cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin/oxalate oxidase-like proteins

Plant Molecular Biology

Volumn 35, Issue 4, 1997, Pages 459-469

  Membré, Nathalie ^a   Berna, Anne ^a   Neutelings, Godfrey ^b   David, Alain ^b   David, Hélène ^b   Staiger, Dorothee ^c   Vásquez, Julio Sáez ^d   Raynal, Monique ^d   Delseny, Michel ^d   Bernier, François ^a  

^a INST DE BIOL MOLEC DES PLANTES   (France)

^b UNIVERSITÉ DE PICARDIE JULES VERNE   (France)

^c ETH ZURICH   (Switzerland)

^d UNIVERSITÉ DE PERPIGNAN   (France)

Author keywords

Circadian rhythm; Embryogeny; Germin; Globulin; Oxalate oxidase; Seed

Indexed keywords

COMPLEMENTARY DNA; GERMIN; GLYCOPROTEIN; MESSENGER RNA; OXALATE OXIDASE; OXIDOREDUCTASE; PLANT DNA; PLANT RNA; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; BRASSICA; CHEMISTRY; CHROMOSOME MAP; DNA SEQUENCE; ENZYMOLOGY; GENE; GENE EXPRESSION REGULATION; GENETICS; GERMINATION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYSIOLOGY; PLANT LEAF; PLANT SEED; PROTEIN SECONDARY STRUCTURE; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; ARABIDOPSIS; BRASSICA; CHROMOSOME MAPPING; DNA, COMPLEMENTARY; DNA, PLANT; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GERMINATION; GLYCOPROTEINS; MOLECULAR SEQUENCE DATA; OXIDOREDUCTASES; PHYLOGENY; PLANT LEAVES; PLANT PROTEINS; PROTEIN STRUCTURE, SECONDARY; RNA, MESSENGER; RNA, PLANT; SEEDS; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID;

ARABIDOPSIS; ARABIDOPSIS THALIANA; BRASSICA; BRASSICA NAPUS; DICOTYLEDONEAE; GYMNOSPERMAE; HORDEUM VULGARE SUBSP. VULGARE; LILIOPSIDA; MYXOGASTRIA; TRITICUM AESTIVUM;

EID: 9844242896     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1005833028582     Document Type: Article

References (43)

1. Bäumlein H, Braun H, Kakhovskaya IA, Shutov AD: Seed storage proteins of Spermatophytes share a common ancestor with dessication proteins of Fungi. J Mol Evol 41: 1070-1075 (1995).
2. Belknap WR, Garbarino JE: The role of ubiquitin in plant senescence and stress response. Trends Plant Sci 1: 331-335 (1996).
3. Bernier F, Lemieux G, Pallotta D: Gene families encode the major encystment-specific proteins of Physarum polycephalum plasmodia. Gene 59: 265-277 (1987).
4. Braun H, Czihal A, Shutov AD, Bäumlein H: A vicilin-like seed protein of cycads: similarity to sucrose binding proteins. Plant Mol Biol 31: 35-44 (1996).
5. Brisson L, Tenhaken R, Lamb C: Function of oxidative cross-linking of cell wall structural proteins in plant disease resistance. Plant Cell 6: 1703-1712 (1994).
6. Callard D, Axelos M, Mazzolini L: Novel molecular markers for late phases of the growth cycle of Arabidopsis thaliana cell-suspension cultures are expressed during organ senescence. Plant Physiol 112: 705-715 (1996).
7. Carpita NC, Gibeaut DM: Structural models of primary cell walls in flowering plants: consistency of molecular structure with the physical properties of the walls during growth. Plant J 3: 1-30 (1993).
8. Cooke F et al: Further progress towards a catalogue of all Arabidopsis genes: analysis of a set of 5000 non-redundant ESTs. Plant J 9: 101-124 (1996).
9. Creusot F et al: The CIC library: a large insert YAC library for genome mapping in Arabidopsis thaliana. Plant J 8: 763-770 (1995).
10. David H, Domon JM, Neutelings G, David A: Identification of an early marker of embryogenesis in pine. In: Ahuja MR, Boerjan W, Neale DB (eds) Somatic Cell Genetics and Molecular Genetic of Trees, pp. 29-39. Kluwer Academic Publishers, Dordrecht (1996).
11. Domon J-M, Dumas B, Lainé E, Meyer Y, David A, David H: Three glycosylated polypeptides secreted by several embryogenic cell cultures of pine show highly specific serological affinity to antibodies directed against the wheat germin apoprotein monomer. Plant Physiol 108: 141-148 (1995).
12. Doyle JJ, Doyle JL: Isolation of plant DNA from fresh tissue. Focus 12: 13-15 (1990).
13. Dumas B, Freyssinet G, Pallett K: Tissue-specific expression of germin-like OxO during development and fungal infection of barley seedlings. Plant Physiol 107: 1091-1096 (1995).
14. Dumas B, Sailland A, Cheviet J-P, Freyssinet G, Pallett K: C R Acad Sci Paris 316: 793-798 (1993).
15. Heintzen C, Fischer R, Melzer S, Kappeler S, Apel K, Staiger D: Circadian oscillations of a transcript encoding a germin-like protein that is associated with cell walls in young leaves of the long-day plant Sinapis alba L. Plant Physiol 106: 905-915 (1994).
16. Höfte H et al: An inventory of 1152 expressed sequence tags obtained by partial sequencing of cDNAs from Arabidopsis thaliana. Plant J 4: 1051-1061 (1993).
17. Hurkman WJ, Lane GB, Tanaka CK: Nucleotide sequence of a transcript encoding a germin-like protein that is present in salt-stressed barley (Hordeum vulgare L.) roots. Plant Physiol 104: 803-804 (1994).
18. Hurkman WJ, Tanaka CK: Effect of salt stress on germin gene expression in barley roots. Plant Physiol 110: 971-977 (1996).
19. Hurkman WJ, Tanaka CK: Germin gene expression is induced in wheat leaves by powdery mildew infection. Plant Physiol 111: 735-739 (1996).
20. Hurkman WJ, Tao HP, Tanaka CK: Germin-like polypeptides increase in barley roots during salt stress. Plant Physiol 97: 366-374 (1991).
21. Jarvis P, Lister C, Szabo V, Dean C: Integration of CAPS markers into the RFLP map generated using recombinant inbred lines of Arabidopsis thaliana. Plant Mol Biol 24: 685-687 (1994).
22. Kay R, Chan A, Daly M, McPherson J: Duplication of CaMV promoter sequences creates a strong enhancer for plant genes. Science 236: 1299-1302 (1987).
23. Ko T-P, Ng JD, McPherson A: The three-dimensional structure of canavalin from Jack bean (Canavalia ensiformis) Plant Physiol 101: 729-744 (1993).
24. Lane BG: Cellular dessication and hydration: developmentally regulated proteins, and the maturation and germination of seed embryos. FASEB J 5: 2893-2901 (1991).
25. Lane BG: Oxalate, germin, and the extracellular matrix of higher plants. FASEB J 8: 294-301 (1994).
26. Lane BG, Bernier F, Dratewka-Kos E, Shafai R, Kennedy TD, Pyne C, Munro JR, Vaughan T, Walters D, Altomare F: Homologies between members of the germin gene family in hexaploid wheat and similarities between these wheat germins and certain Physarum spherulins. J Biol Chem 266: 10461-10469 (1991).
27. Lane BG, Cuming AC, Frégeau J, Carpita NC, Hurkman WH, Bernier F, Dratewka-Kos E, Kennedy TD: Germin isoforms are discrete temporal markers of wheat development: pseudogermin is a unique thermostable water-soluble oligomeric protein in ungerminated embryos and like germin in germinated embryos it is incorporated into cell wall. Eur J Biochem 209: 961-969 (1992).
28. Lane BG, Dunwell JM, Ray JA, Schmitt MR, Cuming AC: Germin, a protein marker of early plant development, is an oxalate oxidase. J Biol Chem 268: 12239-12242 (1993).
29. Lane BG, Grzelczak Z, Kennedy T, Kajioka R, Orr J, D'A-gostino S, Jaikaran A: Germin: compartmentation of the two forms of the protein by washing growing wheat embryos. Biochem Cell Biol 64: 1025-1037 (1986).
30. Lawrence MC, Izard T, Beuchat M, Blagrove RJ, Colman PM: Structure of phaseolin at 2.2 Å resolution; implications for a common vicilin/legumin structure and the genetic engineering of seed storage proteins. J Mol Biol 238: 748-776 (1994).
31. McCubbin WC, Kay CM, Kennedy TD, Lane BG: Germin: physiochemical properties of the glycoprotein which signals onset of growth in the germinating wheat embryo. Biochem Cell Biol 65: 1039-1048 (1987).
32. Mehdy MC: Active oxygen species in plant defense against pathogens. Plant Physiol 105: 467-472 (1994).
33. Michalowski CB, Bohnert HJ: Nucleotide sequence of a root-specific transcript encoding a germin-like protein from the halophyte Mesembryanthemum crystallinum. Plant Physiol 100: 537-538 (1992).
34. Olson PD, Varner JE: Hydrogen peroxide and lignification. Plant J 4: 887-892 (1993).
35. Ono M, Sage-Ono K, Inoue M, Kamada H, Harada H: Transient increase in the level of mRNA for a germin-like protein in leaves of the short-day plant Pharbitis nil during the photoinduction of flowering. Plant Cell Physiol 37: 855-861 (1996).
36. Rost B, Sander C: Combining evolutionary information and neural networks to predict protein secondary structure. Proteins 19: 55-72 (1994).
37. Sáez-Vásquez J, Raynal M, Meza-Basso L, Delseny M: Two related, low temperature-induced genes from Brassica napus are homologous to the human tumour bbc1 (breast basic conserved) gene. Plant Mol Biol 23: 1211-1221 (1993).
38. Sambrook J, Fritsch, Maniatis T: Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1989).
39. Showalter AM: Structure and function of plant cell wall proteins. Plant Cell 5: 9-23 (1993).
40. Shutov AD, Kakhovskaya IA, Braun H, Bäumlein H, Müntz K: Legumin-like and vicilin-like seed storage proteins: evidence for a common single-domain ancestral gene. J Mol Evol 41: 1057-1069 (1995).
41. von Heijne G: Patterns of amino acids near signal-sequence cleavage sites. Eur J Biochem 133: 17-21 (1983).
42. 2-generating glucose oxidase in transgenic potato plants. Plant Cell 7: 1357-1368 (1995).
43. 2-producing enzyme, accumulates in barley attacked by the powdery mildew fungus. Plant J 8: 139-145 (1995).