Isolation of a lactic acid bacterium and yeast consortium from a fermented material of Ulva spp. (Chlorophyta)

Journal of Applied Microbiology

Volumn 97, Issue 6, 2004, Pages 1297-1310

  Uchida, Motoharu ^a   Murata, M ^b  

^a FISHERIES RESEARCH AGENCY   (Japan)

^b FISHERIES RESEARCH AGENCY   (Japan)

Author keywords

Candida zeylanoides; Debaryomyces hansenii var. hansenii; Fermentation; Lactic acid bacterium; Lactobacillus brevis; Seaweed; Yeast

Indexed keywords

BACTERIA; CANDIDA; CELL CULTURE; ETHANOL; FERMENTATION; LACTIC ACID; RNA; SEAWEED; VALUE ENGINEERING;

CANDIDA ZEYLANOIDE; DEBARYOMYCE HANSENII VAR.; DEBARYOMYCES HANSENII; ETHANOL FERMENTATION; HANSENII; LACTIC ACID BACTERIA; LACTIC ACID FERMENTATION; LACTOBACILLUS BREVIS; MICROBIOTAS; ULVA SPP;

YEAST;

CELLULASE; RNA;

FERMENTATION;

ARTICLE; CANDIDA ZEYLANOIDES; CELL CULTURE; DEBARYOMYCES HANSENII; FERMENTATION; GREEN ALGA; LACTIC ACID BACTERIUM; LACTOBACILLUS BREVIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; SEAWEED; ULVA; YEAST;

ALGAE; BACTERIA (MICROORGANISMS); CANDIDA ZEYLANOIDES; CHLOROPHYTA; DEBARYOMYCES; DEBARYOMYCES HANSENI; DEBARYOMYCES HANSENII; DEBARYOMYCES HANSENII VAR. HANSENII; LACTOBACILLUS BREVIS; MICROBIOTA; ULVA;

EID: 9644287928     PISSN: 13645072     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2004.02425.x     Document Type: Article

References (28)

1. Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 25, 3389-33402.
2. Baumann, P. and Baumann, L. (1981) Genus Alteromonas. In The Prokaryotes, A Handbook on Habitats, Isolation and Identification of Bacteria ed. Dworkin, M., Schleifer, K.H. and Stackebrandt, E. pp. 1302-1330. New York: Springer-Verlag.
3. Bobin-Dubigeon, C., Lahaye, M., Guillon, F., Barry, J.-L. and Gallant, D.J. (1997) Factors limiting the biodegradation of Ulva sp. cell-wall polysaccharides. Journal of Science Food and Agriculture 75, 341-351.
4. Ezaki, T., Park, H., Sugawara, H., Suzuki, K., Yabuuchi, E., Yamada, Y., Yamamoto, H. and Yano, I. eds (1987) Bacterial Identification in Accordance with Recent Taxonomy. Tokyo: Saikon publishing.
5. Hansson, G. (1983) Methane production from marine, green macro-algae. Resources and Conservation 3, 185-194.
6. Harrigan, W.F. and McCance, M.E. eds (1966) Laboratory Methods in Microbiology. London and New York: Academic Press.
7. Kida, K. (2004) Thermal recycle of biomass by methane fermentation. In Characteristics of Biomass Energy and the Techniques for its Energy Conversion and Utilization, pp. 339-379. Tokyo: NTS.
8. Kimura, M. (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Biology and Evolution 4, 406-425.
9. Maeda, T., Yoshinaga, I., Murakami, M., Shiba, T. and Ishida, Y. (1999) Growth and phylogenetic characteristics of a pelagic marine bacterium, Alteromonas sp. KE 10, adapted to low-nutrient environments. Microbes and Environment 14, 209-217.
10. McClay, D.O., Nulty, W.L. and Miller, G.R. (1959) Effect of potassium versus sodium in the sporulation of Saccharomyces. Journal of Bacteriology 78, 362-368.
11. Michel, C., Lahaye M., Bonnet C., Mabeau S. and Bary J.L. (1996) In vitro fermentation by human faecal bacteria of total and purified dietary fibers from brown seaweeds. The British Journal of Nutrition 75, 263-280.
12. Miyao, S. (1995) Lactic acid bacteria in pickled vegetable. In Food Microbiology Handbook ed. Yoshii, H. pp. 333-350. Tokyo: Gihodo.
13. Porter, K.G. and Feig, Y.S. (1980) The use of DAPI for identifying and counting aquatic microflora. Limnology and Oceanography 5, 943-948.
14. Saitou, N. and Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenic trees. Molecular Biology and Evolution 4, 406-425.
15. Sawabe, T., Setoguchi, N., Inoue, S., Tanaka, R., Ootsubo, M., Yoshimizu, M. and Ezura, Y. (2003) Acetic production of Vibrio halioticoli from alginate: a possible role for establishment of abalone-V. halioticoli association. Aquaculture, 219, 671-679.
16. Shimidu, U. (1985) Classification and identification of marine bacteria. In Methods on Marine Microbiology ed. Kadota, H. and Taga, N. pp. 228-233. Tokyo: Gakkaishuppan Center.
17. Sivalingam, P.M. (1982) Biofuel-gas production from marine algae. Japanese Journal of Phycology 30, 207-212.
18. Steinkraus, K.H. (1993) Comparison of fermented food of the East and West. In Fish Fermentation Technology ed. Lee, C.H., Steinkraus K.H. and Reilly, P.J.A. pp. 1-13. Tokyo: United Nations University Press.
19. Suzuki, M., Suh, S., Sugita, T. and Nakase, T. (1999) A phylogenetic study on galactose-containing Candida species based on 18S ribosomal DNA sequences. Journal of General Applied Microbiology 45, 229-238.
20. Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) ClustalW. Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4673-4680.
21. Uchida, M. and Murata, M. (2002) Fermentative preparation of single cell detritus from seaweed, Undaria pinnatifida, suitable as a replacement hatchery diet for unicellular algae. Aquaculture 207, 345-357.
22. Uchida, M., Nakata K. and Maeda M. (1997a) Introduction of detrital food webs into an aquaculture system by supplying single cell algal detritus produced from Laminaria japonica as a hatchery diet for Artemia nauplii. Aquaculture 154, 125-137.
23. Uchida, M., Nakata K. and Maeda M. (1997b) Conversion of Ulva fronds to a hatchery diet for Artemia nauplii utilizing the degrading and attaching abilities of Pseudoalteromonas espejiana. Journal of Applied Phycology 9, 541-549.
24. Uchida, M., Amakasu, H., Satoh, Y. and Murata, M. (2004) Combination of lactic acid bacteria and yeast suitable for preparation of marine silage. Fisheries Science 70, 508-518.
25. Weisburg, W.G., Barns, S.M., Pelletier, D.A. and Lane, D.J. (1991) 16S ribosomal DNA amplification for phylogenic study. Journal of Bacteriology 173, 697-703.
26. Wickerham, L.J. (1951) Taxonomy of yeasts. In Technical Bulletin 1029, 56 pp. +plates 1-5. Washington, DC: US Department of Agriculture.
27. Wise, D.L., Augenstein, D.C. and Ryther, J. H. (1979) Methane fermentation of aquatic biomass. Resource Recovery and Conservation 4, 217-237.
28. Yarrow, D. (1998) Methods for isolation, maintenance and identification of yeasts. In The Yeast, A Taxonomic Study ed. Kurtzman, C.P. and Fell J.W. pp. 77-100. Amsterdam: Elsevier.