NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats

Microbial genomics

Volumn 2, Issue 8, 2016, Pages e000074-

  Sahl, Jason W ^a,b   Lemmer, Darrin ^a   Travis, Jason ^a   Schupp, James M ^a   Gillece, John D ^a   Aziz, Maliha ^c   Driebe, Elizabeth M ^a   Drees, Kevin P ^d   Hicks, Nathan D ^e   Williamson, Charles Hall Davis ^b   Hepp, Crystal M ^b   Smith, David Earl ^a   Roe, Chandler ^a   Engelthaler, David M ^a   Wagner, David M ^b   Keim, Paul ^b  

^a TRANSLATIONAL GENOMICS RESEARCH INSTITUTE   (United States)

^b NORTHERN ARIZONA UNIVERSITY   (United States)

^c GEORGE WASHINGTON UNIVERSITY   (United States)

^d UNIVERSITY OF NEW HAMPSHIRE   (United States)

^e HARVARD UNIVERSITY   (United States)

Author keywords

bioinformatics; Phylogeography; SNPs

Indexed keywords

BACTERIAL GENOME; COMPUTER SIMULATION; DNA SEQUENCE; GENETICS; GENOMICS; MOLECULAR EPIDEMIOLOGY; PHYLOGENY; PROCEDURES; SINGLE NUCLEOTIDE POLYMORPHISM; SOFTWARE; WHOLE GENOME SEQUENCING;

COMPUTER SIMULATION; GENOME, BACTERIAL; GENOMICS; MOLECULAR EPIDEMIOLOGY; PHYLOGENY; POLYMORPHISM, SINGLE NUCLEOTIDE; SEQUENCE ANALYSIS, DNA; SOFTWARE; WHOLE GENOME SEQUENCING;

EID: 85045985271     PISSN: 20575858     EISSN: None     Source Type: Journal    
DOI: 10.1099/mgen.0.000074     Document Type: Article

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