Identification of a class of Saccharomyces cerevisiae mutants defective in fatty acid repression of gene transcription and analysis of the frm2 gene

Yeast

Volumn 12, Issue 4, 1996, Pages 319-331

  Mchale, Michael W ^a   Kroening, K Dubear ^a   Bernlohr, David A ^a  

^a UNIVERSITY OF MINNESOTA   (United States)

Author keywords

Lipids; OLE1; Oleic acid

Indexed keywords

FATTY ACID; OLEIC ACID;

ARTICLE; CONTROLLED STUDY; DEFECTIVE MUTANT; GENE REPRESSION; GENETIC TRANSCRIPTION; LIPID METABOLISM; NONHUMAN; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE;

EID: 9244240322     PISSN: 0749503X     EISSN: None     Source Type: Journal    
DOI: 10.1002/(sici)1097-0061(19960330)12:4<319::aid-yea914>3.0.co;2-%23     Document Type: Article

References (41)

1. Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A. and Struhl, K. (1987). Current Protocols in Molecular Biology. John Wiley and Sons, New York.
2. Bennetzen, J. L. and Hall, B. D. (1982). Codon selection in yeast. J. Biol. Chem. 257 (6), 3026-3031.
3. Boeke, J. D., Trueheart, J, Natsolulis, G. and Fink, G. R. (1987). 5-fiuoroorotic acid as a selective agent in yeast molecular genetics. Meth. Enz. 154, 164-175.
4. Bossie, M. A. and Martin, C. E. (1989). Nutritional regulation of yeast delta-9 fatty acid desaturase activity. J. Bact. 171 (12), 6409-6413.
5. Bradford, M. M. (1976). A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72, 248-254.
6. Brosius, J. (1989). Superpolylinkers in cloning and expression vectors. DNA 8 (10), 759-777.
7. Chen, C., Kacherovsky, N., Dombek, K. M., Camier, S., Thukral, S. K., Rhim, E. and Young, E. T. (1994). Identification of potential target sequences for Adr1p through characterization of essential nucleotides in UAS1. Mol. Cell. Bio. 14 (6), 3842-3852.
8. Cigan, A. M. and Donahue, T. F. (1987). Sequence and structural features associated with translational initiator regions in yeast - a review. Gene 59, 1-18.
9. Einerhand, A. W., Kos, W. T., Distel, D. and Tabak, H. F. (1993). Characterization of a transcriptional control element involved in proliferation of peroxisomes in yeast in response to oleate. Eur. J. Biochem. 214 (1), 323-331.
10. Einerhand, A. W. C., Van der Leij, I., Kos, W. T., Distel, B. and Tabak, H. F. (1992). Transcriptional regulation of genes encoding proteins involved in biogenesis of peroxisomes in Saccharomyces cerevisiae. Cell Biochem. and Function 10, 185-191.
11. Einerhand, A. W. C., Voorn-Brouwer, T. M., Erdmann, R., Kunau, W. and Tabak, H. F. (1991). Regulation of transcription of the gene coding for peroxisomal 3-oxoacyl-CoA thiolase of Saccharomyces cerevisiae. Eur. J. Biochem 200, 113-122.
12. Feinberg, A. P. and Vogelstein, B. (1983). A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132, 6-13.
13. Filipits, M., Simon, M. M., Rapatz, W., Hamilton, B. and Ruis, H. (1993). A Saccharomyces cerevisiae upstream activating sequence mediates induction of peroxisome proliferation by fatty acids. Gene 132, 49-55.
14. Gancedo, J. M. (1992). Carbon catabolite repression in yeast. Eur. J. Biochem. 206, 297-313.
15. Gietz, R. D. and Sugino. A. (1988). New yeast - Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites. Gene 74, 527-534.
16. Hamilton, R., Watanabe, C. K. and de Boer, H. A (1987). Compilation and comparison of the sequence context around the AUG start codon in Saccharomyces cerevisiae mRNAs. Nucl. Acids Res. 15, 3581-3593.
17. Ito, H., Fukuda, Y., Murata, K. and Kimura, A. (1983). Transformation of intact yeast cells treated with alkali cations. J Bact. 153 (1), 163-168.
18. Kamiryo, T., Parthasarathy, S. and Numa, S. (1976). Evidence that acyl coenzyme A synthetase activity is required for repression of yeast acetyl coenzyme A carboxylase by exogenous fatty acids. Proc. Natl. Acad. Sci. USA 73 (2), 386-390.
19. Kohlwein. S. D. and Paltauf, F. (1983). Uptake of fatty acids by the yeasts, S. warum and Saccharomyces lipolytica. Biochim Biophys. Acta 792, 310-317.
20. Kunau, W. H., et al. (1993). Two complementary approaches to study peroxisome biogenesis in Saccharomyces cerevisiae; Forward and reverse genetics. Biochemie 75, 209-224.
21. Langford, C. J., Klinz, F.-J., Donath, C. and Gallwitz, D. (1984). Point mutations identify the conserved intron-contained TACTAAC box as an essential splicing signal sequence in yeast. Cell 36, 645-653.
22. Lawrence, C. W. (1991). Classical mutagenesis techniques. Methods Enzymol. 194, 273-281.
23. McDonough, V. M., Stukey, J. E. and Martin, C. E. (1992). Specificity of unsaturated fatty acid-regulated expression of the Saccharomyces cerevisiae OLE1 gene. J. Biol. Chem. 267 (9), 5931-5936.
24. Meyers, A. M., Tzagoloff, A., Kinney, D. M. and Lusty, C. J. (1986). Yeast shuttle and integrative vectors with multiple cloning sites suitable for construction of lacZ fusions. Gene 45, 299-310.
25. Oliver, S. G., et al. (1992). The complete sequence of yeast chromosome III. Nature 357, 38-46.
26. Pearson, W. R. and Lipman, D. J. (1988). Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85, 2444-2448.
27. Rose, M. D., Novick, P., Thomas, J. H., Botstein, D. and Fink, G. R. (1987). A Saccharomyces cerevisiae genomic plasmid bank based on a centromere-containing shuttle vector. Gene 60, 237-243.
28. Rose, T. M., Schultz, E. R. and Todaro, G. J. (1992). Molecular cloning of the gene for the yeast homolog (ACB) of diazepam binding inhibitor/endozepine/ acyl-CoA-binding protein. Proc. Natl. Acad Sci. USA 89, 11287-11291.
29. Sambrook, J., Fritsch, E. F. and Maniatis, T. (1989). Molecular Cloning. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
30. Sanger, F., Nicken, S. and Coulson, A. R. (1977). DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74, 5463-5467.
31. Sarokin, L. and Carlson, M. (1985). Comparison of two yeast invertase genes: conservation of the upstream regulatory region. Nucl. Acids Res. 13 (17), 6089-6103.
32. Schuller, C., Brewster, J. C., Alexander, M. R., Gustin, M. C. and Ruis, H. (1994). The HOG pathway controls osmotic regulation of transcription via the stress response elements (STRE) of Saccharomyces cerevisiae CTT1 gene. EMBO J. 13 (18), 4382-5489.
33. Sherman, F., Fink, G. R. and Hicks, J. B. (1986). Methods in Yeast Genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
34. Sikorski, R. S. and Heiter, P. (1989). A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19-27.
35. Simon, M., Adam, G., Rapatz, W., Spevak, W. and Ruis, H. (1991). The Saccharomyces cerevisiae ADR1 gene is a positive regulator of transcription of genes encoding peroxisomal proteins. Mol. Cell. Biol. 11 (2), 699-704.
36. Sloots, J. A., Aitchison, J. D. and Rachubinski, R. A. (1991). Glucose-responsive and oleic acid-responsive elements in the gene encoding the peroxisomal trifunctional enzyme of Candida tropicalis. Gene 105, 129-134.
37. Stukey, J. E., McDonough, V. M. and Martin, C. E. (1990). The OLE1 gene of Saccharomyces cerevisiae encodes the Δ-9 fatty acid desaturase and can be functionally replaced by the rat stearoyl-CoA desaturase gene. J. Biol. Chem. 265, 20144-20149
38. Sumida, C., Graber, R. and Nunez, E. (1993). Role of fatty acids in signal transduction: modulators and messengers. Prostaglandins, Leukotrienes and Essential Fatty Acids 48, 117-122.
39. Tanaka, S. and Isono, K. (1993). Correlation between observed transcripts and sequenced ORFs of chromosome III of Saccharomyces cerevisiae. Nucl. Acids Res. 21 (5), 1149-1153.
40. Wang, T. W., Lewin, A. S. and Small, G. M. (1992). A negative regulating element controlling transcription of the gene encoding acyl-CoA oxidase of Saccharomyces cerevisiae. Nucl Acids Res. 20 (13), 3495-3500.
41. Yoshikawa, A. and Isono, K. (1990). Chromosome III of Saccharomyces cerevisiae: an ordered clone bank, a detailed restriction map and analysis of transcripts suggest the presence of 160 genes. Yeast 6, 383-401.