Identification of molecular markers for selected wood properties of Norway spruce Picea abies L. (Karst.) I. Wood density

Silvae Genetica

Volumn 53, Issue 2, 2004, Pages 45-50

  Markussen, T ^a   Tusch, A ^a   Stephan, B R ^a   Fladung, M ^a  

^a Federal Research Centre for Forestry and Forest Products   (Germany)

Author keywords

AFLP; Bulked segregant analysis; Marker assisted selection (MAS); Molecular markers; Wood properties

Indexed keywords

CLONING; DENSITOMETERS; DNA; ENZYMES; WOOD; HARDWOODS; PLANTS (BOTANY);

MOLECULAR MARKERS; X-RAY MICRODENSITOMETRY;

BIOMARKERS; POLYMERASE CHAIN REACTION;

CLONES; DENSITOMETRY; ENZYMES; NUCLEIC ACIDS; PICEA ABIES; WOOD;

ABIES; MARTES PENNANTI; PICEA; PICEA ABIES;

AFLP; BULKED SEGREGANT ANALYSIS; MARKER ASSISTED SELECTION; MARKER-ASSISTED SELECTION; MOLECULAR MARKER; NORWAY SPRUCE; PICEA ABIES (L.) KARST; SCAR MARKERS; WOOD DENSITY; WOOD PROPERTIES;

EID: 8744312904     PISSN: 00375349     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (50)

1. ARCADE, A., ANSELIN, F., FAIVRE RAMPANT, P., LESAGE, M. C., PÂQUES, L. E. and PRAT, D.: Application of AFLP, RAPD and ISSR markers to genetic mapping of European and Japanese larch. Theor. Appl. Genet. 100: 299-307 (2000).
2. BAMBER, R. K. and BURLEY, J.: The properties of radiate pine. Commonwealth Agricultural Bureau, Slough. 84 pp. (1983).
3. BRADSHAW, H. D and STETTLER, R. F.: Molecular genetics of growth and development in Populus. IV. Mapping QTLs with large effects on growth, form and phenology traits in a forest tree. Genetics 139: 963-937 (1995).
4. BYRNE, M., MURELL, J. C., OWEN, J. V., KREIDEMANN, P., WILLIAMS, E. R. and MORAN, G. F.: Identification and mode of action of quantitative trait loci affecting seedling height and leaf area in Eucalyptus nitens. Theor. Appl. Genet. 94: 674-681 (1997).
5. CLAPHAM, D., DEMEL, P., ELFSTRAND, M., KOOP, H. U., SABALA, I. and VON ARNOLD, S.: Gene transfer of Picea abies and the Production of Transgenic Plantlets. Scand. J. For. Res. 15: 151-160 (2000).
6. DE JONG, W., FORSYTH, A., LEISTER, D., GEBHARDT, C. and BAULCOMBE, D. C.: A potato hypersensitive resistance gene against potato virus X maps to a resistance gene cluster on chromosome 5. Theor. Appl. Genet. 95: 246-252 (1997).
7. DEVEY, M. E., SEWELL, M. M. and NEALE, D. B.: A comparison of loblolly and radiata pine genomes using RFLP markers. Tree Improvement for Sustainable Tropical Forestry (DIETERS, M. J. et al., eds), pp. 478-480 (1996).
8. DEVIC, M., ALBERT, S., DELSENY, M. and ROSCOE, J.: Efficient PCR walking on plant genomic DNA. Plant Physiol. Biochem. 35: 331-339 (1997).
9. DONG, N. V., SUBUDHI, P. K., LOUNG, P. N., QUANG, V. D., QUY, T. D., ZHENG, H. G., WANG, B. and NGUYEN, H. T.: Molecular mapping of a rice gene conditioning thermosensitive genic male sterility using AFLP, RFLP and SSR techniques. Theor. Appl. Genet. 100: 727-734 (2000).
10. DUTILLEUL, P., HERMAN, M. and AVELLA-SHAW, T.: Growth rate effects on correlation among ring width, wood density, and mean tracheid length in Norway spruce (Picea abies). Can. J. For. Res. 28: 56-68 (1998).
11. DUMOLIN, S., DEMESURE, B. and PETIT, R. J.: Inheritance of chloroplast and mitochondrial genomes in pedunculate oak investigated with an efficient PCR method. Theor. Appl. Genet. 91: 1253-1256 (1995).
12. GRATTAPAGLIA, D., BERTOLUCI, F. L. G., PENCHEL, R. and SEDEROFF, R. R.: Genetic mapping of quantitative trait loci controlling growth and wood quality traits in Eucalyptus grandis using a maternal half-sib family and RAPD markers. Genetics 144: 1205-1214 (1996).
13. GROOVER, A., DEVEY, M., FIDDLER, T., LEE, J., MEGRAW, R., MITCHEL-OLDS, T., SHERMAN, B., VUJCIC, S., WILLIAM, C. and NEALE, D.: Identification of quantitative trait loci influencing wood specific gravity in an outbred pedigree of Loblolly Pine. Genetics 138: 1293-1300 (1994).
14. HARKINS, D. M., JOHNSON, G. N., SKAGGS, P. A., MIX, A. D., DUPPER, G. E., DEVEY, M. E., KINLOCK, B. B. and NEALE, D. B.: Saturation mapping of a major gene for resistance to white pine blister rust in sugar pine. Theor. Appl. Genet. 97: 1355-1360 (1998).
15. HAYES, A. J. and SAGHAI MAROOF, M. A.: Targeted resistance gene mapping in soybean using modified AFLPs. Theor Appl Genet 100: 1279-1283 (2000).
16. KENNEDY, R. W.: Coniferous wood quality in the future: concerns and strategies. Wood Science and Technology 29: 321-338 (1995).
17. KINLAW, C. S. and NEALE, D. B.: Complex gene families in pine genomes. Trends in Plant Science 9: 356-359 (1997).
18. KNOX, M. R. and ELLIS, T. H. N.: Stability and inheritance of methylation states at PstI sites in Pisum. Mol. Genet. Genomics. 265: 497-507 (2001).
19. KUMAR, S., SPELMAN, R. J., GARRICK, D. J., RICHARDSON, T. E., LAUSBERG, M. and WILCOX, P. L.: Multiple-marker mapping of wood density loci in an outbreed pedigree of radiata pine. Theor. Appl. Genet. 100: 926-933 (2000).
20. LANCER, E. S. and BOTSTEIN, D.: Mapping mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121: 185-199 (1989).
21. LERCETEAU, E., PLOMION, C. and ANDERSON, B.: AFLP mapping and detection of quantitative trait loci (QTLs) for economically important traits in Pinus sylvestris: a preliminary study. Molecular Breeding 6: 451-458 (2000).
22. LIU, Y. G., MITSUKAWA, N., OOSUMI, T. and WHITTIER, R. F.: Efficient isolation and mapping of Arabidopsis thaliana T-DNA junctions by thermal asymmetric interlaced PCR. The Plant Journal 8: 457-463 (1995).
23. LÓPEZ, M., HUMARA, J. M., RODRIGUEZ, R. and ORDAS, R.: Transient uidA gene expression in electroporated cotyledonary prototplast of Pinus nigra ssp. salzmannii and in bombarded cotyledons. Can. J. For. Res. 30: 448-455 (2000).
24. MCKAY, J. J., LIU, W., WHETTEN, R., SEDEROFF, R. R. and O'MALLEY, D.: Genetic analysis of cinnamyl alcohol dehydrogenase in loblolly pine: single gene inheritance, molecular characterization and evolution. Mol. Gen. Genet. 247: 537-545 (1995).
25. MEKSEM, K., RUBEN, E., HYTEN, D., TRIWITAYAKORN, K. and LIGHTFOOT, D. A.: Conversion of AFLP bands into high-throughput DNA markers. Mol. Genet. Genomics. 265: 207-214 (2001).
26. MICHELMORE, R. W., PARAN, I. and KESSELI, R. V.: Identification of markers linked to disease resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proc. Natl. Acad. Sci. USA 88: 9828-9832 (1991).
27. NEGI, M. S., DEVIC, M., DELSENY, M. and LAKSHMIKUMARAN, M.: Identification of AFLP fragments linked to seed coat colour in Brassica junicea and conversion to a SCAR marker for rapid selection. Theor. Appl. Genet. 101: 146-152 (2000).
28. OBERHAGEMANN, P., CHATOT-BALANDRAS, C., SCHÄFER-PREGL, R., WEGENER, D., PALOMINO, C., SALAMINI, F., BONNEL, E. and GEBHARDT, C.: A genetic analysis of quantitative resistance to blight in potato: towards marker-assisted selection. Molecular Breeding 5: 399-415 (1999).
29. PLOMION, C., BAHRMAN, N., DUREL, C. E. and O'MALLEY, D. M.: Genomic mapping in Pinus pinaster (maritime pine) using RAPD and protein markers. Heredity 74: 661-668 (1995).
30. PLOMION, C., DUREL, C. E. and O'MALLEY, D. M.: Genetic dissection of height in maritime pine seedlings raised under accelerated growth conditions. Theor. Appl. Genet. 93: 849-858 (1996).
31. PLOMION, C., HURME, P., FRIGERIO, J. M., RIDOLFI, M., POT, D., PIONNEAU, C., AVILA, C., GALLARDO, F., DAVID, H., NEUTELINGS, G., CAMPBELL, M., CANOVAS, F. M., SAVOLAINEN, O., BODÉNÈS, C. and KREMER, A.: Developing SSCP markers in two Pinus species. Molecular Breeding 5: 21-31 (1999).
32. FOLGE, H.: Etablissement des Courbes de Variation de la Densité du Bois par Exploration Densitométrique de Radiographies D'Echantillons Prélevé à la Tarière sur des Abres Vivants. Aplication dans les domaines technologiques et physiologiques, thèse de doctorat, Université de Nancy, France, 206p. (1966).
33. REMMINGTON, D. L., WHETTEN, R. W., LIU, B. H. and O'MALLEY, D. M.: Construction of an AFLP genetic map with nearly complete genome coverage in Pinus taeda. Theor. Appl. Genet. 98: 1279-1292 (1999)...
34. RITTER, E., ARAGONES, A., MARKUSSEN, T., ACHERÉ, V., ESPINEL, S., FLADUNG, M., WROBEL, S., FAIVRE-RAMPANT, P., JEANDROZ, S. and FAVRE, J. M.: Towards construction of an ultra high density linkage map for Pinus pinaster. Ann. For. Sci. 59: 637-643 (2002).
35. ROZENBERG, P. and FRANC, A.: Modelling wood modules of elasticity using density profiles: methods and genetic effects. Second IUFRO Workshop: Connection between silviculture and wood quality through modelling approaches and simulation software. Kruger National Park, South Africa, August 26-31 (1996).
36. ROZENBERG, P. and CAHALAN, C.: Spruce and wood quality: genetic aspects. Silvae Genetica 48: 270-79 (1997).
37. ROZENBERG, P., FRANC, A. and CAHALAN, C.: Incorporating Wood density in Breeding Programs for Softwoods in Europe: a Strategy and Asscociated methods. Silvae Genetica 50: 1-7 (2001).
38. SEDEROFF, R.: Building better trees with antisense. Nature Biotechnology 17: 750-751 (1999).
39. SEWELL, M. M., BASSONI, D. L., MEGRAV, R. A., WHEELER, N. C. and NEALE, D. B.: Identification of QTLs influencing wood property traits in loblolly pine (Pinus taeda L.). I. Physical wood properties. Theor. Appl. Genet. 101: 1273-1281 (2000).
40. SHAN, X., BLAKE, T. K. and TALBERT, L. E.: Conversion of AFLP markers to sequence-specific PCR markers in barley and wheat. Theor. Appl. Genet. 98: 1072-1078 (1999).
41. SHEPARD, M., CHAPARRO, J. X. and TEASDALE, R.: Genetic mapping of monoterpene composition in an interspecific eucalypt hybrid. Theor. Appl. Genet. 99: 1207-1215 (1999).
42. SIEBERT, P. D., CHENCHICK, A., KELLOGG, D. E., LUKYANOV, K. A. and LUKYANOV, S. A.: An improved PCR method for walking in uncloned genomic DNA. Nucleic Acids Res. 23: 1087-1088 (1995).
43. THAMARUS, K., GROOM, K., MURELL, J. and MORAN, G.: A genetic map and QTL analysis of wood and pulp traits in Eucalyptus globolus. Hybrid Breeding and Genetics of Forest Trees, Proceedings of QFRI/CRC-SNF Symposium, 9-14 April 2000, Noosa, Queensland, Australia, pp. 510-513. (Compiled by DUNGEY, H. S., DIETERS, M. J. and NIKLES, D. G.) Department od Primary Industries, Brisbane (2000).
44. VARGAS-HERNANBEZ J. and ADAMS, W. T.: Genetic relationships between wood density components and cambial growth rhythm in young coastal Douglas-fir. Can. J. For. Res. 24: 1871-1876 (1994).
45. VILLAR, M., LEFÈVRE, F., BRADSHAW, H. D. and TEISSIER DU CROS, E.: Molecular genetics of rust resistance in poplars (Melampsora larici-populina Kleb/Populus sp.) by bulked segregant analysis in a 2 x 2 factorial mating design. Genetics 143: 531-536 (1996).
46. VOS, P., HOGERS, R., BLEEKER, M., REIJANS, M., VAN DER LEE, T., HORNES, M., FRIJTERS, A., POT, J., PELEMAN, J., KUIPER, M. and ZABEAU, M.: AFLP: a new concept for DNA fingerprinting. Nucleic Acids Res. 23: 4407-4414 (1995).
47. WILLIAMS, J. G. K., KUBELIK, A. R., LIVAK, K. J., RAFALSKI, J. A. and TINGEY, S. V: DNA polymorphisms amplified by abitrary primers are useful as genetic markers. Nucl. Acids Res. 18: 6531-6535 (1991).
48. WU, R. L., REMINGTON, D. L., MACKAY, J. J., MCKEAND, S. E., O'MALLEY, D. M.: Average effect of a mutation in lignin biosynthesis in loblolly pine. Theor. Appl. Genet. 99: 705-710 (1999).
49. ZHANG, X. H. and CHIANG, V. L.: Molecular cloning of 4-coumarate: coenzyme A ligase in loblolly pine and the roles of this enzyme in the biosynthesis of lignin in compression wood. Plant Physiol. 113: 65-74 (1997).
50. ZOBEL, B. J. and VAN BUIJTENEN, J. P.: Wood variation: its causes and control. Springer-Verlag, Berlin, 363 pp. (1989).