Comparison of bacterial genome assembly software for MinION data and their applicability to medical microbiology

Microbial genomics

Volumn 2, Issue 9, 2016, Pages e000085-

  Judge, Kim ^a   Hunt, Martin ^b   Reuter, Sandra ^a   Tracey, Alan ^b   Quail, Michael A ^b   Parkhill, Julian ^b   Peacock, Sharon J ^c  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^c LONDON SCHOOL OF HYGIENE AND TROPICAL MEDICINE   (United Kingdom)

Author keywords

antimicrobial resistance; assembly; long reads; MinION; plasmid; software

Indexed keywords

BACTERIAL GENOME; BIOLOGY; DNA SEQUENCE; ENTEROBACTER; GENETICS; HIGH THROUGHPUT SEQUENCING; MICROBIOLOGY; PLASMID; PROCEDURES; SOFTWARE; STANDARDS; TRENDS;

COMPUTATIONAL BIOLOGY; ENTEROBACTER; GENOME, BACTERIAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MICROBIOLOGY; PLASMIDS; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 85045965555     PISSN: 20575858     EISSN: None     Source Type: Journal    
DOI: 10.1099/mgen.0.000085     Document Type: Article

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