EMHP: An accurate automated hole masking algorithm for single-particle cryo-EM image processing

Bioinformatics

Volumn 33, Issue 23, 2017, Pages 3824-3826

  Berndsen, Zachary ^a   Bowman, Charles ^a   Jang, Haerin ^a   Ward, Andrew B ^a  

^a SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

ALGORITHM; AUTOMATED PATTERN RECOGNITION; CHEMISTRY; CRYOELECTRON MICROSCOPY; IMAGE PROCESSING; PROCEDURES;

ALGORITHMS; CRYOELECTRON MICROSCOPY; IMAGE PROCESSING, COMPUTER-ASSISTED; PATTERN RECOGNITION, AUTOMATED; PROTEINS;

EID: 85042119287     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btx500     Document Type: Article

References (6)

1. Kimanius, D. et al. (2016) Accelerated cryo-EM structure determination with parallelisation using GPUs in RELION-2. eLife, 55, e18722.
2. Lander, G.C. et al. (2009) Appion: an integrated, database-driven pipeline to facilitate EM image processing. J. Struct. Biol., 166, 95–102.
3. Lee, J.H. et al. (2016) Cryo-EM structure of a native, fully glycosylated, cleaved HIV-1 envelope trimer. Science, 351, 1043–1048.
4. Suloway, C. et al. (2005) Automated molecular microscopy: the new Leginon system. J. Struct. Biol., 151, 41–60.
5. Tang, G. et al. (2007) EMAN2: an extensible image processing suite for electron microscopy. J. Struct. Biol., 157, 38–46.
6. Voss, N.R. et al. (2009) DoG Picker and TiltPicker: software tools to facilitate particle selection in single particle electron microscopy. J. Struct. Biol., 166, 205–213.