High-resolution mapping and chromosome landing at the root-knot nematode resistance locus Ma from Myrobalan plum using a large-insert BAC DNA library

Theoretical and Applied Genetics

Volumn 109, Issue 6, 2004, Pages 1318-1327

  Claverie, M ^a   Dirlewanger, E ^a   Cosson, P ^a   Bosselut, N ^a   Lecouls, A C ^a   Voisin, R ^a   Kleinhentz, M ^a   Lafargue, B ^a   Caboche, M ^b   Chalhoub, B ^b   Esmenjaud, D ^a  

^a CEMAGREF   (France)

^b INSTITUTE OF PLANT SCIENCES PARIS SACLAY IPS2   (France)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMARKERS; CHROMOSOMES; DATA REDUCTION; THERMODYNAMIC STABILITY;

BACTERIAL ARTIFICIAL CHROMOSOMES (BAC); ROOT-KNOT NEMATODE (RKN);

GENETIC ENGINEERING;

PRIMER DNA;

ANIMAL; ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CHROMOSOME MAP; GENE LIBRARY; GENETIC POLYMORPHISM; GENETICS; NEMATODE; NUCLEOTIDE SEQUENCE; PARASITOLOGY; PATHOGENICITY; PLANT CHROMOSOME; PLANT DISEASE; PRUNUS; TERMINALIA;

ANIMALS; BASE SEQUENCE; CHROMOSOME MAPPING; CHROMOSOMES, ARTIFICIAL, BACTERIAL; CHROMOSOMES, PLANT; DNA PRIMERS; GENE LIBRARY; NEMATODA; PLANT DISEASES; POLYMORPHISM, GENETIC; PRUNUS; TERMINALIA;

BACTERIA (MICROORGANISMS); LYCOPERSICON ESCULENTUM; MELOIDOGYNE; MELOIDOGYNE JAVANICA; PRUNUS; PRUNUS CERASIFERA; PRUNUS DOMESTICA; TERMINALIA CATAPPA;

EID: 8744241779     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-004-1749-y     Document Type: Article

References (52)

1. Ammiraju S, Veremis C, Huang X, Roberts A, Kaloshian I (2003) The heat-stable root-knot nematode resistance gene Mi-9 from Lycopersicum peruvianum is on the short arm of the chromosome 6. Theor Appl Genet 106:478-484
2. Aranzana MJ, Pineda A, Cosson P, Dirlewanger E, Ascasibar J, Cipriani G, Ryder CD, Testolin R, Abbott A, King GJ, Iezzoni AF, Arús P (2002) A set of simple-sequence repeat (SSR) markers covering the Prunus genome. Theor Appl Genet 106:819-825
3. Arumuganathan K, Earle ED (1991) Estimation of nuclear DNA content of plants by flow cytometry. Plant Mol Biol Rep 9:221-223
4. Boiteux LS, Belter JG, Roberts PA, Simon PW (2000) RAPD linkage map of the genomic region encompassing the root-knot nematode (Meloidogyne javanica) resistance locus in carrot. Theor Appl Genet 100:439-446
5. Chalhoub B, Belcram H, Caboche M (2004) Efficient cloning of plant genomes into bacterial artificial chromosome (BAC) libraries with larger and more uniform insert size. Plant Biotechnol J (in press)
6. Claverie M, Bosselut N, Lecouls AC, Voisin R, Poizat C, Dirlewanger E, Kleinhentz M, Lafargue B, Laigret F, Esmenjaud D (2004) Location of independent root-knot nematode resistance genes in plum and peach. Theor Appl Genet 108:765-773
7. Cook R, Evans K (1987) Resistance and tolerance. In: Brown RH, Kerry BR (eds) Principles and practice of nematode control in crops. Academic, New York, pp 179-231
8. 4 conferring heat-stable resistance to root-knot nematodes (Meloidogyne spp.) Theor Appl Genet 103:592-600
9. Dropkin VH (1969) The necrotic reaction of tomatoes and other hosts resistant to Meloidogyne: reversal by temperature. Phytopathology 59:1632-1637
10. Esmenjaud D, Scotto La Massese C, Salesses G, Minot JC, Voisin R (1992) Method and criteria to evaluate resistance to Meloidogyne arenaria in Prunus cerasifera Ehr. Fund Appl Nematol 15:385-389
11. Esmenjaud D, Minot JC, Voisin R, Salesses G, Poupet R, Onesto JP (1993) Assessment of a method using plantlets grown from in vitro for studying resistance of Prunus cerasifera Ehr. (Myrobalan plum) to Meloidogyne spp. Nematropica 23:41-48
12. Esmenjaud D, Minot JC, Voisin R, Pinochet J, Salesses G (1994) Inter- and intraspecific resistance variability in Myrobalan plum, peach, and peach-almond rootstocks using 22 root-knot nematode populations. J Am Soc Hortic Sci 119:94-100
13. Esmenjaud D, Minot JC, Voisin R, Salesses G, Bonnet A (1995) Effect of cutting age on the resistance of Prunus cerasifera (Myrobalan plum) to Meloidogyne arenaria. J Nematol 27:634-638
14. Esmenjaud D, Minot JC, Voisin R (1996a) Effect of durable inoculum pressure and high temperature on root-galling, nematode numbers and survival of Myrobalan plum genotypes (Prunus cerasifera) highly resistant to Meloidogyne spp. Fund Appl Nematol 19:85-90
15. Esmenjaud D, Minot JC, Voisin R, Bonnet A, Salesses G (1996b) Inheritance of resistance to the root-knot nematode Meloidogyne arenaria in Myrobalan plum. Theor Appl Genet 92:873-879
16. Esmenjaud D, Minot JC, Voisin R, Pinochet J, Simard MH, Salesses G (1997) Differential response to root-knot nematodes in Prunus species and correlative genetic implications. J Nematol 29:370-380
17. Garcia GM, Stalker HT, Shroeder E, Kochert G (1996) Identification of RAPD, SCAR and RFLP markers tightly linked to nematode resistance genes introgressed from Arachis cardenasii into Arachis hypogeae. Genome 39:836-845
18. Handoo ZA, Nyczepir AP, Esmenjaud D, van der Beck JG, Castagnone-Sereno P, Carta LK, Skantar AM, Higgins JA (2004) Morphological, molecular and differential-host characterization of Meloidogyne floridensis n. sp. (Nematoda: Meloidogynidae), a root-knot nematode parasitizing peach in Florida. J Nematol 36:20-35
19. Holtzmann OV (1965) Effects of soil temperature on resistance of tomato to root-knot nematode (Meloidogyne incognita). Phytopathology 55:990-992
20. Hwang CF, Williamson VM (2003) Leucine-rich repeat-mediated intramolecular interactions in nematode recognition and cell death signaling by the tomato resistance protein Mi. Plant J 34:585-593
21. Hwang CF, Bhakta AV, Truesdell GM, Puldo WM, Williamson VM (2000) Evidence for a role of the N-terminus and leucine-rich repeat region of the Mi gene product in regulation of localised cell death. Plant Cell 12:1319-1329
22. 2 progeny. Theor Appl Genet 97:1034-1041
23. Kaloshian I, Williamson VM, Miyao G, Lawn DA, Westerdahl BB (1996) "Resistance-breaking" nematodes identified in California tomatoes. Calif Agric 50:18-19
24. Kaloshian I, Yaghoobi J, Liharska T, Hontelez J, Hanson D, Hogan P, Jesse T, Wijbrandi J, Simons G, Vos P, Zabel P, Williamson VM (1998) Genetic and physical localization of the root-knot nematode resistance locus Mi in tomato. Mol Gen Genet 257:376-385
25. Lamberti F (1979) Economic importance of Meloidogyne spp. in subtropical and Mediterranean climates. In: Lamberti F, Taylor CE (eds) Root-knot nematodes (Meloidogyne spp.): systematics, biology and control. Academic, New York, pp 342-357
26. Lecouls AC, Salesses G, Minot JC, Voisin R, Bonnet A, Esmenjaud D (1997) Spectrum of the Ma genes for resistance to Meloidogyne spp. in Myrobalan plum. Theor Appl Genet 85:1325-2334
27. Lecouls AC, Rubio-Cabetas MJ, Minot JC, Voisin R, Bonnet A, Salesses G, Dirlewanger E, Esmenjaud D (1999) RAPD and SCAR markers linked to the Ma1 root-knot nematode resistance gene in Myrobalan plum (Prunus cerasifera Ehr.). Theor Appl Genet 99:328-336
28. Lecouls AC, Bergougnoux V, Rubio-Cabetas MJ, Bosselut N, Voisin R, Poessel JL, Faurobert M, Bonnet A, Salesses G, Dirlewanger E, Esmenjaud D (2004) Marker-assisted selection for the wide-spectrum resistance to root-knot nematodes conferred by the Ma gene from Myrobalan plum (Prunus cerasifera) in interspecific Prunus material. Mol Breed 13:113-124
29. Lu ZX, Sossey-Alaoui K, Reighard GL, Baird WV, Abbott AG (1999) Development and characterization of a codominant marker linked to root-knot nematode resistance, and its application to peach rootstock breeding. Theor Appl Genet 99:115-123
30. Lu ZX, Reighard GL, Nyczepir AP, Beckman TG, Ramming DW (2000) Inheritance of resistance to root-knot nematodes in Prunus rootstocks. HortScience 35:1344-1346
31. Martinez de Llarduya O, Moore AE, Kaloshian I (2001) The tomato Rme-1 locus is required for Mi-1-mediated resistance to root-knot nematodes and the potato aphid. Plant J 27:417-425
32. Michelmore RW, Paran I, Kesseli V (1991) Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proc Natl Acad Sci USA 88:9828-9832
33. Milligan S, Bodeau J, Yaghoobi J, Kaloshian I, Zabel P, Williamson VM (1998) The root-knot nematode resistance gene Mi from tomato is a member of the leucine zipper, nucleotide binding, leucine-rich repeat family of plant genes. Plant Cell 10:1307-1319
34. Nombela G, Williamson VM, Muniz M (2003) The root-knot nematode resistance gene Mi-1.2 of tomato is responsible for resistance against the whitefly Bemisia tabaci. Mol Plant Microbe Int 16:645-649
35. Roberts PA (1992) Current status of the availability, development, and use of host plant-resistance to nematodes. J Nematol 24:213-227
36. Roberts PA (1995) Conceptual and practical aspects of variability in root-knot nematode related host plant species. Annu Rev Phytopathol 33:199-221
37. Roberts PA, Dalmasso A, Cap GB, Castagnone-Sereno P (1990) Resistance in Lycopersicum peruvianum to isolates of Mi gene-compatible Meloidogyne populations. J Nematol 22:585-589
38. Rosen S, Skaletsky HJ (1998) Primer3. Code available at http:// www.genome.wi.mit.edu/genome_software/other/primer3.html
39. Rossi M, Goggin F, Milligan SB, Kaloshian I, Ullman D, Williamson VM (1998) The nematode resistance gene Mi of tomato confers resistance against the potato aphid. Proc Natl Acad Sci USA 95:9750-9754
40. Rubio-Cabetas MJ, Lecouls AC, Salesses G, Bonnet A, Minot JC, Voisin R, Esmenjaud D (1998) Evidence of a new gene for high resistance to Meloidogyne spp. in Myrobalan plum (Prunus cerasifera). Plant Breed 117:567-571
41. Rubio-Cabetas MJ, Minot JC, Voisin R, Esmenjaud D, Salesses G, Bonnet A (1999) Response of the Ma genes from Myrobalan plum to Meloidogyne hapla and M. mayaguensis. HortScience 34:1266-1268
42. Saghai-Maroof MA, Soliman KM, Jorgensen RA, Allard RW (1984) Ribosomal DNA spacer-lengh polymorphisms in barley: Mendelian inheritance, chromosomal location and population dynamics. Proc Natl Acad Sci USA 88:8014-8018
43. Salesses G, Grasselly C, Renaud R, Claverie J (1993) Les porte-greffe des espèces fruitières à noyau du genre Prunus. In: Gallais A, Bannerot H (eds) Amélioration des espèces cultivées. INRA Editions, Paris, pp 605-619
44. Salesses G, Grasselly C, Bernhard R (1994) Utilisation des espèces indigènes et exotiques pour l'amélioration des Prunus cultivés, variétés et porte-greffe. C R Acad Agric Fr 80:77-88
45. Sasser JN (1977) Worldwide dissemination and importance of the root-knot nematodes Meloidogyne spp. J Nematol 22:585-589
46. Tameling WIL, Elzinga SDJ, Darmin PS, Vossen JH, Takken FLW, Haring MA, Comelissen JC (2002) The tomato R gene products I-2 and Mi-1 are functional ATP binding proteins with ATPase activity. Plant Cell 14:2929-2939
47. Voisin R, Minot JC, Esmenjaud D (1999) Penetration, development and emigration of juveniles of the nematode Meloidogyne arenaria in Myrobalan plum (Prunus cerasifera) clones bearing the Ma resistance genes. Eur J Plant Pathol 105:103-108
48. Vos P, Hogers R, Bleeker M, Reijans M, Van de Lee T, Hornes M, Frijers A, Pot J, Peleman J, Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407-4414
49. Williamson VM (1998) Root-knot nematode resistance genes in tomato and their potential for future use. Annu Rev Phytopathol 36:277-293
50. Yaghoobi I, Kaloshian I, Williamson VM (1995) Mapping a new nematode resistance locus in Lycopersicon peruvianum. Theor Appl Genet 91:457-464
51. Yamamoto T, Hayashi T (2002) New root-knot nematode resistance genes and their STS markers in peach. Sci Hortic 96:81-90
52. Young WP, Schupp JM, Kleim P (1999) DNA methylation and AFLP marker distribution in the soybean genome. Theor Appl Genet 99:785-790