메뉴 건너뛰기




Volumn , Issue , 2006, Pages 303-316

Computational complexities of combinatorial problems with applications to reverse engineering of biological networks

Author keywords

[No Author keywords available]

Indexed keywords


EID: 85115976597     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1142/9789812773920_0010     Document Type: Chapter
Times cited : (1)

References (18)
  • 2
    • 9644284380 scopus 로고    scopus 로고
    • Inference of signaling and gene regulatory networks by steady-state perturbation experiments: Structure and accuracy
    • M. Andrec, B. N. Kholodenko, R. M. Levy, and E. D. Sontag, “Inference of signaling and gene regulatory networks by steady-state perturbation experiments: Structure and accuracy, " J. Theoretical Biology, vol. 232, pp. 427-441, 2005.
    • (2005) J. Theoretical Biology , vol.232 , pp. 427-441
    • Andrec, M.1    Kholodenko, B.N.2    Levy, R.M.3    Sontag, E.D.4
  • 3
    • 26844438073 scopus 로고    scopus 로고
    • Approximating the online set multicover problems via randomized winnowing
    • Waterloo, Canada, Aug, (see also LNCS 3608, F. Dehne, A. Lopez-Ortiz, and J. R. Sack, Editors, Springer-Verlag, 2005.)
    • P. Berman and B. DasGupta, “Approximating the online set multicover problems via randomized winnowing, " Proc. 9th Workshop on Algorithms and Data Structures, Waterloo, Canada, Aug. 2005, pp. 110-121. (see also LNCS 3608, F. Dehne, A. Lopez-Ortiz, and J. R. Sack, Editors, Springer-Verlag, 2005.)
    • (2005) Proc. 9th Workshop on Algorithms and Data Structures , pp. 110-121
    • Berman, P.1    DasGupta, B.2
  • 4
    • 33645391692 scopus 로고    scopus 로고
    • Randomized approximation algorithms for set multicover problems with applications to reverse engineering of protein and gene networks
    • to appear in, special issue on computational molecular biology
    • P. Berman, B. DasGupta, and E. Sontag, “Randomized approximation algorithms for set multicover problems with applications to reverse engineering of protein and gene networks, " to appear in Discrete Applied Mathematics (special issue on computational molecular biology).
    • Discrete Applied Mathematics
    • Berman, P.1    DasGupta, B.2    Sontag, E.3
  • 5
    • 35048887511 scopus 로고    scopus 로고
    • Randomized approximation algorithms for set multicover problems with applications to reverse engineering of protein and gene networks
    • Cambridge, MA, Aug, (see also LNCS 3122, K. Jansen, S. Khanna, J. D. P. Rolim, and D. Ron, Editors, Springer Verlag, 2004)
    • P. Berman, B. DasGupta, and E. Sontag, “Randomized approximation algorithms for set multicover problems with applications to reverse engineering of protein and gene networks, " Proc. 7th International Workshop on Approximation Algorithms for Combinatorial Optimization Problems, Cambridge, MA, Aug. 2004, pp. 39-50. (see also LNCS 3122, K. Jansen, S. Khanna, J. D. P. Rolim, and D. Ron, Editors, Springer Verlag, 2004).
    • (2004) Proc. 7th International Workshop on Approximation Algorithms for Combinatorial Optimization Problems , pp. 39-50
    • Berman, P.1    DasGupta, B.2    Sontag, E.3
  • 6
    • 84918441630 scopus 로고
    • Geometrical and statistical properties of systems of linear inequalities with applications in pattern recognition
    • T. Cover, “Geometrical and statistical properties of systems of linear inequalities with applications in pattern recognition, " IEEE Trans. Electronic Computers, vol. EC-14, pp. 326-334, 1965.
    • (1965) IEEE Trans. Electronic Computers , vol.EC-14 , pp. 326-334
    • Cover, T.1
  • 7
    • 3142617691 scopus 로고    scopus 로고
    • Mathematical and computational techniques to deduce complex biochemical reaction mechanisms
    • E. J. Crampin, S. Schnell, and P. E. McSharry, “Mathematical and computational techniques to deduce complex biochemical reaction mechanisms, " Progress in Biophysics & Molecular Biology, vol. 86, pp. 77-112, 2004.
    • (2004) Progress in Biophysics & Molecular Biology , vol.86 , pp. 77-112
    • Crampin, E.J.1    Schnell, S.2    McSharry, P.E.3
  • 8
    • 51249181779 scopus 로고
    • A new polynomial-time algorithm for linear programming
    • N. Karmarkar, “A new polynomial-time algorithm for linear programming, " Combinatorica, vol. 4, pp. 373-395, 1984.
    • (1984) Combinatorica , vol.4 , pp. 373-395
    • Karmarkar, N.1
  • 10
    • 3242704801 scopus 로고    scopus 로고
    • Determination of functional network structure from local parameter dependence data
    • May
    • B. N. Kholodenko and E. D. Sontag, “Determination of functional network structure from local parameter dependence data, " Proc. arXiv physics/0205003, May 2002.
    • (2002) Proc. arXiv physics/0205003
    • Kholodenko, B.N.1    Sontag, E.D.2
  • 11
    • 0345871244 scopus 로고    scopus 로고
    • Theoretical and computational studies of the glucose signaling pathways in yeast using global gene expression data
    • X. Lin, C. A. Floudas, Y. Wang, and J. R. Broach, “Theoretical and computational studies of the glucose signaling pathways in yeast using global gene expression data, " Biotechnol Bioeng., vol. 84, pp. 864-886, 2003.
    • (2003) Biotechnol Bioeng. , vol.84 , pp. 864-886
    • Lin, X.1    Floudas, C.A.2    Wang, Y.3    Broach, J.R.4
  • 12
    • 34250091945 scopus 로고
    • Learning quickly when irrelevant attributes abound: A new linear-threshold algorithm
    • N. Littlestone, “Learning quickly when irrelevant attributes abound: A new linear-threshold algorithm, " Machine Learning, vol. 2, pp. 285-318, 1988.
    • (1988) Machine Learning , vol.2 , pp. 285-318
    • Littlestone, N.1
  • 14
    • 4244118371 scopus 로고
    • Theorie der Vielfachen Kontinuität (1852)
    • L. Schläfli, “Theorie der Vielfachen Kontinuität (1852), " Gesammelte Mathematische Abhandlungen, vol. 1, pp. 177-392, 1950.
    • (1950) Gesammelte Mathematische Abhandlungen , vol.1 , pp. 177-392
    • Schläfli, L.1
  • 15
    • 0036578795 scopus 로고    scopus 로고
    • Network motifs in the transcriptional regulation network of escherichia coli
    • S. Shen-Orr, R. Milo, S. Mangan, and U. Alon, “Network motifs in the transcriptional regulation network of escherichia coli, " Nature Genetics, vol. 31, pp 64-68, 2002.
    • (2002) Nature Genetics , vol.31 , pp. 64-68
    • Shen-Orr, S.1    Milo, R.2    Mangan, S.3    Alon, U.4
  • 16
    • 4444226267 scopus 로고    scopus 로고
    • Inferring dynamic architecture of cellular networks using time series of gene expression, protein and metabolite data
    • E. D. Sontag, A. Kiyatkin, and B. N. Kholodenko, “Inferring dynamic architecture of cellular networks using time series of gene expression, protein and metabolite data, " Bioinformatics, vol. 20, pp. 1877-1886, 2004.
    • (2004) Bioinformatics , vol.20 , pp. 1877-1886
    • Sontag, E.D.1    Kiyatkin, A.2    Kholodenko, B.N.3
  • 17
    • 0009846660 scopus 로고    scopus 로고
    • VC dimension of neural networks
    • in, M. Bishop, ed., Berlin: Springer-Verlag
    • E. D. Sontag, “VC dimension of neural networks, " in Neural Networks and Machine Learning, C. M. Bishop, ed., Berlin: Springer-Verlag, pp. 69-95, 1998.
    • (1998) Neural Networks and Machine Learning, C. , pp. 69-95
    • Sontag, E.D.1
  • 18
    • 0038094430 scopus 로고    scopus 로고
    • From the top down: Towards a predictive biology of signalling networks
    • J. Stark, R. Callard, and M. Hubank, “From the top down: Towards a predictive biology of signalling networks, " Trends Biotechnol., vol. 21, pp. 290-293, 2003.
    • (2003) Trends Biotechnol. , vol.21 , pp. 290-293
    • Stark, J.1    Callard, R.2    Hubank, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.