Differential control of transcription by homologous homeodomain coregulators

Molecular and Cellular Biology

Volumn 16, Issue 6, 1996, Pages 2967-2976

  Chris Huang, C ^a,b   Herr, Winship ^a  

^a Howard Hughes Medical Institute Cold Spring Harbor Laboratory Cold Spring Harbor   (United States)

^b STONY BROOK UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA BINDING PROTEIN; HOMEODOMAIN PROTEIN;

ARTICLE; BINDING SITE; DNA BINDING; DNA SEQUENCE; HERPES SIMPLEX VIRUS 1; NONHUMAN; PRIORITY JOURNAL; TRANSCRIPTION INITIATION; TRANSCRIPTION REGULATION;

BOVINAE; BOVINE HERPESVIRUS 1; HERPES; HERPESVIRIDAE; HERPESVIRUS 1; HUMAN HERPESVIRUS 1;

EID: 9344250068     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/mcb.16.6.2967     Document Type: Article

References (42)

1. apRhys, C. M. J., D. M. Ciufo, E. A. O'Neill, T. J. Kelly, and G. S. Hayward. 1989. Overlapping octamer and TAATGARAT motifs in the VF65-response elements in herpes simplex virus immediate-early promoters represent independent binding sites for cellular nuclear faclor III. J. Virol. 63:2798-2812.
2. Aurora, R., and W. Herr. 1992. Segments of the POU domain influence one another's DNA-binding specificity. Mol. Cell. Biol. 12:455-467.
3. Carpenter, D. E., and V. Misra. 1992. Sequences of the bovine herpesvirus 1 homologue of herpes simplex virus type-1 α-trans-inducing factor (UL48). Gene 119:295-263.
4. Cleary, M. A. 1995. The Oct-1 POU domain: versatility in transcriptional regulation by a flexible DNA-binding domain. Ph.D. thesis. State University of New York - Stony Brook, Stony Brook.
5. Cleary, M. A., and W. Herr. 1995. Mechanisms for flexibility in DNA sequence recognition and VP16-induced complex formation by the Oct-1 POU domain. Mol. Cell. Biol. 15:2090-2100.
6. Cleary, M. A., S. Stern, M. Kanaka, and W. Herr. 1993. Differential positive control by Oct-1 and Oct-2: activation of a transcriptionally silent motif through Oct-1 and VP16 corecruitment. Genes Dev. 7:72-83.
7. Das, G., C. S. Hinkley, and W. Herr. 1995. Basal promoter elements as a selective determinant of transcriptional activator function. Nature (London) 374:657-660.
8. Elliott, G. D. 1994. The extreme carboxyl terminus of the equine herpesvirus 1 homolog of herpes simplex virus VP16 is essential for immediate-early gene activation. J. Virol. 68:4890-4897.
9. Gerster, T., and R. G. Roeder. 1988. A herpesvirus trans-activating protein interacts with transcription factor OTF-1 and other cellular proteins. Proc. Natl. Acad. Sci. USA 85:6347-6351.
10. Goutte, C., and A. D. Johnson. 1988. a1 protein alters the DNA binding specificity of α2 repressor. Cell 52:875-882.
11. Herr, W. 1992. Oct-1 and Oct-2: differential transcriptional regulation by proteins that bind to the same DNA sequence, p. 1103-1135. In S. McKnight and K. Yamamoto (ed.), Transcriptional regulation. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
12. Herr, W., and M. A. Cleary. 1995. The POU domain: versatility in transcriptional regulation by a flexible two-in-one DNA-binding domain. Genes Dev. 9:1679-1693.
13. Johnson, A. 1992. A combinatorial regulatory circuit in budding yeast, p. 975-1006. In S. McKnight and K. Yamamoto (ed.), Transcriptional regulation. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
14. Keleher, C. A., C. Goutte, and A. Johnson. 1988. The yeast cell-type-specific repressor α2 acts co-operatively with a non-cell-type-specific protein. Cell 53:927-936.
15. Keleher, C. A., S. Passmore, and A. Johnson. 1989. Yeast repressor α2 binds to its operator cooperatively with yeast protein MCM1. Mol. Cell. Biol. 9:5228-5230.
16. Kristie, T. M., J. H. LeBowitz, and P. A. Sharp. 1989. The octamer-binding proteins form multi-protein-DNA complexes with the HSV αTIF regulatory protein. EMBO J. 8:4229-4238.
17. Kristie, T. M., and P. A. Sharp. 1990. Interactions of the Oct-1 POU sub-domains with specific DNA sequences and with the HSV α-trans-activator protein. Genes Dev. 4:2383-2396.
18. Kunkel, T. A., J. D. Roberts, and R. A. Zakour. 1987. Rapid and efficient site-specific mutagenesis without phenotypic selection. Methods Enzymol. 154:367-382.
19. Lai, J.-S., M. A. Cleary, and W. Herr. 1992. A single amino acid exchange transfers VP16-induced positive control from the Oct-1 to the Oct-2 homeo domain. Genes Dev. 6:2058-2065.
20. Lai, J.-S., and W. Herr. 1992. Ethidium bromide provides a simple tool for identifying genuine DNA-independent protein associations. Proc. Natl. Acad. Sci. USA 89:6958-6962.
21. Mackem, S., and B. Roizman. 1982. Differentiation between promoter and regulator regions of herpes simplex virus 1: the functional domains and sequences of a movable a regulator. Proc. Natl. Acad. Sci. USA 79:4917-4921.
22. Misra, V., A. C. Bratanich, D. Carpenter, and P. O'Hare. 1994. Protein and DNA elements involved in transactivation of the promoter of the bovine herpesvirus (BHV) 1 IE-1 transcription unit by the BHV α gene trans-inducing factor. J. Virol. 68:4898-4909.
23. Moriuchi, H., M. Moriuchi, and J. I. Cohen. 1995. Protein and cis-acting elements associated with transactivation of the varicella-zoster virus (VZV) immediate-early gene 62 promoter by VZV open reading frame 10 protein. J. Virol. 69:4693-4701.
24. Moriuchi, H., M. Moriuchi, S. E. Straus, and J. I. Cohen. 1993. Varicella-zoster virus open reading frame 10 protein, the herpes simplex virus VP16 homolog, transactivates herpesvirus immediate-early gene promoters. J. Virol. 67:2739-2746.
25. O'Hare, P. 1993. The virion transactivator of herpes simplex virus. Semin. Virol. 4:145-155.
26. O'Hare, P., C. R. Goding, and A. Haigh. 1988. Direct combinatorial interaction between a herpes simplex virus regulatory protein and a cellular octamer-binding factor mediates specific induction of virus immediate-early gene expression. EMBO J. 7:4231-4238.
27. Pomerantz, J. L., T. M. Kristie, and P. A. Sharp. 1992. Recognition of the surface of a homeo domain protein. Genes Dev. 6:2047-2057.
28. Pomerantz, J. L., C. O. Pabo, and P. A. Sharp. 1995. Analysis of homeodomain function by structure-based design of a transcription factor. Proc. Natl. Acad. Sci. USA 92:9752-9756.
29. Purewal, A. S., R. Allsopp, M. Riggio, E. A. R. Telford, S. Azam, A. J. Davison, and N. Edington. 1994. Equid herpesvirus 1 and 4 encode functional homologs of the herpes simplex virus type 1 virion transactivator protein, VP16. Virology 198:385-389.
30. Stark, M. R., and A. D. Johnson. 1994. Interaction between two homeodomain proteins is specified by a short C-terminal tail. Nature (London) 371: 429-432.
31. Staudt, L. M., H. Singh, R. Sen, T. Wirth, P. A. Sharp, and D. Baltimore. 1986. A lymphoid-specific protein binding to the octamer motif of immunoglobulin genes. Nature (London) 323:640-643.
32. Stern, S., and W. Herr. 1991. The herpes simplex virus trans-activator VP16 recognizes the Oct-1 homeo domain: evidence for a homeo domain recognition subdomain. Genes Dev. 5:2555-2566.
33. Stern, S., M. Tanaka, and W. Herr. 1989. The Oct-1 homeodomain directs formation of a multiprotein-DNA complex with the HSV transactivator VP16. Nature (London) 341:624-630.
34. Tanaka, M., U. Grossniklaus, W. Herr, and N. Hernandez. 1988. Activation of the U2 snRNA promoter by the octamer motif defines a class of RNA polymerase II enhancer element. Genes Dev. 2:1764-1778.
35. Tanaka, M., and W. Herr. 1990. Differential transcriptional activation by Oct-1 and Oct-2: interdependent activation domains induce Oct-2 phosphorylation. Cell 60:375-386.
36. Tanaka, M., J.-S. Lai, and W. Herr. 1992. Promoter-selective activation domains in Oct-1 and Oct-2 direct differential activation of an snRNA and mRNA promoter. Cell 68:755-767.
37. Thompson, C. C., and S. L. McKnight. 1992. Anatomy of an enhancer. Trends Genet. 8:232-236.
38. Triezenberg, S. J., R. C. Kingsbury, and S. L. McKnight. 1988. Functional dissection of VP16, the trans-activator of herpes simplex virus immediate early gene expression. Genes Dev. 2:718-729.
39. Vershon, A. K., and A. D. Johnson. 1993. A short, disordered protein region mediates interactions between the homeodomain of the yeast α2 protein and the MCM1 protein. Cell 72:105-112.
40. Walker, S., S. Hayes, and P. O'Hare. 1994. Site-specific conformational alteration of the Oct-1 POU domain-DNA complex as the basis for differential recognition by Vmw65 (VP16). Cell 79:841-852.
41. Wilson, A. C., K. LaMarco, M. G. Peterson, and W. Herr. 1993. The VP16 accessory protein HCF is a family of polypeptides processed from a large precursor peotein. Cell 74:115-125.
42. Zoller, M. J., and M. Smith. 1983. Oligonucleotide-directed mutagenesis of DNA fragment cloned into M13 vectors. Methods Enzymol. 100:468-500.