메뉴 건너뛰기




Volumn 53, Issue 5, 2004, Pages 685-692

Column sorting: Rapid calculation of the phylogenetic likelihood function

Author keywords

DNA sequence; Graph theory; Likelihood; Phylogeny; Traveling salesman problem

Indexed keywords

ALGORITHM; ARTICLE; BIOLOGICAL MODEL; CLASSIFICATION; COMPARATIVE STUDY; GENETICS; METHODOLOGY; MOLECULAR EVOLUTION; NUCLEOTIDE SEQUENCE; PHYLOGENY; STATISTICAL MODEL;

EID: 9644310428     PISSN: 10635157     EISSN: None     Source Type: Journal    
DOI: 10.1080/10635150490522269     Document Type: Article
Times cited : (25)

References (12)
  • 1
    • 0000428085 scopus 로고
    • Finding minimum spanning-trees
    • Cheriton, D., and R. E. Tarjan. 1972. Finding minimum spanning-trees. SIAM J. Comput. 19:724-742.
    • (1972) SIAM J. Comput. , vol.19 , pp. 724-742
    • Cheriton, D.1    Tarjan, R.E.2
  • 3
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. 1981. Evolutionary trees from DNA sequences: A maximum likelihood approach. J. Mol. Evol. 17:368-376.
    • (1981) J. Mol. Evol. , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 5
    • 0030034795 scopus 로고    scopus 로고
    • A Hidden Markov Model approach to variation among sites in rate of evolution
    • Felsenstein, J., and G. A. Churchill. 1996. A Hidden Markov Model approach to variation among sites in rate of evolution. Mol. Biol. Evol. 13:93-104.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 93-104
    • Felsenstein, J.1    Churchill, G.A.2
  • 6
    • 0004142841 scopus 로고
    • Cambridge University Press, Cambridge, United Kingdom
    • Gibbons, A. 1985. Algorithmic graph theory. Cambridge University Press, Cambridge, United Kingdom.
    • (1985) Algorithmic Graph Theory
    • Gibbons, A.1
  • 7
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • Hasegawa, M., H. Kishino, and T. Yano. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22:160-174.
    • (1985) J. Mol. Evol. , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 8
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • (H. M. Munro, ed.). Academic Press, New York
    • Jukes, T. H., and C. R. Cantor. 1969. Evolution of protein molecules. Pages 21-132 in Mammalian protein metabolism (H. M. Munro, ed.). Academic Press, New York.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 9
    • 0003037529 scopus 로고
    • Reducibility among combinatorial problems
    • (R. E. Miller and J. W. Thatcher, eds.). Plenum Press, New York
    • Karp, R. M. 1972. Reducibility among combinatorial problems. Pages 85-103 in Complexity of computer computations (R. E. Miller and J. W. Thatcher, eds.). Plenum Press, New York.
    • (1972) Complexity of Computer Computations , pp. 85-103
    • Karp, R.M.1
  • 10
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 11
    • 9644255407 scopus 로고    scopus 로고
    • Technical Report 98-02, Department of Mathematics and Computer Science, Duquesne University, Pittsburgh, Pennsylvania
    • Larget, B., and D. Simon. 1998. Faster likelihood calculations on trees. Technical Report 98-02, Department of Mathematics and Computer Science, Duquesne University, Pittsburgh, Pennsylvania.
    • (1998) Faster Likelihood Calculations on Trees
    • Larget, B.1    Simon, D.2
  • 12
    • 0028064845 scopus 로고
    • Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
    • Yang, Z. 1994. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J. Mol. Evol. 39:105-111.
    • (1994) J. Mol. Evol. , vol.39 , pp. 105-111
    • Yang, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.