Self-protection mechanism in D-cycloserine-producing Streptomyces lavendulae. Gene cloning, characterization, and kinetics of its alanine racemase and D-alanyl-D-alanine ligase, which are target enzymes of D-cycloserine

Journal of Biological Chemistry

Volumn 279, Issue 44, 2004, Pages 46143-46152

  Noda, Masafumi ^a   Kawahara, Yumi ^a   Ichikawa, Azusa ^a   Matoba, Yasuyuki ^a   Matsuo, Hiroaki ^a,b   Lee, Dong Geun ^a   Kumagai, Takanori ^a   Sugiyama, Masanori ^a  

^a HIROSHIMA UNIVERSITY   (Japan)

^b SHIMANE UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIOLOGY; BIOSYNTHESIS; CELLS; CLONING; ENZYMES; ESCHERICHIA COLI; FUNGI; REACTION KINETICS;

CELL WALLS; GENES ENCODING; SELF-PROTECTION MECHANISMS; STREPTOMYCES;

GENETIC ENGINEERING;

ALANINE RACEMASE; CYCLOSERINE; DEXTRO ALANYL DEXTRO ALANINE LIGASE; GENE PRODUCT; LIGASE; UNCLASSIFIED DRUG;

ALRS GENE; ANTIBIOTIC BIOSYNTHESIS; ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL CELL WALL; BACTERIAL GENE; COMPETITIVE INHIBITION; DDLS GENE; ENZYME INACTIVATION; ENZYME KINETICS; ESCHERICHIA COLI; MOLECULAR CLONING; NONHUMAN; PRIORITY JOURNAL; STREPTOMYCES LAVENDULAE;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; FUNGI; POSIBACTERIA; STREPTOMYCES; STREPTOMYCES LAVENDULAE;

EID: 8544274525     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M404603200     Document Type: Article

References (47)

1. Sammon, A. M. (1999) Postgrad. Med. J. 75, 129-132
2. Pablos-Mendez, A., Raviglione, M. C., Laszlo, A., Binkin, N., Rieder, H. L., Bustreo, F., Cohn, D. L., Lambregts-van Weezenbeek, C. S., Kim, S. J., Chaulet, P., and Nunn, P. (1998) N. Engl. J. Med. 338, 1641-1649
3. Heifets, L. B., and Iseman, M. D. (1991) Am. Rev. Respir. Dis. 144, 1-2
4. Johannesen, T. S., and Myhrer, T. (2002) Eur. J. Pharmacol. 437, 73-77
5. Andersen, J. M., Lindberg, V., and Myhrer, T. (2002) Behav. Brain Res. 129, 211-216
6. Schneider, J. S., Tinker, J. P., Van Velson, M., and Giardiniere, M. (2000) Brain Res. 860, 190-194
7. Walsh, C. T. (1989) J. Biol. Chem. 264, 2393-2396
8. Wasserman, S. A., Daub, E., Grisafi, P., Botstein, D., and Walsh, C. T. (1984) Biochemistry 23, 5182-5187
9. Esaki, N., and Walsh, C. T. (1986) Biochemistry 25, 3261-3267
10. Lilley, P. E., Stamford, N. P., Vasudevan, S. G., and Dixon, N. E. (1993) Gene 129, 9-16
11. Galakatos, N. G., Daub, E., Botstein, D., and Walsh, C. T. (1986) Biochemistry 25, 3255-3260
12. Neuhaus, F. C. (1962) J. Biol. Chem. 237, 778-786
13. Zawadzke, L. E., Bugg, T. D. H., and Walsh, C. T. (1991) Biochemistry 30, 1673-1682
14. Neuhaus, F. C., and Hammes, W. P. (1981) Pharmacol. Ther. 14, 265-319
15. Lambert, M. P., and Neuhaus, F. C. (1972) J. Bacteriol. 110, 978-987
16. Fenn, T. D., Stamper, G. F., Morollo, A. A., and Ringe, D. (2003) Biochemistry 42, 5775-5783
17. Peisach, D., Chipman, D. M., van Ophem, P. W., Manning, J. M., and Ringe, D. (1998) J. Am. Chem. Soc. 120, 2268-2274
18. Wang, E., and Walsh, C. (1978) Biochemistry 17, 1313-1321
19. Matsuo, H., Kumagai, T., Mori, K., and Sugiyama, M. (2003) J. Antibiot. 56, 762-767
20. Stober, C. K., Pham, X. Q., Erwin, A. L., Mizoguchi, S. D., Warrener, P., Hickey, M. J., Brinkman, F. S., Hufnagle, W. O., Kowalik, D. J., Lagrou, M., Garber, R. L., Goltry, L., Tolentino, E., Westbrock-Wadman, S., Yuan, Y., Brody, L. L., Coulter, S. N., Folger, K. R., Kas, A., Larbig, K., Lim, R., Smith, K., Spencer, D., Wong, G. K., Wu, Z., Paulsen, I. T., Reizer, J., Saier, M. H., Hancock, R. E., Lory, S., and Olson, M. V. (2000) Nature 406, 959-964
21. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd Ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
22. Bentley, S. D., Chater, K. F., Cerdeno-Tattaga, A. M., Challis, G. L., Thomson, N. R., James, K. D., Harris, D. E., Quail, M. A., Kieser, H., Harper, D., Bateman, A., Brown, S., Chandra, G., Chen, C. W., Collins, M., Cronin, A., Fraser, A., Goble, A., Hidalgo, J., Horncby, T., Howarth, S., Huang, C. H., Kieser, T., Larke, L., Murphy, L., Oliver, K., O'Neil, S., Rabbinowitsch, E., Rajandream, M. A., Rutherford, K., Rutter, S., Seeger, K., Saunders, D., Sharp, S., Squares, R., Squares, S., Taylor, K., Warren, T., Wietzorrek, A., Woodward, J., Barrell, B. G., Parkhill, J., and Hopwood, D. A. (2002) Nature 417, 141-147
23. Ikeda, K., Masujima, T., and Sugiyama, M. (1996) J. Biochem. 120, 1141-1145
24. Hopwood, D. A., Bidd, M. J., Chater, K. F., Kieser, T., Bruton, C. J., Kieser, H. M., Lydiate, D. J., Smith, C. P., Ward, J. M., and Schrempf, H. (1985) Genetic Manipulation of Streptomyces: A Laboratory Manual, John Innes Foundation, Norwich, UK
25. Bibb, M. J., Findlay, P. R., and Johnson, M. W. (1984) Gene 30, 157-166
26. Blattner, F. R., Plunkett, G., Bloch, C. A., Perna, N. T., Burland, V., Riley, M., Collado-Vides, J., Glanser, J. D., Rode, C. K., Mayhew, G. F., Gregor, J., Davis, N. W., Kirkpatrick, H. A., Goeden, M. A., Rose, D. J., Mau, B., and Shao, Y. (1997) Science 277, 1453-1474
27. Daub, E., Zawadzke, L. E., Botstein, D., and Walsh, C. T. (1988) Biochemistry 27, 3701-3708
28. Bradford, M. M. (1976) Anal. Biochem. 34, 248-254
29. Noda, M., Matoba, Y., Kumagai, T., and Sugiyama, M. (2004) J. Biol. Chem. 279, 46153-46161
30. Fan, C., Moews, P. C., Walsh, C. T., and Knox, J. R. (1994) Science 266, 439-443
31. Evers, S., Casadewall, B., Charles, M., Dutka-Malen, S., Galimand, M., and Courvalin, P. (1996) J. Mol. Evol. 42, 706-712
32. Dutka-Malen, S., Molinas, C., Arthur, M., and Courvalin, P. (1992) Gene 112, 53-58
33. Caceres, N. E., Harris, N. B., Wellehan, J. F., Feng, Z., Kapur, V., and Barletta, R. G. (1997) J. Bacteriol. 179, 5046-5055
34. Strych, U., Penland, R. L., Jimenez, M., Krause, K. L., and Benedik, M. J. (2001) FEMS Microbiol. Lett. 196, 93-98
35. Watanabe, A., Kurokawa, Y., Yoshimura, T., Soda, K., and Esaki, N. (1999) J. Biol. Chem. 274, 4189-4194
36. Shaw, J. P., Petsko, G. A., and Ringe, D. (1997) Biochemistry 36, 1329-1342
37. Watanabe, A., Kurokawa, Y., Yoshimura, T., and Esaki, N. (1999) J. Biochem. 125, 987-990
38. Yokoigawa, K., Okubo, Y., and Soda, K. (2003) FEMS Microbiol. Lett. 221, 263-267
39. Park, I. S., Lin, C. H., and Walsh, C. T. (1996) Biochemistry 35, 10464-10471
40. Park, I. S., Lin, C. H., and Walsh, C. T. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 10040-10044
41. Dutka-Malen, S., Molinas, C., Arthur, M., and Courvalin, P. (1990) Mol. Gen. Genet. 224, 364-372
42. Bugg, T. D. H., Dutka-Malen, S., Arthur, M., Courvalin, P., and Walsh, C. T. (1991) Biochemistry 30, 2017-2021
43. Ever, S., Reynolds, P. E., and Courvalin, P. (1994) Gene 140, 97-102
44. Meziane-Cherif, D., Badet-Denisot, M. A., Evers, S., Courvalin, P., and Badet, B. (1994) FEBS Lett. 354, 140-142
45. Nuehaus, F. C., Carpenter, C. V., Miller, J. L., Lee, M. N., Gragg, M., and Stichgold, R. A. (1969) Biochemistry 8, 5119-5124
46. Briggs, G. E., and Haldane, J. B. S. (1925) Biochem. J. 19, 338-339
47. Feng, Z., and Barletta, R. G. (2003) Antimicrob. Agents Chemother. 47, 283-291