid Commun. Mass Spectrom. 1996, 10, 377-382.
    • (1996) Rapid Commun. Mass Spectrom. , vol.10 , pp. 377-382
    • Hurst, G.B.1    Doktycz, M.J.2    Vass, A.A.3    Buchanan, M.V.4
  • 27
    • 0028675623 scopus 로고
    • A new mass spectrometric approach to detect modifications in DNA
    • Janning, P.; Schrader, W.; Linscheid, M. "A new mass spectrometric approach to detect modifications in DNA," Rapid Commun. Mass Spectrom. 1994, 8, 1035-1040.
    • (1994) Rapid Commun. Mass Spectrom. , vol.8 , pp. 1035-1040
    • Janning, P.1    Schrader, W.2    Linscheid, M.3
  • 28
    • 0029927530 scopus 로고    scopus 로고
    • Applications of delayed extraction matrix-assisted laser desorption ionization time-of-flight mass spectrometry to oligonucleotide analysis
    • Juhasz, P.; Roskey, M. T.; Smirnov, I. P.; Haff, L. A.; Vestal, M. L.; Martin, S. A. "Applications of delayed extraction matrix-assisted laser desorption ionization time-of-flight mass spectrometry to oligonucleotide analysis," Anal. Chem. 1996, 68, 941-946.
    • (1996) Anal. Chem. , vol.68 , pp. 941-946
    • Juhasz, P.1    Roskey, M.T.2    Smirnov, I.P.3    Haff, L.A.4    Vestal, M.L.5    Martin, S.A.6
  • 30
    • 0027564020 scopus 로고
    • Antisense DNA oligonucleotides II: The use of matrix-assisted laser desorption/ionization mass spectrometry for the sequence verification of methylphosphonate oligodeoxyribonucleotides
    • Keough, T.; Baker, T. R.; Dobson, R. L. M.; Lacey, M. P.; Riley, T. A.; Hasselfield, J. A.; Hesselberth, P. E. "Antisense DNA oligonucleotides II: The use of matrix-assisted laser desorption/ionization mass spectrometry for the sequence verification of methylphosphonate oligodeoxyribonucleotides," Rapid Commun. Mass Spectrom. 1993, 7, 195-200.
    • (1993) Rapid Commun. Mass Spectrom. , vol.7 , pp. 195-200
    • Keough, T.1    Baker, T.R.2    Dobson, R.L.M.3    Lacey, M.P.4    Riley, T.A.5    Hasselfield, J.A.6    Hesselberth, P.E.7
  • 33
    • 0029163938 scopus 로고
    • 7-Deaza purine bases offer a higher ion stability in the analysis of DNA by matrix-assisted laser desorption/ionization mass spectrometry
    • Kirpekar, F.; Nordhoff, E.; Kristiansen, K.; Roepstorff, P.; Hahner, S.; Hillenkamp, F. "7-Deaza purine bases offer a higher ion stability in the analysis of DNA by matrix-assisted laser desorption/ionization mass spectrometry," Rapid Commun. Mass Spectrom. 1995, 9, 525-531.
    • (1995) Rapid Commun. Mass Spectrom. , vol.9 , pp. 525-531
    • Kirpekar, F.1    Nordhoff, E.2    Kristiansen, K.3    Roepstorff, P.4    Hahner, S.5    Hillenkamp, F.6
  • 34
    • 0029883720 scopus 로고    scopus 로고
    • Structural characterization of U*-1915 in domain IV from Escherichia coli 23S ribosomal RNA as 3-methylpseudouridine
    • Kowalak, J. A.; Bruenger, E.; Hashizume, T.; Peltier, J. M.; Ofengand, J.; McCloskey, J. A. "Structural characterization of U*-1915 in domain IV from Escherichia coli 23S ribosomal RNA as 3-methylpseudouridine," Nucleic Acids Res. 1996, 24, 688-693.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 688-693
    • Kowalak, J.A.1    Bruenger, E.2    Hashizume, T.3    Peltier, J.M.4    Ofengand, J.5    McCloskey, J.A.6
  • 35
    • 0029026068 scopus 로고
    • Post-transcriptional modification of the central loop of domain V in E. coli 23S ribosomal RNA
    • Kowalak, J. A.; Bruenger, E. B.; McCloskey, J. A. "Post-transcriptional modification of the central loop of domain V in E. coli 23S ribosomal RNA," J. Biol. Chem. 1995, 270, 17758-17764.
    • (1995) J. Biol. Chem. , vol.270 , pp. 17758-17764
    • Kowalak, J.A.1    Bruenger, E.B.2    McCloskey, J.A.3
  • 36
    • 0028272470 scopus 로고
    • Role of post-transcriptional modification in stabilization of transfer RNA from hyperthermophiles
    • Kowalak, J. A.; Dalluge, J. J.; McCloskey, J. A.; Stetter, K. O. "Role of post-transcriptional modification in stabilization of transfer RNA from hyperthermophiles," Biochemistry 1994, 33, 7869-7876.
    • (1994) Biochemistry , vol.33 , pp. 7869-7876
    • Kowalak, J.A.1    Dalluge, J.J.2    McCloskey, J.A.3    Stetter, K.O.4
  • 37
    • 0027423649 scopus 로고
    • A novel method for the determination of post-transcriptional modification in RNA by mass spectrometry
    • Kowalak, J. A.; Pomerantz, S. C.; Crain, P. F.; McCloskey, J. A. "A novel method for the determination of post-transcriptional modification in RNA by mass spectrometry," Nucleic Acids Res. 1993, 21, 4577-4585.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 4577-4585
    • Kowalak, J.A.1    Pomerantz, S.C.2    Crain, P.F.3    McCloskey, J.A.4
  • 38
    • 0000181583 scopus 로고
    • Enzymatic sequencing of oligonucleotides with electrospray mass spec-trometry
    • Limbach, P. A.; Crain, P. F.; McCloskey, J. A. "Enzymatic sequencing of oligonucleotides with electrospray mass spec-trometry," Nucleic Acids Res. Symp. Ser. 1994a, 31, 127-128.
    • (1994) Nucleic Acids Res. Symp. Ser. , vol.31 , pp. 127-128
    • Limbach, P.A.1    Crain, P.F.2    McCloskey, J.A.3
  • 39
    • 0001962888 scopus 로고
    • Molecular mass measurement of intact ribonucleic acids via electrospray ionization quadrupole mass spectrometry
    • Limbach, P. A.; Crain, P. F.; McCloskey, J. A. "Molecular mass measurement of intact ribonucleic acids via electrospray ionization quadrupole mass spectrometry," J. Am. Soc. Mass Spectrom. 1995, 6, 27-39.
    • (1995) J. Am. Soc. Mass Spectrom. , vol.6 , pp. 27-39
    • Limbach, P.A.1    Crain, P.F.2    McCloskey, J.A.3
  • 41
    • 0029911204 scopus 로고    scopus 로고
    • Sequence information from 42-108-mer DNAs (complete for a 50-mer) by tandem mass spectrometry
    • Little, D. P.; Aaserud, D. J.; Valaskovic, G. A.; McLafferty, F. W. "Sequence information from 42-108-mer DNAs (complete for a 50-mer) by tandem mass spectrometry," J. Am. Chem. Soc. 1996, 118, 9352-9359.
    • (1996) J. Am. Chem. Soc. , vol.118 , pp. 9352-9359
    • Little, D.P.1    Aaserud, D.J.2    Valaskovic, G.A.3    McLafferty, F.W.4
  • 43
    • 0028801604 scopus 로고
    • Sequencing 50-mer DNAs using electrospray tandem mass spectrometry and complementary fragmentation methods
    • Little, D. P.; McLafferty, F. W. "Sequencing 50-mer DNAs using electrospray tandem mass spectrometry and complementary fragmentation methods," J. Am. Chem. Soc. 1995, 117, 6783-6784.
    • (1995) J. Am. Chem. Soc. , vol.117 , pp. 6783-6784
    • Little, D.P.1    McLafferty, F.W.2
  • 44
    • 0027997748 scopus 로고
    • Infrared multiphoton dissociation of large multiply charged ions for biomolecule sequencing
    • Little, D. P.; Speir, J. P.; Senko, M. W.; O'Conner, P. B.; McLafferty, F. W. "Infrared multiphoton dissociation of large multiply charged ions for biomolecule sequencing," Anal. Chem. 1994b, 66, 2809-2815.
    • (1994) Anal. Chem. , vol.66 , pp. 2809-2815
    • Little, D.P.1    Speir, J.P.2    Senko, M.W.3    O'Conner, P.B.4    McLafferty, F.W.5
  • 45
    • 0028920242 scopus 로고
    • Verification of 50- to 100-mer DNA and RNA sequences with high-resolution mass spectrometry
    • Little, D. P.; Thannhauser, T. W.; McLafferty, F. W. "Verification of 50- to 100-mer DNA and RNA sequences with high-resolution mass spectrometry," Proc. Natl. Acad. Sci. USA 1995, 92, 2318-2322.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 2318-2322
    • Little, D.P.1    Thannhauser, T.W.2    McLafferty, F.W.3
  • 47
    • 0029380347 scopus 로고
    • Use of a nitrocellulose film substrate in matrix-assisted laser desorption/ionization mass spectrometry for DNA mapping and screening
    • Liu, Y.-H.; Bai, J.; Liang, X.; Lubman, D. M.; Venta, P. J. "Use of a nitrocellulose film substrate in matrix-assisted laser desorption/ionization mass spectrometry for DNA mapping and screening," Anal. Chem. 1995a, 67, 3482-3490.
    • (1995) Anal. Chem. , vol.67 , pp. 3482-3490
    • Liu, Y.-H.1    Bai, J.2    Liang, X.3    Lubman, D.M.4    Venta, P.J.5
  • 48
    • 0028878439 scopus 로고
    • Rapid screening of genetic polymorphisms using buccal cell DNA with detection by matrix-assisted laser desorption/ionization mass spectrometry
    • Liu, Y.-H.; Bai, J.; Zhu, Y.; Liang, X.; Siemieniak, D.; Venta, P. J.; Lubman, D. M. "Rapid screening of genetic polymorphisms using buccal cell DNA with detection by matrix-assisted laser desorption/ionization mass spectrometry," Rapid Commun. Mass Spectrom. 1995b, 9, 735-743.
    • (1995) Rapid Commun. Mass Spectrom. , vol.9 , pp. 735-743
    • Liu, Y.-H.1    Bai, J.2    Zhu, Y.3    Liang, X.4    Siemieniak, D.5    Venta, P.J.6    Lubman, D.M.7
  • 50
    • 0018846636 scopus 로고
    • Sequencing end-labeled DNA with base-specific chemical cleavages
    • Maxam, A. M.; Gilbert, W. "Sequencing end-labeled DNA with base-specific chemical cleavages," Meth. Enzym. 1980, 65, 499-560.
    • (1980) Meth. Enzym. , vol.65 , pp. 499-560
    • Maxam, A.M.1    Gilbert, W.2
  • 51
    • 0000390617 scopus 로고
    • Progress in mass spectrometry of nucleic acid constituents: Analysis of xenobiotic modifications and measurements at high mass
    • McCloskey, J. A.; Crain, P. F. "Progress in mass spectrometry of nucleic acid constituents: Analysis of xenobiotic modifications and measurements at high mass," Int. J. Mass Spectrom. Ion Proc. 1992, 118/119, 593-615.
    • (1992) Int. J. Mass Spectrom. Ion Proc. , vol.118-119 , pp. 593-615
    • McCloskey, J.A.1    Crain, P.F.2
  • 52
    • 0000529864 scopus 로고
    • Decompositions of multiply charged oligonucleotide anions
    • McLuckey, S. A.; Habibi-Goudarzi, S. "Decompositions of multiply charged oligonucleotide anions," J. Am. Chem. Soc. 1993, 115, 12085-12095.
    • (1993) J. Am. Chem. Soc. , vol.115 , pp. 12085-12095
    • McLuckey, S.A.1    Habibi-Goudarzi, S.2
  • 53
    • 44049123270 scopus 로고
    • Tandem mass spectrometry of small, multiply charged oligonucleotides
    • McLuckey, S. A.; Van Berkel, G. J.; Glish, G. L. "Tandem mass spectrometry of small, multiply charged oligonucleotides," J. Am. Soc. Mass Spectrom. 1992, 3, 60-70.
    • (1992) J. Am. Soc. Mass Spectrom. , vol.3 , pp. 60-70
    • McLuckey, S.A.1    Van Berkel, G.J.2    Glish, G.L.3
  • 54
    • 0029164899 scopus 로고
    • Charged vs. neutral nucleobase loss from multiply charged oligonucleotide anions
    • McLuckey, S. A.; Viadyanathan, G.; Habibi-Goudarzi, S. "Charged vs. neutral nucleobase loss from multiply charged oligonucleotide anions," J. Mass Spectrom. 1995, 30, 1222-1229.
    • (1995) J. Mass Spectrom. , vol.30 , pp. 1222-1229
    • McLuckey, S.A.1    Viadyanathan, G.2    Habibi-Goudarzi, S.3
  • 55
    • 0029864552 scopus 로고    scopus 로고
    • Analyzing sequencing reactions from bacteriophage M13 by matrix-assisted laser desorption/ionization mass spectrometry
    • Mouradian, S.; Rank, D. R.; Smith, L. M. "Analyzing sequencing reactions from bacteriophage M13 by matrix-assisted laser desorption/ionization mass spectrometry," Rapid Commun. Mass Spectrom. 1996, 10, 1475-1478.
    • (1996) Rapid Commun. Mass Spectrom. , vol.10 , pp. 1475-1478
    • Mouradian, S.1    Rank, D.R.2    Smith, L.M.3
  • 57
    • 0029176607 scopus 로고
    • Molecular mass measurement of polymerase chain reaction products amplified from human blood DNA by electrospray ionization mass spectrometry
    • Naito, Y.; Ishikawa, K.; Koga, Y.; Tsuneyoshi, T.; Terunuma, H.; Arakawa, R. "Molecular mass measurement of polymerase chain reaction products amplified from human blood DNA by electrospray ionization mass spectrometry," Rapid Commun. Mass Spectrom. 1995, 9, 1484-1486.
    • (1995) Rapid Commun. Mass Spectrom. , vol.9 , pp. 1484-1486
    • Naito, Y.1    Ishikawa, K.2    Koga, Y.3    Tsuneyoshi, T.4    Terunuma, H.5    Arakawa, R.6
  • 58
    • 0023716359 scopus 로고
    • Direct sequencing of polymerase chain reaction amplified DNA fragments through the incorporation of deoxynucleoside α-thiophosphates
    • Nakamaye, K. L.; Gish, G.; Eckstein, F.; Vosberg, H. P. "Direct sequencing of polymerase chain reaction amplified DNA fragments through the incorporation of deoxynucleoside α-thiophosphates," Nucleic Acids Res. 1988, 16, 9947-9959.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 9947-9959
    • Nakamaye, K.L.1    Gish, G.2    Eckstein, F.3    Vosberg, H.P.4
  • 59
    • 0030200945 scopus 로고    scopus 로고
    • Interpretation of oligonucleotide mass spectra for determination of sequence using electrospray ionization and tandem mass spectrometry
    • Ni, J.; Pomerantz, S. C.; Rozenski, J.; Zhang, Y.; McCloskey, J. A. "Interpretation of oligonucleotide mass spectra for determination of sequence using electrospray ionization and tandem mass spectrometry," Anal. Chem. 1996, 68, 1989-1999.
    • (1996) Anal. Chem. , vol.68 , pp. 1989-1999
    • Ni, J.1    Pomerantz, S.C.2    Rozenski, J.3    Zhang, Y.4    McCloskey, J.A.5
  • 61
    • 0028836940 scopus 로고
    • Direct mass spectrometric sequencing of low pmol amounts of oligodeoxynucleotides up to 21 bases by matrix-assisted laser desorption/ionization mass spectrometry
    • Nordhoff, E.; Karas, M.; Cramer, R.; Hahner, S.; Hillenkamp, F.; Lezius, A.; Kirpekar, F.; Kristiansen, K.; Muth, J.; Meier, C.; Engels, J. W. "Direct mass spectrometric sequencing of low pmol amounts of oligodeoxynucleotides up to 21 bases by matrix-assisted laser desorption/ionization mass spectrometry," J. Mass Spectrom. 1995, 30, 99-112.
    • (1995) J. Mass Spectrom. , vol.30 , pp. 99-112
    • Nordhoff, E.1    Karas, M.2    Cramer, R.3    Hahner, S.4    Hillenkamp, F.5    Lezius, A.6    Kirpekar, F.7    Kristiansen, K.8    Muth, J.9    Meier, C.10    Engels, J.W.11
  • 63
    • 0038200794 scopus 로고
    • A comprehensive study of the low-energy collision-induced dissociation of dinucleoside monophosphates
    • Phillips, D. R.; McCloskey, J. A. "A comprehensive study of the low-energy collision-induced dissociation of dinucleoside monophosphates," Int. J. Mass Spectrom. Ion Proc. 1993, 128, 61-82.
    • (1993) Int. J. Mass Spectrom. Ion Proc. , vol.128 , pp. 61-82
    • Phillips, D.R.1    McCloskey, J.A.2
  • 64
    • 0027240210 scopus 로고
    • Matrix-assisted laser desorption ionization time-of-flight mass spectrometry: A powerful tool for the mass and sequence analysis of natural and modified oligonucleotides
    • Pieles, U.; Zürcher, W.; Schär, M.; Moser, H. E. "Matrix-assisted laser desorption ionization time-of-flight mass spectrometry: A powerful tool for the mass and sequence analysis of natural and modified oligonucleotides," Nucleic Acids Res. 1993, 21, 3191-3196.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 3191-3196
    • Pieles, U.1    Zürcher, W.2    Schär, M.3    Moser, H.E.4
  • 65
    • 0001181082 scopus 로고    scopus 로고
    • Chemical sequencing of phosphorothioate oligonucleotides using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    • Polo, L. M.; McCarley, T. D.; Limbach, P. A. "Chemical sequencing of phosphorothioate oligonucleotides using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry," Anal. Chem. 1997, 69, 1107-1112.
    • (1997) Anal. Chem. , vol.69 , pp. 1107-1112
    • Polo, L.M.1    McCarley, T.D.2    Limbach, P.A.3
  • 66
    • 33845594472 scopus 로고
    • Determination of oligonucleotide composition from mass spectrometrically measured molecular weight
    • Pomerantz, S. C.; Kowalak, J. A.; McCloskey, J. A. "Determination of oligonucleotide composition from mass spectrometrically measured molecular weight," J. Am. Soc. Mass Spectrom. 1993, 4, 204-209.
    • (1993) J. Am. Soc. Mass Spectrom. , vol.4 , pp. 204-209
    • Pomerantz, S.C.1    Kowalak, J.A.2    McCloskey, J.A.3
  • 67
    • 33749248364 scopus 로고
    • Low-energy collision-induced dissociation of deprotonated dinucleotides: Determination of the energetically favored dissociation pathways and the relative acidities of the nucleic acid bases
    • Rodgers, M. T.; Campbell, S.; Marzluff, E. M.; Beauchamp, J. L. "Low-energy collision-induced dissociation of deprotonated dinucleotides: determination of the energetically favored dissociation pathways and the relative acidities of the nucleic acid bases," Int. J. Mass Spectrom. Ion Proc. 1994, 137, 121-149.
    • (1994) Int. J. Mass Spectrom. Ion Proc. , vol.137 , pp. 121-149
    • Rodgers, M.T.1    Campbell, S.2    Marzluff, E.M.3    Beauchamp, J.L.4
  • 68
    • 2442674766 scopus 로고
    • Site-specific protonation directs low-energy dissociation pathways of dinucleotides in the gas phase
    • Rodgers, M. T.; Campbell, S.; Marzluff, E. M.; Beauchamp, J. L. "Site-specific protonation directs low-energy dissociation pathways of dinucleotides in the gas phase," Int. J. Mass Spectrom. Ion Proc. 1995, 148, 1-23.
    • (1995) Int. J. Mass Spectrom. Ion Proc. , vol.148 , pp. 1-23
    • Rodgers, M.T.1    Campbell, S.2    Marzluff, E.M.3    Beauchamp, J.L.4
  • 69
    • 84987419408 scopus 로고
    • Proposal for a common nomenclature for sequence ions in mass spectra of peptides
    • Roepstorff, P. "Proposal for a common nomenclature for sequence ions in mass spectra of peptides," Biomed. Mass Spectrom. 1984, 11, 601.
    • (1984) Biomed. Mass Spectrom. , vol.11 , pp. 601
    • Roepstorff, P.1
  • 70
    • 0030047433 scopus 로고    scopus 로고
    • DNA sequencing by delayed extraction-matrix-assisted laser desorption/ionization time of flight mass spectrometry
    • Roskey, M. T.; Juhasz, P.; Smirnov, I. P.; Takach, E. J.; Martin, S. A.; Haff, L. A. "DNA sequencing by delayed extraction-matrix-assisted laser desorption/ionization time of flight mass spectrometry," Proc. Natl. Acad. Sci. USA 1996, 93, 4724-4729.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 4724-4729
    • Roskey, M.T.1    Juhasz, P.2    Smirnov, I.P.3    Takach, E.J.4    Martin, S.A.5    Haff, L.A.6
  • 72
    • 0029073182 scopus 로고
    • Increased stability of nucleic acids containing 7-deaza-guanosine and 7-deaza-adenosine may enable rapid DNA sequencing by matrix-assisted laser/desorption mass spectrometry
    • Schneider, K.; Chait, B. "Increased stability of nucleic acids containing 7-deaza-guanosine and 7-deaza-adenosine may enable rapid DNA sequencing by matrix-assisted laser/desorption mass spectrometry," Nucleic Acids Res. 1995, 23, 1570-1575.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 1570-1575
    • Schneider, K.1    Chait, B.2
  • 73
    • 0028867238 scopus 로고
    • Sequence analysis of phosphorothioate oligonucleotides via matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    • Schuette, J. M.; Pieles, U.; Maleknia, S. D.; Srivatsa, G. S.; Cole, D. L.; Moser, H. E.; Afeyan, N. B. "Sequence analysis of phosphorothioate oligonucleotides via matrix-assisted laser desorption ionization time-of-flight mass spectrometry," J. Pharmaceut. Biomed. Anal. 1995, 13, 1195-1203.
    • (1995) J. Pharmaceut. Biomed. Anal. , vol.13 , pp. 1195-1203
    • Schuette, J.M.1    Pieles, U.2    Maleknia, S.D.3    Srivatsa, G.S.4    Cole, D.L.5    Moser, H.E.6    Afeyan, N.B.7
  • 74
    • 0028796545 scopus 로고
    • Analysis of enzymatic DNA sequencing reactions by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    • Shaler, T. A.; Tan, Y.; Wickham, J. N.; Wu, K. J.; Becker, C. H. "Analysis of enzymatic DNA sequencing reactions by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry," Rapid Commun. Mass Spectrom. 1995, 9, 942-947.
    • (1995) Rapid Commun. Mass Spectrom. , vol.9 , pp. 942-947
    • Shaler, T.A.1    Tan, Y.2    Wickham, J.N.3    Wu, K.J.4    Becker, C.H.5
  • 75
    • 0015493356 scopus 로고
    • Acidic hydrolysis of deoxycytidine and deoxyuridine derivatives. The general mechanism of deoxyribonucleoside hydrolysis
    • Shapiro, R.; Danzig, M. "Acidic hydrolysis of deoxycytidine and deoxyuridine derivatives. The general mechanism of deoxyribonucleoside hydrolysis," Biochem. 1972, 11, 23-29.
    • (1972) Biochem. , vol.11 , pp. 23-29
    • Shapiro, R.1    Danzig, M.2
  • 76
    • 0001547257 scopus 로고
    • Collisional activation and dissociation of polyatomic ions
    • Shukla, A. K.; Futrell, J. H. "Collisional activation and dissociation of polyatomic ions," Mass Spectrom. Rev. 1993, 12, 211-255.
    • (1993) Mass Spectrom. Rev. , vol.12 , pp. 211-255
    • Shukla, A.K.1    Futrell, J.H.2
  • 77
    • 0029997988 scopus 로고    scopus 로고
    • Sequencing oligonucleotides by exonuclease digestion and delayed extraction matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    • Smirnov, I. P.; Roskey, M. T.; Juhasz, P.; Takach, E. J.; Martin, S. A.; Haff, L. A. "Sequencing oligonucleotides by exonuclease digestion and delayed extraction matrix-assisted laser desorption ionization time-of-flight mass spectrometry," Anal. Biochem. 1996, 238, 19-25.
    • (1996) Anal. Biochem. , vol.238 , pp. 19-25
    • Smirnov, I.P.1    Roskey, M.T.2    Juhasz, P.3    Takach, E.J.4    Martin, S.A.5    Haff, L.A.6
  • 78
    • 84990652333 scopus 로고
    • Metastable decay of peptides and proteins in matrix-assisted laser-desorption mass spectrometry
    • Spengler, B.; Kirsch, D.; Kaufmann, R. "Metastable decay of peptides and proteins in matrix-assisted laser-desorption mass spectrometry," Rapid Commun. Mass Spectrom. 1991, 5, 198-202.
    • (1991) Rapid Commun. Mass Spectrom. , vol.5 , pp. 198-202
    • Spengler, B.1    Kirsch, D.2    Kaufmann, R.3
  • 80
    • 0029361211 scopus 로고
    • Analysis of modified oligonucleotides by matrix-assisted laser desorption/ionization Fourier transform mass spectrometry
    • Stemmler, E. A.; Buchanan, M. V.; Hurst, G. B.; Hettich, R. L. "Analysis of modified oligonucleotides by matrix-assisted laser desorption/ionization Fourier transform mass spectrometry," Anal. Chem. 1995, 67, 2924-2930.
    • (1995) Anal. Chem. , vol.67 , pp. 2924-2930
    • Stemmler, E.A.1    Buchanan, M.V.2    Hurst, G.B.3    Hettich, R.L.4
  • 81
    • 0027668749 scopus 로고
    • Matrix-assisted laser desorption/ionization Fourier-transform mass spectrometry of oligodeoxyribonucleotides
    • Stemmler, E. A.; Hettich, R. L.; Hurst, G. B.; Buchanan, M. V. "Matrix-assisted laser desorption/ionization Fourier-transform mass spectrometry of oligodeoxyribonucleotides," Rapid Commun. Mass Spectrom. 1993, 7, 828-836.
    • (1993) Rapid Commun. Mass Spectrom. , vol.7 , pp. 828-836
    • Stemmler, E.A.1    Hettich, R.L.2    Hurst, G.B.3    Buchanan, M.V.4
  • 82
    • 0028675696 scopus 로고
    • Positiveion fast-atom bombardment tandem mass spectrometry of peptide nucleic acids
    • Takao, T.; Fukuda, H.; Coult, J.; Shimonishi, Y. "Positiveion fast-atom bombardment tandem mass spectrometry of peptide nucleic acids," Rapid Commun. Mass Spectrom. 1994, 8, 925-928.
    • (1994) Rapid Commun. Mass Spectrom. , vol.8 , pp. 925-928
    • Takao, T.1    Fukuda, H.2    Coult, J.3    Shimonishi, Y.4
  • 83
    • 0029687475 scopus 로고    scopus 로고
    • Aspects of the sequencing of carbohydrates and oligonucleotides by matrix-assisted laser desorption/ionization post-source decay
    • Talbo, G.; Mann, M. "Aspects of the sequencing of carbohydrates and oligonucleotides by matrix-assisted laser desorption/ionization post-source decay," Rapid Commun. Mass Spectrom. 1996, 10, 100-103.
    • (1996) Rapid Commun. Mass Spectrom. , vol.10 , pp. 100-103
    • Talbo, G.1    Mann, M.2
  • 85
    • 11944267365 scopus 로고
    • Antisense oligonucleotides
    • Uhlmann, E.; Peyman, A. "Antisense oligonucleotides," Chem. Rev. 1990, 90, 543-584.
    • (1990) Chem. Rev. , vol.90 , pp. 543-584
    • Uhlmann, E.1    Peyman, A.2
  • 86
    • 24844471118 scopus 로고
    • Structural characterization of oligonucleotides by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    • San Francisco
    • Wang, B. H.; Biemann, K. "Structural characterization of oligonucleotides by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry," Proc. 41st Conf. Mass Spectrom. Allied Topics, San Francisco, 1993, 660a-660b.
    • (1993) Proc. 41st Conf. Mass Spectrom. Allied Topics
    • Wang, B.H.1    Biemann, K.2
  • 87
    • 0013376866 scopus 로고
    • Time of flight mass spectrometry of DNA laser-ablated from frozen aqueous solutions: Applications to the human genome project
    • Williams, P. "Time of flight mass spectrometry of DNA laser-ablated from frozen aqueous solutions: Applications to the human genome project," Int. J. Mass Spectrom. Ion Proc. 1994, 131, 335-344.
    • (1994) Int. J. Mass Spectrom. Ion Proc. , vol.131 , pp. 335-344
    • Williams, P.1
  • 88
    • 0030026070 scopus 로고    scopus 로고
    • Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry
    • Wilm, M.; Shevchenko, A.; Houthaeve, T.; Breit, S.; Schweigerer, L.; Fotsis, T.; Mann, M. "Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry," Nature 1996, 379, 466-469.
    • (1996) Nature , vol.379 , pp. 466-469
    • Wilm, M.1    Shevchenko, A.2    Houthaeve, T.3    Breit, S.4    Schweigerer, L.5    Fotsis, T.6    Mann, M.7
  • 89
    • 0037709492 scopus 로고
    • Nanoelectrospray mass spectrometry/mass spectrometry for the analysis of modified oligoribonucleotides
    • Wolter, M. A.; Engels, J. W. "Nanoelectrospray mass spectrometry/mass spectrometry for the analysis of modified oligoribonucleotides," Eur. Mass Spectrom. 1995, 1, 583-590.
    • (1995) Eur. Mass Spectrom. , vol.1 , pp. 583-590
    • Wolter, M.A.1    Engels, J.W.2
  • 90
    • 0030044298 scopus 로고    scopus 로고
    • Analysis of double-stranded polymerase chain reaction products from the Bacillus cereus group by electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry
    • Wunschel, D. S.; Fox, K. F.; Fox, A.; Bruce, J. E.; Muddiman, D. C.; Smith, R. D. "Analysis of double-stranded polymerase chain reaction products from the Bacillus cereus group by electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry," Rapid Commun. Mass Spectrom. 1996, 10, 29-35.
    • (1996) Rapid Commun. Mass Spectrom. , vol.10 , pp. 29-35
    • Wunschel, D.S.1    Fox, K.F.2    Fox, A.3    Bruce, J.E.4    Muddiman, D.C.5    Smith, R.D.6
  • 91
    • 33748168091 scopus 로고
    • Electrospray ion source. Another variation on the free-jet theme
    • Yamashita, M.; Fenn, J. B. "Electrospray ion source. Another variation on the free-jet theme," J. Phys. Chem. 1984a, 88, 4451-4459.
    • (1984) J. Phys. Chem. , vol.88 , pp. 4451-4459
    • Yamashita, M.1    Fenn, J.B.2
  • 92
    • 33845471401 scopus 로고
    • Negative ion production with the electrospray ion source
    • Yamashita, M.; Fenn, J. B. "Negative ion production with the electrospray ion source," J. Phys. Chem. 1984b, 88, 4671-4675.
    • (1984) J. Phys. Chem. , vol.88 , pp. 4671-4675
    • Yamashita, M.1    Fenn, J.B.2
  • 93
    • 0029638418 scopus 로고
    • Oligodeoxynucleotide fragmentation in MALDI/OF mass spectrometry using 355-nm radiation
    • Zhu, L.; Parr, G. R.; Fitzgerald, M. C.; Nelson, C. M.; Smith, L. M. "Oligodeoxynucleotide fragmentation in MALDI/OF mass spectrometry using 355-nm radiation," J. Am. Chem. Soc. 1995, 117, 6048-6056.
    • (1995) J. Am. Chem. Soc. , vol.117 , pp. 6048-6056
    • Zhu, L.1    Parr, G.R.2    Fitzgerald, M.C.3    Nelson, C.M.4    Smith, L.M.5
  • 94
    • 0018146165 scopus 로고
    • 3′-Terminal nucleotide sequence of encephalomyocarditis virus RNA determined by reverse transcriptase and chain-terminating inhibitors
    • Zimmern, D.; Kaesberg, P. "3′-Terminal nucleotide sequence of encephalomyocarditis virus RNA determined by reverse transcriptase and chain-terminating inhibitors," Proc. Natl. Acad. Sci. USA 1978, 75, 4257-4261.
    • (1978) Proc. Natl. Acad. Sci. USA , vol.75 , pp. 4257-4261
    • Zimmern, D.1    Kaesberg, P.2
  • 95
    • 0014961477 scopus 로고
    • Kinetics and mechanism of the acid-catalyzed hydrolysis of some purine nucleosides
    • Zoltewicz, J. A.; Clark, D. F.; Sharpless, T. W.; Grahe, G. "Kinetics and mechanism of the acid-catalyzed hydrolysis of some purine nucleosides," J. Am. Chem. Soc. 1970, 92, 1741-1750.
    • (1970) J. Am. Chem. Soc. , vol.92 , pp. 1741-1750
    • Zoltewicz, J.A.1    Clark, D.F.2    Sharpless, T.W.3    Grahe, G.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.