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Volumn , Issue , 2007, Pages 93-106

High-throughput primer and probe design

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EID: 85077276043     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter
Times cited : (26)

References (12)
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    • SIMPLE34: an improved and enhanced implementation for VAX and Sun computers of the SIMPLE algorithm for analysis of clustered repetitive motifs in nucleotide sequences
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    • Hancock, J.M.1    Armstrong, J.S.2
  • 4
    • 0026698636 scopus 로고
    • Extension of base mispairs by Taq DNA polymerase: implications for single nucleotide discrimination in PCR
    • Huang MM, Arnheim N, Goodman MF (1992) Extension of base mispairs by Taq DNA polymerase: implications for single nucleotide discrimination in PCR. Nucleic Acids Res 20: 4567-4573.
    • (1992) Nucleic Acids Res , vol.20 , pp. 4567-4573
    • Huang, M.M.1    Arnheim, N.2    Goodman, M.F.3
  • 7
    • 0032539693 scopus 로고    scopus 로고
    • A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
    • SantaLucia J, Jr (1998) A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc Natl Acad Sci USA 95: 1460-1465.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 1460-1465
    • SantaLucia, J.1
  • 8
    • 0029670262 scopus 로고    scopus 로고
    • Molecular beacons: probes that fluoresce upon hybridization
    • Tyagi S, Kramer FR (1996) Molecular beacons: probes that fluoresce upon hybridization. Nat Biotechnol 14: 303-308.
    • (1996) Nat Biotechnol , vol.14 , pp. 303-308
    • Tyagi, S.1    Kramer, F.R.2
  • 9
    • 0034771194 scopus 로고    scopus 로고
    • Oligonucleotide melting temperatures under PCR conditions: nearest-neighbor corrections for Mg(2+), deoxynucleotide triphosphate, and dimethyl sulfoxide concentrations with comparison to alternative empirical formulas
    • von Ahsen N, Wittwer CT, Schutz E (2001) Oligonucleotide melting temperatures under PCR conditions: nearest-neighbor corrections for Mg(2+), deoxynucleotide triphosphate, and dimethyl sulfoxide concentrations with comparison to alternative empirical formulas. Clin Chem 47: 1956-1961.
    • (2001) Clin Chem , vol.47 , pp. 1956-1961
    • von Ahsen, N.1    Wittwer, C.T.2    Schutz, E.3
  • 10
    • 85074914953 scopus 로고    scopus 로고
    • A PCR primer bank for quantitative gene expression analysis
    • Wang X, Seed B (2003a) A PCR primer bank for quantitative gene expression analysis. Nucleic Acids Res 31: e154.
    • (2003) Nucleic Acids Res , vol.31
    • Wang, X.1    Seed, B.2
  • 11
    • 0037958765 scopus 로고    scopus 로고
    • Selection of oligonucleotide probes for protein coding sequences
    • Wang X, Seed B (2003b) Selection of oligonucleotide probes for protein coding sequences. Bioinformatics 19: 796-802.
    • (2003) Bioinformatics , vol.19 , pp. 796-802
    • Wang, X.1    Seed, B.2
  • 12
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31: 3406-3415.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3406-3415
    • Zuker, M.1


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